RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
CLDN2-202ENST00000540876 FOXD4L5Q5VV16 416 aaPredicted RBP11.76□□□□□ -0.53
CLDN2-202ENST00000540876 FOXD4L4Q8WXT5 416 aaPredicted RBP11.76□□□□□ -0.53
CLDN2-202ENST00000540876 CDK19Q9BWU1 502 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 ST7Q9NRC1 585 aa11.76□□□□□ -0.53
CLDN2-202ENST00000540876 ADCY5O95622 1261 aa11.75□□□□□ -0.53
CLDN2-202ENST00000540876 SLC12A5Q9H2X9 1139 aa11.75□□□□□ -0.53
CLDN2-202ENST00000540876 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
CLDN2-202ENST00000540876 BANK1Q8NDB2 785 aa11.75□□□□□ -0.53
CLDN2-202ENST00000540876 RASSF4Q9H2L5 321 aa11.74□□□□□ -0.53
CLDN2-202ENST00000540876 TOMM22Q9NS69 142 aa11.74□□□□□ -0.53
CLDN2-202ENST00000540876 STRCQ7RTU9 1775 aa11.74□□□□□ -0.53
CLDN2-202ENST00000540876 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
CLDN2-202ENST00000540876 DHX16O60231 1041 aaKnown RBP11.74□□□□□ -0.53
CLDN2-202ENST00000540876 GPATCH11Q8N954 259 aa11.74□□□□□ -0.53
CLDN2-202ENST00000540876 SIRT1Q96EB6 747 aa11.74□□□□□ -0.53
CLDN2-202ENST00000540876 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
CLDN2-202ENST00000540876 PYCARDQ9ULZ3 195 aa11.73□□□□□ -0.53
CLDN2-202ENST00000540876 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
CLDN2-202ENST00000540876 KIAA1524Q8TCG1 905 aa11.73□□□□□ -0.53
CLDN2-202ENST00000540876 NPC1L1Q9UHC9 1359 aa11.72□□□□□ -0.53
CLDN2-202ENST00000540876 GYS2P54840 703 aa11.72□□□□□ -0.53
CLDN2-202ENST00000540876 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
CLDN2-202ENST00000540876 C10orf67Q8IYJ2 551 aa11.72□□□□□ -0.53
CLDN2-202ENST00000540876 NOL10Q9BSC4 688 aaKnown RBP11.72□□□□□ -0.53
CLDN2-202ENST00000540876 EVC2Q86UK5 1308 aa11.72□□□□□ -0.53
CLDN2-202ENST00000540876 LAMC1P11047 1609 aa11.71□□□□□ -0.53
CLDN2-202ENST00000540876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLDN2-202ENST00000540876 CABP1Q9NZU7 370 aa11.71□□□□□ -0.53
CLDN2-202ENST00000540876 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.54
CLDN2-202ENST00000540876 MBD3O95983 291 aa11.71□□□□□ -0.54
CLDN2-202ENST00000540876 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.54
CLDN2-202ENST00000540876 ARHGEF28Q8N1W1 1705 aaKnown RBP11.71□□□□□ -0.54
CLDN2-202ENST00000540876 CYP2C19P33261 490 aa11.7□□□□□ -0.54
CLDN2-202ENST00000540876 ICE2Q659A1 982 aa11.7□□□□□ -0.54
CLDN2-202ENST00000540876 CYP2E1P05181 493 aaPredicted RBP11.7□□□□□ -0.54
CLDN2-202ENST00000540876 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
CLDN2-202ENST00000540876 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
CLDN2-202ENST00000540876 SYCP1Q15431 976 aa11.7□□□□□ -0.54
CLDN2-202ENST00000540876 CT47A1Q5JQC4 288 aaPredicted RBP11.7□□□□□ -0.54
CLDN2-202ENST00000540876 SPC24Q8NBT2 197 aa11.7□□□□□ -0.54
CLDN2-202ENST00000540876 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
CLDN2-202ENST00000540876 TRIM66O15016 1216 aa11.69□□□□□ -0.54
CLDN2-202ENST00000540876 RARSP54136 660 aaKnown RBP11.69□□□□□ -0.54
CLDN2-202ENST00000540876 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
CLDN2-202ENST00000540876 C16orf45Q96MC5 204 aaPredicted RBP11.69□□□□□ -0.54
CLDN2-202ENST00000540876 TECPR2O15040 1411 aa11.69□□□□□ -0.54
CLDN2-202ENST00000540876 NUDT16Q96DE0 195 aaKnown RBP11.69□□□□□ -0.54
CLDN2-202ENST00000540876 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
CLDN2-202ENST00000540876 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 GOLGA6L6A8MZA4 724 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 KMT5BQ4FZB7 885 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 CCDC112Q8NEF3 446 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 ZNF397Q8NF99 534 aaPredicted RBP11.68□□□□□ -0.54
CLDN2-202ENST00000540876 SYAP1Q96A49 352 aaPredicted RBP11.68□□□□□ -0.54
CLDN2-202ENST00000540876 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLDN2-202ENST00000540876 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
CLDN2-202ENST00000540876 SMTNL1A8MU46 457 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 UVSSAQ2YD98 709 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 SYT10Q6XYQ8 523 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
CLDN2-202ENST00000540876 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 PIK3R4Q99570 1358 aa11.68□□□□□ -0.54
CLDN2-202ENST00000540876 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
CLDN2-202ENST00000540876 CTR9Q6PD62 1173 aa11.67□□□□□ -0.54
CLDN2-202ENST00000540876 FAM135BQ49AJ0 1406 aa11.67□□□□□ -0.54
CLDN2-202ENST00000540876 FAM184AQ8NB25 1140 aa11.67□□□□□ -0.54
CLDN2-202ENST00000540876 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
CLDN2-202ENST00000540876 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
CLDN2-202ENST00000540876 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.67□□□□□ -0.54
CLDN2-202ENST00000540876 CASQ1P31415 396 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 MVPQ14764 893 aaKnown RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 TMED8Q6PL24 325 aaPredicted RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 DDX17Q92841 729 aaKnown RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 ZDHHC9Q9Y397 364 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 FOXD4L6Q3SYB3 417 aaPredicted RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 FOXD4L3Q6VB84 417 aaPredicted RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 CREBRFQ8IUR6 639 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 ZNF592Q92610 1267 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 CARD10Q9BWT7 1032 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 PHF14O94880 888 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 RRP7AQ9Y3A4 280 aaKnown RBP11.66□□□□□ -0.54
CLDN2-202ENST00000540876 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 DIP2AQ14689 1571 aa11.66□□□□□ -0.54
CLDN2-202ENST00000540876 STRCP1A6NGW2 1772 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 PTCH1Q13635 1447 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 MYO1CO00159 1063 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 REC8O95072 547 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 TNNT1P13805 278 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 RBM6P78332 1123 aaKnown RBP11.65□□□□□ -0.54
CLDN2-202ENST00000540876 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 KRBA2Q6ZNG9 492 aa11.65□□□□□ -0.54
CLDN2-202ENST00000540876 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.65□□□□□ -0.54
CLDN2-202ENST00000540876 CPS1P31327 1500 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms