RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 NFATC2IPQ8NCF5 419 aa26.68■■□□□ 1.86
RAP1B-223ENST00000541167 CASZ1Q86V15 1759 aa26.67■■□□□ 1.86
RAP1B-223ENST00000541167 ZNF827Q17R98 1081 aa26.67■■□□□ 1.86
RAP1B-223ENST00000541167 SLC52A2Q9HAB3 445 aa26.67■■□□□ 1.86
RAP1B-223ENST00000541167 QSER1Q2KHR3 1735 aa26.67■■□□□ 1.86
RAP1B-223ENST00000541167 DLG5Q8TDM6 1919 aa26.67■■□□□ 1.86
RAP1B-223ENST00000541167 LOC102724428A0A0B4J2F2 783 aa26.65■■□□□ 1.86
RAP1B-223ENST00000541167 SIK1P57059 783 aa26.65■■□□□ 1.86
RAP1B-223ENST00000541167 PNNQ9H307 717 aaKnown RBP26.65■■□□□ 1.86
RAP1B-223ENST00000541167 MAPK8IP3Q9UPT6 1336 aa26.64■■□□□ 1.85
RAP1B-223ENST00000541167 SIPA1L3O60292 1781 aaPredicted RBP26.63■■□□□ 1.85
RAP1B-223ENST00000541167 C4BP0C0L5 1744 aa26.63■■□□□ 1.85
RAP1B-223ENST00000541167 ANP32CO43423 234 aa26.63■■□□□ 1.85
RAP1B-223ENST00000541167 WDR43Q15061 677 aaKnown RBP eCLIP26.63■■□□□ 1.85
RAP1B-223ENST00000541167 AKT1S1Q96B36 256 aa26.63■■□□□ 1.85
RAP1B-223ENST00000541167 LRP5O75197 1615 aa26.63■■□□□ 1.85
RAP1B-223ENST00000541167 ZNF831Q5JPB2 1677 aa26.63■■□□□ 1.85
RAP1B-223ENST00000541167 PLEKHF1Q96S99 279 aa26.62■■□□□ 1.85
RAP1B-223ENST00000541167 HMGB2P26583 209 aaKnown RBP26.61■■□□□ 1.85
RAP1B-223ENST00000541167 IL17REQ8NFR9 667 aa26.61■■□□□ 1.85
RAP1B-223ENST00000541167 RBM42Q9BTD8 480 aaKnown RBP26.61■■□□□ 1.85
RAP1B-223ENST00000541167 ATP6V1AP38606 617 aa26.6■■□□□ 1.85
RAP1B-223ENST00000541167 TEFQ10587 303 aa26.6■■□□□ 1.85
RAP1B-223ENST00000541167 RTF1Q92541 710 aaKnown RBP26.59■■□□□ 1.85
RAP1B-223ENST00000541167 TFCP2L1Q9NZI6 479 aa26.59■■□□□ 1.85
RAP1B-223ENST00000541167 PDGFDQ9GZP0 370 aaPredicted RBP26.58■■□□□ 1.85
RAP1B-223ENST00000541167 COL5A3P25940 1745 aaPredicted RBP26.58■■□□□ 1.85
RAP1B-223ENST00000541167 CEMIPQ8WUJ3 1361 aa26.58■■□□□ 1.84
RAP1B-223ENST00000541167 ITPK1Q13572 414 aa26.57■■□□□ 1.84
RAP1B-223ENST00000541167 TJP1Q07157 1748 aa26.56■■□□□ 1.84
RAP1B-223ENST00000541167 UBR2Q8IWV8 1755 aa26.56■■□□□ 1.84
RAP1B-223ENST00000541167 PTCD1O75127 700 aaKnown RBP26.56■■□□□ 1.84
RAP1B-223ENST00000541167 UBR3Q6ZT12 1888 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 SLC39A6Q13433 755 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 NFE2L2Q16236 605 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 MCM10Q7L590 875 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 LINC00116Q8NCU8 138 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 AK7Q96M32 723 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 SLC4A9Q96Q91 983 aa26.55■■□□□ 1.84
RAP1B-223ENST00000541167 CICQ96RK0 1608 aaPredicted RBP26.54■■□□□ 1.84
RAP1B-223ENST00000541167 HTATSF1O43719 755 aaKnown RBP26.54■■□□□ 1.84
RAP1B-223ENST00000541167 PNPLA7Q6ZV29 1317 aa26.54■■□□□ 1.84
RAP1B-223ENST00000541167 KCPQ6ZWJ8 1503 aa26.54■■□□□ 1.84
RAP1B-223ENST00000541167 DCTN1Q14203 1278 aa26.53■■□□□ 1.84
RAP1B-223ENST00000541167 CCDC146Q8IYE0 955 aa26.53■■□□□ 1.84
RAP1B-223ENST00000541167 ADAMTS8Q9UP79 889 aa26.53■■□□□ 1.84
RAP1B-223ENST00000541167 ZBTB7AO95365 584 aa26.52■■□□□ 1.84
RAP1B-223ENST00000541167 CCDC184Q52MB2 194 aa26.51■■□□□ 1.83
RAP1B-223ENST00000541167 TTC5Q8N0Z6 440 aa26.51■■□□□ 1.83
RAP1B-223ENST00000541167 SPON1Q9HCB6 807 aa26.51■■□□□ 1.83
