RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 TMOD3Q9NYL9 352 aa13.44□□□□□ -0.26
PPFIBP1-212ENST00000540503 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
PPFIBP1-212ENST00000540503 LGR6Q9HBX8 967 aa13.43□□□□□ -0.26
PPFIBP1-212ENST00000540503 BTAF1O14981 1849 aa13.42□□□□□ -0.26
PPFIBP1-212ENST00000540503 E9PSI1 815 aa13.42□□□□□ -0.26
PPFIBP1-212ENST00000540503 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
PPFIBP1-212ENST00000540503 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
PPFIBP1-212ENST00000540503 MYH16Q9H6N6 1097 aa13.42□□□□□ -0.26
PPFIBP1-212ENST00000540503 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
PPFIBP1-212ENST00000540503 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
PPFIBP1-212ENST00000540503 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
PPFIBP1-212ENST00000540503 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
PPFIBP1-212ENST00000540503 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
PPFIBP1-212ENST00000540503 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
PPFIBP1-212ENST00000540503 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
PPFIBP1-212ENST00000540503 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
PPFIBP1-212ENST00000540503 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
PPFIBP1-212ENST00000540503 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
PPFIBP1-212ENST00000540503 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
PPFIBP1-212ENST00000540503 CHL1O00533 1208 aa13.38□□□□□ -0.27
PPFIBP1-212ENST00000540503 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
PPFIBP1-212ENST00000540503 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
PPFIBP1-212ENST00000540503 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
PPFIBP1-212ENST00000540503 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
PPFIBP1-212ENST00000540503 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
PPFIBP1-212ENST00000540503 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
PPFIBP1-212ENST00000540503 SLFN5Q08AF3 891 aa13.37□□□□□ -0.27
PPFIBP1-212ENST00000540503 PIGBQ92521 554 aa13.37□□□□□ -0.27
PPFIBP1-212ENST00000540503 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
PPFIBP1-212ENST00000540503 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
PPFIBP1-212ENST00000540503 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
PPFIBP1-212ENST00000540503 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
PPFIBP1-212ENST00000540503 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
PPFIBP1-212ENST00000540503 LY75O60449 1722 aa13.36□□□□□ -0.27
PPFIBP1-212ENST00000540503 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 KCNQ2O43526 872 aa13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 TRIM37O94972 964 aa13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
PPFIBP1-212ENST00000540503 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
PPFIBP1-212ENST00000540503 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
PPFIBP1-212ENST00000540503 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
PPFIBP1-212ENST00000540503 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
PPFIBP1-212ENST00000540503 EP400Q96L91 3159 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 SLC39A6Q13433 755 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 C5P01031 1676 aa13.33□□□□□ -0.28
PPFIBP1-212ENST00000540503 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
PPFIBP1-212ENST00000540503 HOXB7P09629 217 aa13.32□□□□□ -0.28
PPFIBP1-212ENST00000540503 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
PPFIBP1-212ENST00000540503 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
PPFIBP1-212ENST00000540503 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
PPFIBP1-212ENST00000540503 TJP1Q07157 1748 aa13.32□□□□□ -0.28
PPFIBP1-212ENST00000540503 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
PPFIBP1-212ENST00000540503 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
PPFIBP1-212ENST00000540503 KCNQ3O43525 872 aa13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 SNRPA1P09661 255 aaKnown RBP13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
PPFIBP1-212ENST00000540503 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 LOC102724428A0A0B4J2F2 783 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 APBA3O96018 575 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 BAG6P46379 1132 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 SIK1P57059 783 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 ZNF428Q96B54 188 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
PPFIBP1-212ENST00000540503 PLSCR1O15162 318 aa13.28□□□□□ -0.28
PPFIBP1-212ENST00000540503 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
PPFIBP1-212ENST00000540503 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
PPFIBP1-212ENST00000540503 RREB1Q92766 1687 aa13.28□□□□□ -0.28
PPFIBP1-212ENST00000540503 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
PPFIBP1-212ENST00000540503 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
PPFIBP1-212ENST00000540503 CCNL1Q9UK58 526 aaPredicted RBP13.27□□□□□ -0.29
PPFIBP1-212ENST00000540503 STARD3NLO95772 234 aa13.26□□□□□ -0.29
PPFIBP1-212ENST00000540503 ERBB4Q15303 1308 aa13.26□□□□□ -0.29
PPFIBP1-212ENST00000540503 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
PPFIBP1-212ENST00000540503 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
PPFIBP1-212ENST00000540503 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
PPFIBP1-212ENST00000540503 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
PPFIBP1-212ENST00000540503 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
PPFIBP1-212ENST00000540503 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
PPFIBP1-212ENST00000540503 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
PPFIBP1-212ENST00000540503 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
PPFIBP1-212ENST00000540503 VAMP4O75379 141 aa13.24□□□□□ -0.29
PPFIBP1-212ENST00000540503 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
PPFIBP1-212ENST00000540503 NUP188Q5SRE5 1749 aa13.24□□□□□ -0.29
PPFIBP1-212ENST00000540503 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms