RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 SCN11AQ9UI33 1791 aa19.66■□□□□ 0.74
MDM1-210ENST00000540418 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
MDM1-210ENST00000540418 ASAP1Q9ULH1 1129 aa19.66■□□□□ 0.74
MDM1-210ENST00000540418 ITGB4P16144 1822 aa19.66■□□□□ 0.74
MDM1-210ENST00000540418 PROM2Q8N271 834 aa19.65■□□□□ 0.74
MDM1-210ENST00000540418 ATG3Q9NT62 314 aa19.65■□□□□ 0.74
MDM1-210ENST00000540418 LMOD3Q0VAK6 560 aa19.65■□□□□ 0.74
MDM1-210ENST00000540418 TXNRD1Q16881 649 aa19.65■□□□□ 0.74
MDM1-210ENST00000540418 MRC1P22897 1456 aa19.64■□□□□ 0.73
MDM1-210ENST00000540418 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
MDM1-210ENST00000540418 SLC27A3Q5K4L6 730 aa19.62■□□□□ 0.73
MDM1-210ENST00000540418 TRIM35Q9UPQ4 493 aa19.62■□□□□ 0.73
MDM1-210ENST00000540418 RGPD3A6NKT7 1758 aaPredicted RBP19.61■□□□□ 0.73
MDM1-210ENST00000540418 RGPD4Q7Z3J3 1758 aa19.61■□□□□ 0.73
MDM1-210ENST00000540418 TAF7Q15545 349 aaPredicted RBP19.6■□□□□ 0.73
MDM1-210ENST00000540418 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
MDM1-210ENST00000540418 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
MDM1-210ENST00000540418 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
MDM1-210ENST00000540418 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
MDM1-210ENST00000540418 SLC39A6Q13433 755 aa19.59■□□□□ 0.73
MDM1-210ENST00000540418 LRRC4BQ9NT99 713 aa19.59■□□□□ 0.73
MDM1-210ENST00000540418 LOC102724428A0A0B4J2F2 783 aa19.58■□□□□ 0.73
MDM1-210ENST00000540418 SIK1P57059 783 aa19.58■□□□□ 0.73
MDM1-210ENST00000540418 NCBP3Q53F19 620 aaKnown RBP19.58■□□□□ 0.73
MDM1-210ENST00000540418 VIRMAQ69YN4 1812 aaKnown RBP19.57■□□□□ 0.72
MDM1-210ENST00000540418 RBM42Q9BTD8 480 aaKnown RBP19.57■□□□□ 0.72
MDM1-210ENST00000540418 PTCD1O75127 700 aaKnown RBP19.57■□□□□ 0.72
MDM1-210ENST00000540418 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
MDM1-210ENST00000540418 KCNQ4P56696 695 aa19.57■□□□□ 0.72
MDM1-210ENST00000540418 ZNF790Q6PG37 636 aa19.57■□□□□ 0.72
MDM1-210ENST00000540418 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
MDM1-210ENST00000540418 CCDC27Q2M243 656 aa19.56■□□□□ 0.72
MDM1-210ENST00000540418 LY75O60449 1722 aa19.56■□□□□ 0.72
MDM1-210ENST00000540418 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
MDM1-210ENST00000540418 ATP6V1AP38606 617 aa19.55■□□□□ 0.72
MDM1-210ENST00000540418 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
MDM1-210ENST00000540418 RREB1Q92766 1687 aa19.55■□□□□ 0.72
MDM1-210ENST00000540418 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
MDM1-210ENST00000540418 SLC4A9Q96Q91 983 aa19.54■□□□□ 0.72
MDM1-210ENST00000540418 MIS18AQ9NYP9 233 aa19.54■□□□□ 0.72
MDM1-210ENST00000540418 NGEFQ8N5V2 710 aa19.54■□□□□ 0.72
MDM1-210ENST00000540418 BABAM1Q9NWV8 329 aa19.54■□□□□ 0.72
MDM1-210ENST00000540418 KCNQ3O43525 872 aa19.53■□□□□ 0.72
MDM1-210ENST00000540418 CALD1Q05682 793 aaKnown RBP19.53■□□□□ 0.72
MDM1-210ENST00000540418 ITPK1Q13572 414 aa19.52■□□□□ 0.72
MDM1-210ENST00000540418 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
MDM1-210ENST00000540418 PAPPAQ13219 1627 aa19.52■□□□□ 0.72
MDM1-210ENST00000540418 ZNF496Q96IT1 587 aaPredicted RBP19.52■□□□□ 0.71
MDM1-210ENST00000540418 NUP188Q5SRE5 1749 aa19.51■□□□□ 0.71
MDM1-210ENST00000540418 VSIG10Q8N0Z9 540 aa19.51■□□□□ 0.71
MDM1-210ENST00000540418 FMNL2Q96PY5 1086 aa19.51■□□□□ 0.71
MDM1-210ENST00000540418 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
MDM1-210ENST00000540418 KCPQ6ZWJ8 1503 aa19.5■□□□□ 0.71
MDM1-210ENST00000540418 STK32BQ9NY57 414 aa19.5■□□□□ 0.71
MDM1-210ENST00000540418 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
MDM1-210ENST00000540418 CHL1O00533 1208 aa19.5■□□□□ 0.71
MDM1-210ENST00000540418 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
MDM1-210ENST00000540418 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
MDM1-210ENST00000540418 LINC00116Q8NCU8 138 aa19.49■□□□□ 0.71
MDM1-210ENST00000540418 AKT1S1Q96B36 256 aa19.49■□□□□ 0.71
MDM1-210ENST00000540418 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
MDM1-210ENST00000540418 SLC15A2Q16348 729 aa19.49■□□□□ 0.71
MDM1-210ENST00000540418 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
MDM1-210ENST00000540418 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
MDM1-210ENST00000540418 IFT57Q9NWB7 429 aa19.48■□□□□ 0.71
MDM1-210ENST00000540418 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
MDM1-210ENST00000540418 ZNF827Q17R98 1081 aa19.47■□□□□ 0.71
MDM1-210ENST00000540418 DNAJC10Q8IXB1 793 aa19.47■□□□□ 0.71
MDM1-210ENST00000540418 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
MDM1-210ENST00000540418 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
MDM1-210ENST00000540418 GNAI1P63096 354 aa19.47■□□□□ 0.71
MDM1-210ENST00000540418 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
MDM1-210ENST00000540418 UBR2Q8IWV8 1755 aa19.46■□□□□ 0.71
MDM1-210ENST00000540418 R3HDM1Q15032 1099 aaKnown RBP19.46■□□□□ 0.71
MDM1-210ENST00000540418 SNRPA1P09661 255 aaKnown RBP19.46■□□□□ 0.71
MDM1-210ENST00000540418 RC3H1Q5TC82 1133 aaKnown RBP19.46■□□□□ 0.71
MDM1-210ENST00000540418 TFCP2L1Q9NZI6 479 aa19.45■□□□□ 0.7
MDM1-210ENST00000540418 IL16Q14005 1332 aa19.45■□□□□ 0.7
MDM1-210ENST00000540418 AK7Q96M32 723 aa19.45■□□□□ 0.7
MDM1-210ENST00000540418 C5P01031 1676 aa19.44■□□□□ 0.7
MDM1-210ENST00000540418 STARD3NLO95772 234 aa19.44■□□□□ 0.7
MDM1-210ENST00000540418 CYP19A1P11511 503 aaPredicted RBP19.44■□□□□ 0.7
MDM1-210ENST00000540418 MBIPQ9NS73 344 aa19.44■□□□□ 0.7
MDM1-210ENST00000540418 CNTNAP4Q9C0A0 1308 aa19.43■□□□□ 0.7
MDM1-210ENST00000540418 PSDA5PKW4 1024 aaPredicted RBP19.43■□□□□ 0.7
MDM1-210ENST00000540418 KDM3BQ7LBC6 1761 aa19.43■□□□□ 0.7
MDM1-210ENST00000540418 CRKLP46109 303 aaKnown RBP19.43■□□□□ 0.7
MDM1-210ENST00000540418 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
MDM1-210ENST00000540418 TAF1LQ8IZX4 1826 aa19.42■□□□□ 0.7
MDM1-210ENST00000540418 C4BP0C0L5 1744 aa19.42■□□□□ 0.7
MDM1-210ENST00000540418 CICQ96RK0 1608 aaPredicted RBP19.42■□□□□ 0.7
MDM1-210ENST00000540418 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
MDM1-210ENST00000540418 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
MDM1-210ENST00000540418 TJP1Q07157 1748 aa19.41■□□□□ 0.7
MDM1-210ENST00000540418 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
MDM1-210ENST00000540418 USP16Q9Y5T5 823 aa19.41■□□□□ 0.7
MDM1-210ENST00000540418 GNPATO15228 680 aa19.41■□□□□ 0.7
MDM1-210ENST00000540418 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
MDM1-210ENST00000540418 FLAD1Q8NFF5 587 aa19.4■□□□□ 0.7
MDM1-210ENST00000540418 RPS6KA4O75676 772 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 363.2 ms