RAP1B-223ENST00000541167 RUNDC1Q96C34 613 aa26.49■■□□□ 1.83
RAP1B-223ENST00000541167 MSH5O43196 834 aa26.48■■□□□ 1.83
RAP1B-223ENST00000541167 MYH14Q7Z406 1995 aaKnown RBP26.47■■□□□ 1.83
RAP1B-223ENST00000541167 BTBD11A6QL63 1104 aa26.47■■□□□ 1.83
RAP1B-223ENST00000541167 GNPATO15228 680 aa26.47■■□□□ 1.83
RAP1B-223ENST00000541167 MTFR1LQ9H019 292 aa26.47■■□□□ 1.83
RAP1B-223ENST00000541167 MRS2Q9HD23 443 aa26.47■■□□□ 1.83
RAP1B-223ENST00000541167 ATF5Q9Y2D1 282 aaPredicted RBP26.47■■□□□ 1.83
RAP1B-223ENST00000541167 PHF14O94880 888 aa26.46■■□□□ 1.83
RAP1B-223ENST00000541167 RIPK4P57078 832 aa26.46■■□□□ 1.83
RAP1B-223ENST00000541167 ZNF790Q6PG37 636 aa26.46■■□□□ 1.83
RAP1B-223ENST00000541167 COL23A1Q86Y22 540 aaPredicted RBP26.46■■□□□ 1.83
RAP1B-223ENST00000541167 FLAD1Q8NFF5 587 aa26.46■■□□□ 1.83
RAP1B-223ENST00000541167 CNTNAP4Q9C0A0 1308 aa26.45■■□□□ 1.83
RAP1B-223ENST00000541167 TMPOP42166 694 aaKnown RBP26.45■■□□□ 1.82
RAP1B-223ENST00000541167 AMIGO3Q86WK7 504 aa26.44■■□□□ 1.82
RAP1B-223ENST00000541167 DNAJC10Q8IXB1 793 aa26.44■■□□□ 1.82
RAP1B-223ENST00000541167 SLC16A10Q8TF71 515 aa26.44■■□□□ 1.82
RAP1B-223ENST00000541167 RRP7AQ9Y3A4 280 aaKnown RBP26.44■■□□□ 1.82
RAP1B-223ENST00000541167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.43■■□□□ 1.82
RAP1B-223ENST00000541167 THUMPD2Q9BTF0 503 aaKnown RBP26.43■■□□□ 1.82
RAP1B-223ENST00000541167 KDM3BQ7LBC6 1761 aa26.43■■□□□ 1.82
RAP1B-223ENST00000541167 SSFA2P28290 1259 aa26.42■■□□□ 1.82
RAP1B-223ENST00000541167 LMOD3Q0VAK6 560 aa26.42■■□□□ 1.82
RAP1B-223ENST00000541167 NEUROD2Q15784 382 aa26.42■■□□□ 1.82
RAP1B-223ENST00000541167 RC3H1Q5TC82 1133 aaKnown RBP26.42■■□□□ 1.82
RAP1B-223ENST00000541167 SMIM5Q71RC9 77 aa26.42■■□□□ 1.82
RAP1B-223ENST00000541167 VSIG10Q8N0Z9 540 aa26.42■■□□□ 1.82
RAP1B-223ENST00000541167 ZNF496Q96IT1 587 aaPredicted RBP26.42■■□□□ 1.82
RAP1B-223ENST00000541167 COL24A1Q17RW2 1714 aa26.42■■□□□ 1.82
RAP1B-223ENST00000541167 KCNQ3O43525 872 aa26.41■■□□□ 1.82
RAP1B-223ENST00000541167 CRKLP46109 303 aaKnown RBP26.41■■□□□ 1.82
RAP1B-223ENST00000541167 TAF7Q15545 349 aaPredicted RBP26.41■■□□□ 1.82
RAP1B-223ENST00000541167 PPP1R1BQ9UD71 204 aaPredicted RBP26.41■■□□□ 1.82
RAP1B-223ENST00000541167 RTCBQ9Y3I0 505 aaKnown RBP26.41■■□□□ 1.82
RAP1B-223ENST00000541167 HEG1Q9ULI3 1381 aa26.41■■□□□ 1.82
RAP1B-223ENST00000541167 FMNL2Q96PY5 1086 aa26.4■■□□□ 1.82
RAP1B-223ENST00000541167 C4AP0C0L4 1744 aa26.39■■□□□ 1.81
RAP1B-223ENST00000541167 PTGER2P43116 358 aa26.38■■□□□ 1.81
RAP1B-223ENST00000541167 RPS6KA4O75676 772 aa26.37■■□□□ 1.81
RAP1B-223ENST00000541167 CYP19A1P11511 503 aaPredicted RBP26.37■■□□□ 1.81
RAP1B-223ENST00000541167 PNISRQ8TF01 805 aaKnown RBP26.37■■□□□ 1.81
RAP1B-223ENST00000541167 CCDC87Q9NVE4 849 aa26.36■■□□□ 1.81
RAP1B-223ENST00000541167 MIS18AQ9NYP9 233 aa26.36■■□□□ 1.81
RAP1B-223ENST00000541167 TRAPPC3LQ5T215 181 aa26.35■■□□□ 1.81
RAP1B-223ENST00000541167 MSL1Q68DK7 614 aa26.35■■□□□ 1.81
RAP1B-223ENST00000541167 INTS5Q6P9B9 1019 aaKnown RBP26.35■■□□□ 1.81
RAP1B-223ENST00000541167 SGIP1Q9BQI5 828 aa26.35■■□□□ 1.81
RAP1B-223ENST00000541167 APAF1O14727 1248 aa26.34■■□□□ 1.81
RAP1B-223ENST00000541167 STARD3NLO95772 234 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms