RNA–Protein interactions for RNA: ENST00000540712.1

LRR1-203, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,597 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-203ENST00000540712 SCN11AQ9UI33 1791 aa20.07■□□□□ 0.8
LRR1-203ENST00000540712 CCER2I3L3R5 266 aa20.07■□□□□ 0.8
LRR1-203ENST00000540712 HMGB2P26583 209 aaKnown RBP20.07■□□□□ 0.8
LRR1-203ENST00000540712 TMPOP42166 694 aaKnown RBP20.07■□□□□ 0.8
LRR1-203ENST00000540712 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
LRR1-203ENST00000540712 MCM10Q7L590 875 aa20.07■□□□□ 0.8
LRR1-203ENST00000540712 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
LRR1-203ENST00000540712 ASAP1Q9ULH1 1129 aa20.07■□□□□ 0.8
LRR1-203ENST00000540712 PROM2Q8N271 834 aa20.06■□□□□ 0.8
LRR1-203ENST00000540712 ATG3Q9NT62 314 aa20.06■□□□□ 0.8
LRR1-203ENST00000540712 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
LRR1-203ENST00000540712 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
LRR1-203ENST00000540712 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
LRR1-203ENST00000540712 CEMIPQ8WUJ3 1361 aa20.05■□□□□ 0.8
LRR1-203ENST00000540712 MRC1P22897 1456 aa20.04■□□□□ 0.8
LRR1-203ENST00000540712 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
LRR1-203ENST00000540712 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
LRR1-203ENST00000540712 APAF1O14727 1248 aa20.03■□□□□ 0.8
LRR1-203ENST00000540712 TTC5Q8N0Z6 440 aa20.03■□□□□ 0.8
LRR1-203ENST00000540712 RREB1Q92766 1687 aa20.02■□□□□ 0.8
LRR1-203ENST00000540712 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.8
LRR1-203ENST00000540712 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.8
LRR1-203ENST00000540712 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
LRR1-203ENST00000540712 SIK1P57059 783 aa20.02■□□□□ 0.8
LRR1-203ENST00000540712 MIER1Q8N108 512 aa20.01■□□□□ 0.79
LRR1-203ENST00000540712 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
LRR1-203ENST00000540712 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
LRR1-203ENST00000540712 ATP6V1AP38606 617 aa20■□□□□ 0.79
LRR1-203ENST00000540712 KCNQ4P56696 695 aa20■□□□□ 0.79
LRR1-203ENST00000540712 SLC39A6Q13433 755 aa20■□□□□ 0.79
LRR1-203ENST00000540712 STK32BQ9NY57 414 aa20■□□□□ 0.79
LRR1-203ENST00000540712 VIRMAQ69YN4 1812 aaKnown RBP20■□□□□ 0.79
LRR1-203ENST00000540712 TAF7Q15545 349 aaPredicted RBP20■□□□□ 0.79
LRR1-203ENST00000540712 LY75O60449 1722 aa19.99■□□□□ 0.79
LRR1-203ENST00000540712 DLG5Q8TDM6 1919 aa19.98■□□□□ 0.79
LRR1-203ENST00000540712 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
LRR1-203ENST00000540712 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
LRR1-203ENST00000540712 NUP188Q5SRE5 1749 aa19.98■□□□□ 0.79
LRR1-203ENST00000540712 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
LRR1-203ENST00000540712 SLC15A2Q16348 729 aa19.95■□□□□ 0.78
LRR1-203ENST00000540712 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
LRR1-203ENST00000540712 ANO8Q9HCE9 1232 aaPredicted RBP19.95■□□□□ 0.78
LRR1-203ENST00000540712 CALD1Q05682 793 aaKnown RBP19.94■□□□□ 0.78
LRR1-203ENST00000540712 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
LRR1-203ENST00000540712 VSIG10Q8N0Z9 540 aa19.93■□□□□ 0.78
LRR1-203ENST00000540712 AK7Q96M32 723 aa19.93■□□□□ 0.78
LRR1-203ENST00000540712 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
LRR1-203ENST00000540712 TFCP2L1Q9NZI6 479 aa19.93■□□□□ 0.78
LRR1-203ENST00000540712 ITPK1Q13572 414 aa19.92■□□□□ 0.78
LRR1-203ENST00000540712 SLC4A9Q96Q91 983 aa19.92■□□□□ 0.78
LRR1-203ENST00000540712 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
LRR1-203ENST00000540712 SIPA1L3O60292 1781 aaPredicted RBP19.92■□□□□ 0.78
LRR1-203ENST00000540712 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
LRR1-203ENST00000540712 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
LRR1-203ENST00000540712 ZNF827Q17R98 1081 aa19.91■□□□□ 0.78
LRR1-203ENST00000540712 LINC00116Q8NCU8 138 aa19.91■□□□□ 0.78
LRR1-203ENST00000540712 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
LRR1-203ENST00000540712 ZNF496Q96IT1 587 aaPredicted RBP19.91■□□□□ 0.78
LRR1-203ENST00000540712 BABAM1Q9NWV8 329 aa19.91■□□□□ 0.78
LRR1-203ENST00000540712 LAS1LQ9Y4W2 734 aaKnown RBP19.91■□□□□ 0.78
LRR1-203ENST00000540712 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
LRR1-203ENST00000540712 NCBP3Q53F19 620 aaKnown RBP19.91■□□□□ 0.78
LRR1-203ENST00000540712 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
LRR1-203ENST00000540712 KCNQ3O43525 872 aa19.9■□□□□ 0.78
LRR1-203ENST00000540712 TEX13AQ9BXU3 409 aaPredicted RBP19.9■□□□□ 0.78
LRR1-203ENST00000540712 SALL2Q9Y467 1007 aaPredicted RBP19.9■□□□□ 0.78
LRR1-203ENST00000540712 C5P01031 1676 aa19.9■□□□□ 0.78
LRR1-203ENST00000540712 HEG1Q9ULI3 1381 aa19.89■□□□□ 0.77
LRR1-203ENST00000540712 NGEFQ8N5V2 710 aa19.89■□□□□ 0.77
LRR1-203ENST00000540712 STARD3NLO95772 234 aa19.88■□□□□ 0.77
LRR1-203ENST00000540712 DNAJC10Q8IXB1 793 aa19.88■□□□□ 0.77
LRR1-203ENST00000540712 ZNF831Q5JPB2 1677 aa19.88■□□□□ 0.77
LRR1-203ENST00000540712 RC3H1Q5TC82 1133 aaKnown RBP19.87■□□□□ 0.77
LRR1-203ENST00000540712 LRP5O75197 1615 aa19.87■□□□□ 0.77
LRR1-203ENST00000540712 GNPATO15228 680 aa19.87■□□□□ 0.77
LRR1-203ENST00000540712 SNRPA1P09661 255 aaKnown RBP19.87■□□□□ 0.77
LRR1-203ENST00000540712 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
LRR1-203ENST00000540712 FLAD1Q8NFF5 587 aa19.87■□□□□ 0.77
LRR1-203ENST00000540712 CFAP44Q96MT7 982 aa19.87■□□□□ 0.77
LRR1-203ENST00000540712 C4BP0C0L5 1744 aa19.87■□□□□ 0.77
LRR1-203ENST00000540712 CNTNAP4Q9C0A0 1308 aa19.86■□□□□ 0.77
LRR1-203ENST00000540712 UBR2Q8IWV8 1755 aa19.86■□□□□ 0.77
LRR1-203ENST00000540712 CRKLP46109 303 aaKnown RBP19.86■□□□□ 0.77
LRR1-203ENST00000540712 GNAI1P63096 354 aa19.86■□□□□ 0.77
LRR1-203ENST00000540712 IFT57Q9NWB7 429 aa19.86■□□□□ 0.77
LRR1-203ENST00000540712 TAF1LQ8IZX4 1826 aa19.86■□□□□ 0.77
LRR1-203ENST00000540712 CHL1O00533 1208 aa19.85■□□□□ 0.77
LRR1-203ENST00000540712 MSH5O43196 834 aa19.85■□□□□ 0.77
LRR1-203ENST00000540712 EIF4A1P60842 406 aaKnown RBP19.85■□□□□ 0.77
LRR1-203ENST00000540712 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
LRR1-203ENST00000540712 PHF14O94880 888 aa19.84■□□□□ 0.77
LRR1-203ENST00000540712 CYP19A1P11511 503 aaPredicted RBP19.84■□□□□ 0.77
LRR1-203ENST00000540712 SSFA2P28290 1259 aa19.83■□□□□ 0.77
LRR1-203ENST00000540712 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
LRR1-203ENST00000540712 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
LRR1-203ENST00000540712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.82■□□□□ 0.76
LRR1-203ENST00000540712 RPS6KA4O75676 772 aa19.82■□□□□ 0.76
LRR1-203ENST00000540712 TJP1Q07157 1748 aa19.82■□□□□ 0.76
LRR1-203ENST00000540712 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
LRR1-203ENST00000540712 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms