RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
CACFD1-206ENST00000540581 ZNF445P59923 1031 aa19.42■□□□□ 0.7
CACFD1-206ENST00000540581 LRRCC1Q9C099 1032 aa19.42■□□□□ 0.7
CACFD1-206ENST00000540581 LRRFIP2Q9Y608 721 aaKnown RBP19.42■□□□□ 0.7
CACFD1-206ENST00000540581 MX1P20591 662 aa19.41■□□□□ 0.7
CACFD1-206ENST00000540581 ESYT1Q9BSJ8 1104 aa19.41■□□□□ 0.7
CACFD1-206ENST00000540581 ROBO2Q9HCK4 1378 aa19.41■□□□□ 0.7
CACFD1-206ENST00000540581 IL25Q9H293 177 aa19.4■□□□□ 0.7
CACFD1-206ENST00000540581 KIF24Q5T7B8 1368 aa19.4■□□□□ 0.7
CACFD1-206ENST00000540581 CCT4P50991 539 aaKnown RBP19.39■□□□□ 0.7
CACFD1-206ENST00000540581 FLIIQ13045 1269 aa19.39■□□□□ 0.7
CACFD1-206ENST00000540581 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
CACFD1-206ENST00000540581 NGDNQ8NEJ9 315 aaKnown RBP19.38■□□□□ 0.69
CACFD1-206ENST00000540581 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
CACFD1-206ENST00000540581 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
CACFD1-206ENST00000540581 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
CACFD1-206ENST00000540581 USHBP1Q8N6Y0 703 aa19.38■□□□□ 0.69
CACFD1-206ENST00000540581 EYA1Q99502 592 aa19.38■□□□□ 0.69
CACFD1-206ENST00000540581 EIF2S2P20042 333 aaKnown RBP19.38■□□□□ 0.69
CACFD1-206ENST00000540581 GADD45BO75293 160 aaPredicted RBP19.37■□□□□ 0.69
CACFD1-206ENST00000540581 MCCP23508 829 aa19.37■□□□□ 0.69
CACFD1-206ENST00000540581 CHMLP26374 656 aa19.37■□□□□ 0.69
CACFD1-206ENST00000540581 KIAA0232Q92628 1395 aa19.36■□□□□ 0.69
CACFD1-206ENST00000540581 CRB1P82279 1406 aa19.36■□□□□ 0.69
CACFD1-206ENST00000540581 PTMAP06454 111 aaKnown RBP19.36■□□□□ 0.69
CACFD1-206ENST00000540581 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
CACFD1-206ENST00000540581 DLC1Q96QB1 1528 aa19.35■□□□□ 0.69
CACFD1-206ENST00000540581 LRSAM1Q6UWE0 723 aa19.34■□□□□ 0.69
CACFD1-206ENST00000540581 DDX54Q8TDD1 881 aaKnown RBP19.34■□□□□ 0.69
CACFD1-206ENST00000540581 RRP9O43818 475 aaKnown RBP19.34■□□□□ 0.69
CACFD1-206ENST00000540581 SURF6O75683 361 aaKnown RBP19.34■□□□□ 0.69
CACFD1-206ENST00000540581 FAM13BQ9NYF5 915 aa19.34■□□□□ 0.69
CACFD1-206ENST00000540581 ANXA1P04083 346 aa19.34■□□□□ 0.69
CACFD1-206ENST00000540581 GLIPR1L2Q4G1C9 344 aa19.34■□□□□ 0.69
CACFD1-206ENST00000540581 IBTKQ9P2D0 1353 aaPredicted RBP19.33■□□□□ 0.69
CACFD1-206ENST00000540581 CPA1P15085 419 aa19.33■□□□□ 0.69
CACFD1-206ENST00000540581 CEBPAP49715 358 aaPredicted RBP19.33■□□□□ 0.69
CACFD1-206ENST00000540581 RIMS1Q86UR5 1692 aaKnown RBP19.33■□□□□ 0.68
CACFD1-206ENST00000540581 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.33■□□□□ 0.68
CACFD1-206ENST00000540581 OFD1O75665 1012 aa19.32■□□□□ 0.68
CACFD1-206ENST00000540581 NLRP6P59044 892 aa19.32■□□□□ 0.68
CACFD1-206ENST00000540581 UBTFL1P0CB47 393 aaPredicted RBP19.32■□□□□ 0.68
CACFD1-206ENST00000540581 ATP8B2P98198 1209 aa19.32■□□□□ 0.68
CACFD1-206ENST00000540581 PLCB2Q00722 1185 aa19.32■□□□□ 0.68
CACFD1-206ENST00000540581 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
CACFD1-206ENST00000540581 OSBPL3Q9H4L5 887 aa19.32■□□□□ 0.68
CACFD1-206ENST00000540581 BRD1O95696 1058 aa19.31■□□□□ 0.68
CACFD1-206ENST00000540581 GNAI3P08754 354 aa19.31■□□□□ 0.68
CACFD1-206ENST00000540581 LTKP29376 864 aa19.31■□□□□ 0.68
CACFD1-206ENST00000540581 ZNF830Q96NB3 372 aaPredicted RBP19.31■□□□□ 0.68
CACFD1-206ENST00000540581 TPM2P07951 284 aa19.3■□□□□ 0.68
CACFD1-206ENST00000540581 HDGFP51858 240 aaKnown RBP19.3■□□□□ 0.68
CACFD1-206ENST00000540581 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.3■□□□□ 0.68
CACFD1-206ENST00000540581 USP48Q86UV5 1035 aa19.3■□□□□ 0.68
CACFD1-206ENST00000540581 USP44Q9H0E7 712 aa19.3■□□□□ 0.68
CACFD1-206ENST00000540581 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
CACFD1-206ENST00000540581 PPP1R42Q7Z4L9 355 aa19.29■□□□□ 0.68
CACFD1-206ENST00000540581 NOL7Q9UMY1 257 aaKnown RBP19.29■□□□□ 0.68
CACFD1-206ENST00000540581 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
CACFD1-206ENST00000540581 CWC27Q6UX04 472 aaKnown RBP19.29■□□□□ 0.68
CACFD1-206ENST00000540581 REREQ9P2R6 1566 aa19.29■□□□□ 0.68
CACFD1-206ENST00000540581 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
CACFD1-206ENST00000540581 GNAT3A8MTJ3 354 aa19.28■□□□□ 0.68
CACFD1-206ENST00000540581 TSPY26PQ9H489 355 aa19.28■□□□□ 0.68
CACFD1-206ENST00000540581 CNPY2Q9Y2B0 182 aa19.28■□□□□ 0.68
CACFD1-206ENST00000540581 SRGAP3O43295 1099 aa19.27■□□□□ 0.68
CACFD1-206ENST00000540581 USP6P35125 1406 aa19.27■□□□□ 0.68
CACFD1-206ENST00000540581 SALL3Q9BXA9 1300 aa19.27■□□□□ 0.68
CACFD1-206ENST00000540581 OS9Q13438 667 aaPredicted RBP19.27■□□□□ 0.68
CACFD1-206ENST00000540581 RBM33Q96EV2 1170 aaKnown RBP19.27■□□□□ 0.68
CACFD1-206ENST00000540581 PDLIM2Q96JY6 352 aa19.27■□□□□ 0.68
CACFD1-206ENST00000540581 MBD3O95983 291 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 NRXN3Q9Y4C0 1643 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 OVOS2A0A0J9YW53 1432 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 OVOS2Q6IE36 1432 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 NBPF7P0C2Y1 421 aaPredicted RBP19.26■□□□□ 0.67
CACFD1-206ENST00000540581 UQCRHLA0A096LP55 91 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 FIBPO43427 364 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 UQCRHP07919 91 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
CACFD1-206ENST00000540581 PKNOX2Q96KN3 472 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 AMOTL2Q9Y2J4 779 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 ZKSCAN5Q9Y2L8 839 aa19.26■□□□□ 0.67
CACFD1-206ENST00000540581 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 PLEKHG3A1L390 1219 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 MCM2P49736 904 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 CUL4AQ13619 759 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
CACFD1-206ENST00000540581 RASEFQ8IZ41 740 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 C17orf53Q8N3J3 647 aaPredicted RBP19.25■□□□□ 0.67
CACFD1-206ENST00000540581 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 C3P01024 1663 aa19.25■□□□□ 0.67
CACFD1-206ENST00000540581 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
CACFD1-206ENST00000540581 JARID2Q92833 1246 aaPredicted RBP19.24■□□□□ 0.67
CACFD1-206ENST00000540581 USP25Q9UHP3 1055 aa19.24■□□□□ 0.67
CACFD1-206ENST00000540581 CHMP3Q9Y3E7 222 aa19.24■□□□□ 0.67
CACFD1-206ENST00000540581 ZMYND15Q9H091 742 aa19.24■□□□□ 0.67
CACFD1-206ENST00000540581 MON2Q7Z3U7 1717 aa19.24■□□□□ 0.67
CACFD1-206ENST00000540581 ITSN1Q15811 1721 aa19.23■□□□□ 0.67
CACFD1-206ENST00000540581 RHPN1Q8TCX5 695 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms