RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ZBED9Q6R2W3 1325 aa20.11■□□□□ 0.81
DDB1-216ENST00000539739 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
DDB1-216ENST00000539739 DOT1LQ8TEK3 1739 aa20.11■□□□□ 0.81
DDB1-216ENST00000539739 IL16Q14005 1332 aa20.11■□□□□ 0.81
DDB1-216ENST00000539739 ZNF521Q96K83 1311 aa20.11■□□□□ 0.81
DDB1-216ENST00000539739 MRC1P22897 1456 aa20.1■□□□□ 0.81
DDB1-216ENST00000539739 BTBD11A6QL63 1104 aa20.1■□□□□ 0.81
DDB1-216ENST00000539739 TRIM37O94972 964 aa20.1■□□□□ 0.81
DDB1-216ENST00000539739 GNAI1P63096 354 aa20.1■□□□□ 0.81
DDB1-216ENST00000539739 BABAM1Q9NWV8 329 aa20.1■□□□□ 0.81
DDB1-216ENST00000539739 TOGARAM1Q9Y4F4 1720 aa20.1■□□□□ 0.81
DDB1-216ENST00000539739 VIRMAQ69YN4 1812 aaKnown RBP20.1■□□□□ 0.81
DDB1-216ENST00000539739 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
DDB1-216ENST00000539739 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
DDB1-216ENST00000539739 IFT57Q9NWB7 429 aa20.09■□□□□ 0.81
DDB1-216ENST00000539739 TSPYL4Q9UJ04 414 aa20.08■□□□□ 0.8
DDB1-216ENST00000539739 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
DDB1-216ENST00000539739 ITGB4P16144 1822 aa20.07■□□□□ 0.8
DDB1-216ENST00000539739 NHSQ6T4R5 1651 aa20.07■□□□□ 0.8
DDB1-216ENST00000539739 CHL1O00533 1208 aa20.06■□□□□ 0.8
DDB1-216ENST00000539739 SMARCC1Q92922 1105 aaPredicted RBP20.06■□□□□ 0.8
DDB1-216ENST00000539739 MIS18AQ9NYP9 233 aa20.06■□□□□ 0.8
DDB1-216ENST00000539739 SBF2Q86WG5 1849 aa20.06■□□□□ 0.8
DDB1-216ENST00000539739 ZNF853P0CG23 659 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 MYH16Q9H6N6 1097 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 E9PSI1 815 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 SF3B2Q13435 895 aaKnown RBP20.05■□□□□ 0.8
DDB1-216ENST00000539739 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 ASAP1Q9ULH1 1129 aa20.05■□□□□ 0.8
DDB1-216ENST00000539739 ATG3Q9NT62 314 aa20.04■□□□□ 0.8
DDB1-216ENST00000539739 SIPA1L3O60292 1781 aaPredicted RBP20.04■□□□□ 0.8
DDB1-216ENST00000539739 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
DDB1-216ENST00000539739 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
DDB1-216ENST00000539739 EP400Q96L91 3159 aa20.03■□□□□ 0.8
DDB1-216ENST00000539739 CCDC125Q86Z20 511 aa20.02■□□□□ 0.8
DDB1-216ENST00000539739 APBA3O96018 575 aa20.02■□□□□ 0.79
DDB1-216ENST00000539739 SLFN5Q08AF3 891 aa20.02■□□□□ 0.79
DDB1-216ENST00000539739 ILDR2Q71H61 639 aa20.02■□□□□ 0.79
DDB1-216ENST00000539739 SPINK5Q9NQ38 1064 aaPredicted RBP20.02■□□□□ 0.79
DDB1-216ENST00000539739 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
DDB1-216ENST00000539739 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
DDB1-216ENST00000539739 FMNL2Q96PY5 1086 aa20.01■□□□□ 0.79
DDB1-216ENST00000539739 KCNQ3O43525 872 aa20■□□□□ 0.79
DDB1-216ENST00000539739 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
DDB1-216ENST00000539739 TSR2Q969E8 191 aaKnown RBP20■□□□□ 0.79
DDB1-216ENST00000539739 BTAF1O14981 1849 aa20■□□□□ 0.79
DDB1-216ENST00000539739 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
DDB1-216ENST00000539739 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
DDB1-216ENST00000539739 PLSCR1O15162 318 aa19.98■□□□□ 0.79
DDB1-216ENST00000539739 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
DDB1-216ENST00000539739 ZNF496Q96IT1 587 aaPredicted RBP19.98■□□□□ 0.79
DDB1-216ENST00000539739 BAG6P46379 1132 aa19.97■□□□□ 0.79
DDB1-216ENST00000539739 KDM3BQ7LBC6 1761 aa19.96■□□□□ 0.79
DDB1-216ENST00000539739 LOC102724428A0A0B4J2F2 783 aa19.96■□□□□ 0.79
DDB1-216ENST00000539739 SIK1P57059 783 aa19.96■□□□□ 0.79
DDB1-216ENST00000539739 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
DDB1-216ENST00000539739 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
DDB1-216ENST00000539739 PAPPAQ13219 1627 aa19.96■□□□□ 0.79
DDB1-216ENST00000539739 DUSP27Q5VZP5 1158 aa19.95■□□□□ 0.78
DDB1-216ENST00000539739 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
DDB1-216ENST00000539739 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
DDB1-216ENST00000539739 HMGB2P26583 209 aaKnown RBP19.94■□□□□ 0.78
DDB1-216ENST00000539739 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
DDB1-216ENST00000539739 UPF1Q92900 1129 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDB1-216ENST00000539739 TEX13AQ9BXU3 409 aaPredicted RBP19.94■□□□□ 0.78
DDB1-216ENST00000539739 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
DDB1-216ENST00000539739 KCPQ6ZWJ8 1503 aa19.94■□□□□ 0.78
DDB1-216ENST00000539739 TNS1Q9HBL0 1735 aaKnown RBP19.93■□□□□ 0.78
DDB1-216ENST00000539739 GIGYF1O75420 1035 aaPredicted RBP19.93■□□□□ 0.78
DDB1-216ENST00000539739 EXOSC9Q06265 439 aaKnown RBP19.93■□□□□ 0.78
DDB1-216ENST00000539739 SLC27A3Q5K4L6 730 aa19.93■□□□□ 0.78
DDB1-216ENST00000539739 UBR2Q8IWV8 1755 aa19.92■□□□□ 0.78
DDB1-216ENST00000539739 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
DDB1-216ENST00000539739 HOXB7P09629 217 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 EN1Q05925 392 aaPredicted RBP19.91■□□□□ 0.78
DDB1-216ENST00000539739 TXNRD1Q16881 649 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 KRT24Q2M2I5 525 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 C8orf58Q8NAV2 365 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 CHMP4AQ9BY43 222 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 ELL2O00472 640 aaPredicted RBP19.91■□□□□ 0.78
DDB1-216ENST00000539739 SLC4A9Q96Q91 983 aa19.91■□□□□ 0.78
DDB1-216ENST00000539739 TWISTNBQ3B726 338 aaPredicted RBP19.9■□□□□ 0.78
DDB1-216ENST00000539739 CAMKK2Q96RR4 588 aa19.9■□□□□ 0.78
DDB1-216ENST00000539739 STARD3NLO95772 234 aa19.89■□□□□ 0.77
DDB1-216ENST00000539739 DEFB132Q7Z7B7 95 aa19.89■□□□□ 0.77
DDB1-216ENST00000539739 DNAJC10Q8IXB1 793 aa19.89■□□□□ 0.77
DDB1-216ENST00000539739 EZH2Q15910 746 aaKnown RBP19.88■□□□□ 0.77
DDB1-216ENST00000539739 TSPYL6Q8N831 410 aa19.88■□□□□ 0.77
DDB1-216ENST00000539739 LY75O60449 1722 aa19.88■□□□□ 0.77
DDB1-216ENST00000539739 PRAMEF22A3QJZ6 481 aa19.87■□□□□ 0.77
DDB1-216ENST00000539739 CT47B1P0C2W7 299 aaPredicted RBP19.87■□□□□ 0.77
DDB1-216ENST00000539739 PROM2Q8N271 834 aa19.87■□□□□ 0.77
DDB1-216ENST00000539739 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
DDB1-216ENST00000539739 EIF2S2P20042 333 aaKnown RBP19.87■□□□□ 0.77
DDB1-216ENST00000539739 KCNQ4P56696 695 aa19.87■□□□□ 0.77
DDB1-216ENST00000539739 ITPK1Q13572 414 aa19.87■□□□□ 0.77
DDB1-216ENST00000539739 LRRC4BQ9NT99 713 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms