RNA–Protein interactions for RNA: ENST00000540501.1

STIP1-208, Transcript of stress induced phosphoprotein 1, human

TSL 3

Gene STIP1, Length 880 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STIP1-208	ENST00000540501	THUMPD2	Q9BTF0	503 aa	Known RBP	33.51	■■■□□ 2.95
STIP1-208	ENST00000540501	IFT57	Q9NWB7	429 aa		33.51	■■■□□ 2.95
STIP1-208	ENST00000540501	SBF2	Q86WG5	1849 aa		33.5	■■■□□ 2.95
STIP1-208	ENST00000540501	SIPA1L3	O60292	1781 aa	Predicted RBP	33.49	■■■□□ 2.95
STIP1-208	ENST00000540501	NFATC2IP	Q8NCF5	419 aa		33.49	■■■□□ 2.95
STIP1-208	ENST00000540501	CFAP44	Q96MT7	982 aa		33.49	■■■□□ 2.95
STIP1-208	ENST00000540501	PRIM1	P49642	420 aa	Known RBP	33.48	■■■□□ 2.95
STIP1-208	ENST00000540501	SYTL4	Q96C24	671 aa	Predicted RBP	33.47	■■■□□ 2.95
STIP1-208	ENST00000540501	NHS	Q6T4R5	1651 aa		33.47	■■■□□ 2.95
STIP1-208	ENST00000540501		E9PSI1	815 aa		33.46	■■■□□ 2.95
STIP1-208	ENST00000540501	FAM182B	Q5T319	152 aa		33.46	■■■□□ 2.95
STIP1-208	ENST00000540501	ACSBG1	Q96GR2	724 aa		33.46	■■■□□ 2.95
STIP1-208	ENST00000540501	BTBD11	A6QL63	1104 aa		33.45	■■■□□ 2.95
STIP1-208	ENST00000540501	MYH16	Q9H6N6	1097 aa		33.45	■■■□□ 2.95
STIP1-208	ENST00000540501	CHL1	O00533	1208 aa		33.44	■■■□□ 2.94
STIP1-208	ENST00000540501	ZNF853	P0CG23	659 aa		33.44	■■■□□ 2.94
STIP1-208	ENST00000540501	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.43	■■■□□ 2.94
STIP1-208	ENST00000540501	PIGB	Q92521	554 aa		33.42	■■■□□ 2.94
STIP1-208	ENST00000540501	TSPYL4	Q9UJ04	414 aa		33.42	■■■□□ 2.94
STIP1-208	ENST00000540501	LAS1L	Q9Y4W2	734 aa	Known RBP	33.42	■■■□□ 2.94
STIP1-208	ENST00000540501	SLFN5	Q08AF3	891 aa		33.39	■■■□□ 2.94
STIP1-208	ENST00000540501	TTC5	Q8N0Z6	440 aa		33.39	■■■□□ 2.94
STIP1-208	ENST00000540501	SMARCC1	Q92922	1105 aa	Predicted RBP	33.39	■■■□□ 2.94
STIP1-208	ENST00000540501	KCNQ2	O43526	872 aa		33.37	■■■□□ 2.93
STIP1-208	ENST00000540501	ZNF790	Q6PG37	636 aa		33.37	■■■□□ 2.93
STIP1-208	ENST00000540501	KDM3B	Q7LBC6	1761 aa		33.37	■■■□□ 2.93
STIP1-208	ENST00000540501	MBIP	Q9NS73	344 aa		33.35	■■■□□ 2.93
STIP1-208	ENST00000540501	TRIM37	O94972	964 aa		33.34	■■■□□ 2.93
STIP1-208	ENST00000540501	BTAF1	O14981	1849 aa		33.34	■■■□□ 2.93
STIP1-208	ENST00000540501	PAPPA	Q13219	1627 aa		33.33	■■■□□ 2.93
STIP1-208	ENST00000540501	TRMT2A	Q8IZ69	625 aa	Known RBP	33.33	■■■□□ 2.93
STIP1-208	ENST00000540501	ATG3	Q9NT62	314 aa		33.32	■■■□□ 2.92
STIP1-208	ENST00000540501	MIS18A	Q9NYP9	233 aa		33.32	■■■□□ 2.92
STIP1-208	ENST00000540501	CDCA7L	Q96GN5	454 aa		33.31	■■■□□ 2.92
STIP1-208	ENST00000540501	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.31	■■■□□ 2.92
STIP1-208	ENST00000540501	FANCI	Q9NVI1	1328 aa		33.3	■■■□□ 2.92
STIP1-208	ENST00000540501	SLC39A6	Q13433	755 aa		33.3	■■■□□ 2.92
STIP1-208	ENST00000540501	FMNL2	Q96PY5	1086 aa		33.3	■■■□□ 2.92
STIP1-208	ENST00000540501	HMGB2	P26583	209 aa	Known RBP	33.29	■■■□□ 2.92
STIP1-208	ENST00000540501	CCDC125	Q86Z20	511 aa		33.29	■■■□□ 2.92
STIP1-208	ENST00000540501	ASAP1	Q9ULH1	1129 aa		33.29	■■■□□ 2.92
STIP1-208	ENST00000540501	UBR2	Q8IWV8	1755 aa		33.28	■■■□□ 2.92
STIP1-208	ENST00000540501	SOS1	Q07889	1333 aa	Predicted RBP	33.28	■■■□□ 2.92
STIP1-208	ENST00000540501	EIF4A1	P60842	406 aa	Known RBP	33.27	■■■□□ 2.92
STIP1-208	ENST00000540501	DUSP27	Q5VZP5	1158 aa		33.27	■■■□□ 2.92
STIP1-208	ENST00000540501	TSR2	Q969E8	191 aa	Known RBP	33.27	■■■□□ 2.92
STIP1-208	ENST00000540501	CHMP4A	Q9BY43	222 aa		33.27	■■■□□ 2.92
STIP1-208	ENST00000540501	SF3B2	Q13435	895 aa	Known RBP	33.26	■■■□□ 2.91
STIP1-208	ENST00000540501	VSIG10	Q8N0Z9	540 aa		33.26	■■■□□ 2.91
STIP1-208	ENST00000540501	PALLD	Q8WX93	1383 aa		33.25	■■■□□ 2.91
STIP1-208	ENST00000540501	PLSCR1	O15162	318 aa		33.24	■■■□□ 2.91
STIP1-208	ENST00000540501	KCNQ3	O43525	872 aa		33.23	■■■□□ 2.91
STIP1-208	ENST00000540501	HOXB7	P09629	217 aa		33.23	■■■□□ 2.91
STIP1-208	ENST00000540501	PTF1A	Q7RTS3	328 aa		33.23	■■■□□ 2.91
STIP1-208	ENST00000540501	CT47B1	P0C2W7	299 aa	Predicted RBP	33.22	■■■□□ 2.91
STIP1-208	ENST00000540501	ZNF496	Q96IT1	587 aa	Predicted RBP	33.22	■■■□□ 2.91
STIP1-208	ENST00000540501	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.22	■■■□□ 2.91
STIP1-208	ENST00000540501	KCP	Q6ZWJ8	1503 aa		33.22	■■■□□ 2.91
STIP1-208	ENST00000540501	TNS1	Q9HBL0	1735 aa	Known RBP	33.22	■■■□□ 2.91
STIP1-208	ENST00000540501	HEG1	Q9ULI3	1381 aa		33.21	■■■□□ 2.91
STIP1-208	ENST00000540501	APBA3	O96018	575 aa		33.21	■■■□□ 2.91
STIP1-208	ENST00000540501	SNRPA1	P09661	255 aa	Known RBP	33.21	■■■□□ 2.91
STIP1-208	ENST00000540501	RBM42	Q9BTD8	480 aa	Known RBP	33.21	■■■□□ 2.91
STIP1-208	ENST00000540501	ZNF831	Q5JPB2	1677 aa		33.2	■■■□□ 2.91
STIP1-208	ENST00000540501	PTCD1	O75127	700 aa	Known RBP	33.2	■■■□□ 2.91
STIP1-208	ENST00000540501	LY75	O60449	1722 aa		33.19	■■■□□ 2.9
STIP1-208	ENST00000540501	EXOSC9	Q06265	439 aa	Known RBP	33.19	■■■□□ 2.9
STIP1-208	ENST00000540501	LOC102724428	A0A0B4J2F2	783 aa		33.18	■■■□□ 2.9
STIP1-208	ENST00000540501	SIK1	P57059	783 aa		33.18	■■■□□ 2.9
STIP1-208	ENST00000540501	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.18	■■■□□ 2.9
STIP1-208	ENST00000540501	RGPD4	Q7Z3J3	1758 aa		33.18	■■■□□ 2.9
STIP1-208	ENST00000540501	GIGYF1	O75420	1035 aa	Predicted RBP	33.17	■■■□□ 2.9
STIP1-208	ENST00000540501	BAG6	P46379	1132 aa		33.16	■■■□□ 2.9
STIP1-208	ENST00000540501	SLC27A3	Q5K4L6	730 aa		33.16	■■■□□ 2.9
STIP1-208	ENST00000540501	ZNF428	Q96B54	188 aa		33.16	■■■□□ 2.9
STIP1-208	ENST00000540501	TWISTNB	Q3B726	338 aa	Predicted RBP	33.15	■■■□□ 2.9
STIP1-208	ENST00000540501	SRCAP	Q6ZRS2	3230 aa		33.15	■■■□□ 2.9
STIP1-208	ENST00000540501	CIC	Q96RK0	1608 aa	Predicted RBP	33.14	■■■□□ 2.9
STIP1-208	ENST00000540501	ATP6V1A	P38606	617 aa		33.14	■■■□□ 2.9
STIP1-208	ENST00000540501	C8orf58	Q8NAV2	365 aa		33.14	■■■□□ 2.9
STIP1-208	ENST00000540501	EP400	Q96L91	3159 aa		33.13	■■■□□ 2.89
STIP1-208	ENST00000540501	STARD3NL	O95772	234 aa		33.11	■■■□□ 2.89
STIP1-208	ENST00000540501	CCNL1	Q9UK58	526 aa	Predicted RBP	33.11	■■■□□ 2.89
STIP1-208	ENST00000540501	LAMB4	A4D0S4	1761 aa		33.09	■■■□□ 2.89
STIP1-208	ENST00000540501	VAMP4	O75379	141 aa		33.09	■■■□□ 2.89
STIP1-208	ENST00000540501	KRT24	Q2M2I5	525 aa		33.09	■■■□□ 2.89
STIP1-208	ENST00000540501	ELL2	O00472	640 aa	Predicted RBP	33.08	■■■□□ 2.89
STIP1-208	ENST00000540501	TSPYL6	Q8N831	410 aa		33.08	■■■□□ 2.89
STIP1-208	ENST00000540501	CACNA1F	O60840	1977 aa		33.07	■■■□□ 2.88
STIP1-208	ENST00000540501	TXNRD1	Q16881	649 aa		33.07	■■■□□ 2.88
STIP1-208	ENST00000540501	CCDC30	Q5VVM6	783 aa		33.07	■■■□□ 2.88
STIP1-208	ENST00000540501	SLC4A9	Q96Q91	983 aa		33.07	■■■□□ 2.88
STIP1-208	ENST00000540501	DNAJC10	Q8IXB1	793 aa		33.06	■■■□□ 2.88
STIP1-208	ENST00000540501	ERBB4	Q15303	1308 aa		33.05	■■■□□ 2.88
STIP1-208	ENST00000540501	C5	P01031	1676 aa		33.05	■■■□□ 2.88
STIP1-208	ENST00000540501	HDGFL1	Q5TGJ6	251 aa		33.05	■■■□□ 2.88
STIP1-208	ENST00000540501	TJP1	Q07157	1748 aa		33.05	■■■□□ 2.88
STIP1-208	ENST00000540501	USP16	Q9Y5T5	823 aa		33.04	■■■□□ 2.88
STIP1-208	ENST00000540501	EIF2S2	P20042	333 aa	Known RBP	33.03	■■■□□ 2.88
STIP1-208	ENST00000540501	CAMKK2	Q96RR4	588 aa		33.03	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms