RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IL17RAQ96F46 866 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 USP6P35125 1406 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 F6X3S4 739 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 MBD3O95983 291 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 SLC4A10Q6U841 1118 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 NOL7Q9UMY1 257 aaKnown RBP11.79□□□□□ -0.52
CDH13-204ENST00000539548 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.79□□□□□ -0.52
CDH13-204ENST00000539548 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 ROBO2Q9HCK4 1378 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 BRD1O95696 1058 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 MCCP23508 829 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
CDH13-204ENST00000539548 KIAA1211Q6ZU35 1233 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 RTF1Q92541 710 aaKnown RBP11.79□□□□□ -0.52
CDH13-204ENST00000539548 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
CDH13-204ENST00000539548 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
CDH13-204ENST00000539548 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
CDH13-204ENST00000539548 ZNF500O60304 480 aaPredicted RBP11.78□□□□□ -0.52
CDH13-204ENST00000539548 GNAI3P08754 354 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
CDH13-204ENST00000539548 TMEM63CQ9P1W3 806 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 SSH2Q76I76 1423 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 FOXO3O43524 673 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
CDH13-204ENST00000539548 MX1P20591 662 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 CHMLP26374 656 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 EXOC6BQ9Y2D4 811 aa11.78□□□□□ -0.52
CDH13-204ENST00000539548 KDRP35968 1356 aa11.77□□□□□ -0.52
CDH13-204ENST00000539548 XRN1Q8IZH2 1706 aaKnown RBP11.77□□□□□ -0.52
CDH13-204ENST00000539548 EPB41L2O43491 1005 aaKnown RBP11.77□□□□□ -0.53
CDH13-204ENST00000539548 MLECQ14165 292 aa11.77□□□□□ -0.53
CDH13-204ENST00000539548 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
CDH13-204ENST00000539548 MCM5P33992 734 aa11.77□□□□□ -0.53
CDH13-204ENST00000539548 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
CDH13-204ENST00000539548 N4BP2Q86UW6 1770 aaPredicted RBP11.76□□□□□ -0.53
CDH13-204ENST00000539548 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
CDH13-204ENST00000539548 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
CDH13-204ENST00000539548 AOX1Q06278 1338 aa11.76□□□□□ -0.53
CDH13-204ENST00000539548 SOS1Q07889 1333 aaPredicted RBP11.76□□□□□ -0.53
CDH13-204ENST00000539548 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
CDH13-204ENST00000539548 ADAMTS13Q76LX8 1427 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 SYCE3A1L190 88 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 CCDC30Q5VVM6 783 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 PALD1Q9ULE6 856 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
CDH13-204ENST00000539548 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 TMEM2Q9UHN6 1383 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 FLIIQ13045 1269 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 FLT4P35916 1363 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 UBR1Q8IWV7 1749 aa11.75□□□□□ -0.53
CDH13-204ENST00000539548 IGSF1Q8N6C5 1336 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 TSHZ3Q63HK5 1081 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 ANO2Q9NQ90 1003 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
CDH13-204ENST00000539548 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
CDH13-204ENST00000539548 RILPL2Q969X0 211 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
CDH13-204ENST00000539548 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 TNRQ92752 1358 aa11.74□□□□□ -0.53
CDH13-204ENST00000539548 FKBP5Q13451 457 aaPredicted RBP11.73□□□□□ -0.53
CDH13-204ENST00000539548 SYAP1Q96A49 352 aaPredicted RBP11.73□□□□□ -0.53
CDH13-204ENST00000539548 EYA1Q99502 592 aa11.73□□□□□ -0.53
CDH13-204ENST00000539548 PDCL3Q9H2J4 239 aa11.73□□□□□ -0.53
CDH13-204ENST00000539548 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
CDH13-204ENST00000539548 PXDNLA1KZ92 1463 aa11.73□□□□□ -0.53
CDH13-204ENST00000539548 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
CDH13-204ENST00000539548 CEP170BQ9Y4F5 1589 aaPredicted RBP11.72□□□□□ -0.53
CDH13-204ENST00000539548 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
CDH13-204ENST00000539548 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
CDH13-204ENST00000539548 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
CDH13-204ENST00000539548 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
CDH13-204ENST00000539548 LRRFIP2Q9Y608 721 aaKnown RBP11.72□□□□□ -0.53
CDH13-204ENST00000539548 PTPRUQ92729 1446 aa11.72□□□□□ -0.53
CDH13-204ENST00000539548 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 SOX12O15370 315 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 RAB11FIP3O75154 756 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 HSPA4P34932 840 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.53
CDH13-204ENST00000539548 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
CDH13-204ENST00000539548 AMPHP49418 695 aa11.71□□□□□ -0.54
CDH13-204ENST00000539548 PHF14O94880 888 aa11.7□□□□□ -0.54
CDH13-204ENST00000539548 UBTFL1P0CB47 393 aaPredicted RBP11.69□□□□□ -0.54
CDH13-204ENST00000539548 XPCQ01831 940 aaPredicted RBP11.69□□□□□ -0.54
CDH13-204ENST00000539548 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
CDH13-204ENST00000539548 TMEM87AQ8NBN3 555 aa11.69□□□□□ -0.54
CDH13-204ENST00000539548 R3HCC1Q9Y3T6 440 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms