RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
TRAPPC1-202ENST00000540486 IP6K1Q92551 441 aa12.56□□□□□ -0.4
TRAPPC1-202ENST00000540486 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-202ENST00000540486 C5P01031 1676 aa12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 FOXN1O15353 648 aa12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 DPEP1P16444 411 aa12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 CTCFP49711 727 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 CGNL1Q0VF96 1302 aa12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
TRAPPC1-202ENST00000540486 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
TRAPPC1-202ENST00000540486 RGS19P49795 217 aa12.54□□□□□ -0.4
TRAPPC1-202ENST00000540486 MIER1Q8N108 512 aa12.54□□□□□ -0.4
TRAPPC1-202ENST00000540486 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
TRAPPC1-202ENST00000540486 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
TRAPPC1-202ENST00000540486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC1-202ENST00000540486 ABHD8Q96I13 439 aa12.53□□□□□ -0.4
TRAPPC1-202ENST00000540486 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
TRAPPC1-202ENST00000540486 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
TRAPPC1-202ENST00000540486 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
TRAPPC1-202ENST00000540486 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
TRAPPC1-202ENST00000540486 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-202ENST00000540486 KCNA3P22001 575 aa12.52□□□□□ -0.41
TRAPPC1-202ENST00000540486 MPRIPQ6WCQ1 1025 aa12.52□□□□□ -0.41
TRAPPC1-202ENST00000540486 AIDAQ96BJ3 306 aa12.52□□□□□ -0.41
TRAPPC1-202ENST00000540486 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-202ENST00000540486 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
TRAPPC1-202ENST00000540486 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-202ENST00000540486 NME9Q86XW9 330 aa12.51□□□□□ -0.41
TRAPPC1-202ENST00000540486 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
TRAPPC1-202ENST00000540486 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-202ENST00000540486 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
TRAPPC1-202ENST00000540486 TMF1P82094 1093 aa12.5□□□□□ -0.41
TRAPPC1-202ENST00000540486 KIF13BQ9NQT8 1826 aa12.5□□□□□ -0.41
TRAPPC1-202ENST00000540486 TAF1LQ8IZX4 1826 aa12.49□□□□□ -0.41
TRAPPC1-202ENST00000540486 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
TRAPPC1-202ENST00000540486 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
TRAPPC1-202ENST00000540486 GNPATO15228 680 aa12.49□□□□□ -0.41
TRAPPC1-202ENST00000540486 MKRN1Q9UHC7 482 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-202ENST00000540486 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 SIK1P57059 783 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
TRAPPC1-202ENST00000540486 MEGF6O75095 1541 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 PCDH11XQ9BZA7 1347 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 PCDH11YQ9BZA8 1340 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 LBX1P52954 281 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 LTN1O94822 1766 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 N4BP2Q86UW6 1770 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 TOGARAM1Q9Y4F4 1720 aa12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 FAM208AQ9UK61 1670 aaKnown RBP12.47□□□□□ -0.41
TRAPPC1-202ENST00000540486 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
TRAPPC1-202ENST00000540486 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
TRAPPC1-202ENST00000540486 PKD1L3Q7Z443 1732 aa12.46□□□□□ -0.41
TRAPPC1-202ENST00000540486 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
TRAPPC1-202ENST00000540486 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC1-202ENST00000540486 HOXC9P31274 260 aa12.45□□□□□ -0.42
TRAPPC1-202ENST00000540486 PIGBQ92521 554 aa12.45□□□□□ -0.42
TRAPPC1-202ENST00000540486 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-202ENST00000540486 ARFGEF1Q9Y6D6 1849 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 CCDC85CA6NKD9 419 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 LMNB1P20700 586 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 AMPHP49418 695 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
TRAPPC1-202ENST00000540486 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
TRAPPC1-202ENST00000540486 POTECB2RU33 542 aa12.43□□□□□ -0.42
TRAPPC1-202ENST00000540486 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
TRAPPC1-202ENST00000540486 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
TRAPPC1-202ENST00000540486 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-202ENST00000540486 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-202ENST00000540486 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-202ENST00000540486 GYS1P13807 737 aa12.42□□□□□ -0.42
TRAPPC1-202ENST00000540486 VEGFBP49765 207 aa12.42□□□□□ -0.42
TRAPPC1-202ENST00000540486 ITPK1Q13572 414 aa12.42□□□□□ -0.42
TRAPPC1-202ENST00000540486 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-202ENST00000540486 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-202ENST00000540486 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
TRAPPC1-202ENST00000540486 CYP27B1O15528 508 aa12.41□□□□□ -0.42
TRAPPC1-202ENST00000540486 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-202ENST00000540486 RFC4P35249 363 aa12.41□□□□□ -0.42
TRAPPC1-202ENST00000540486 EDC4Q6P2E9 1401 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-202ENST00000540486 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.42
TRAPPC1-202ENST00000540486 MAP2K1Q02750 393 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-202ENST00000540486 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-202ENST00000540486 RC3H1Q5TC82 1133 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-202ENST00000540486 POTEHQ6S545 545 aa12.4□□□□□ -0.42
TRAPPC1-202ENST00000540486 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms