RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
SLC3A2-213ENST00000539458 IL17REQ8NFR9 667 aa22.94■■□□□ 1.26
SLC3A2-213ENST00000539458 RTF1Q92541 710 aaKnown RBP22.94■■□□□ 1.26
SLC3A2-213ENST00000539458 PALLDQ8WX93 1383 aa22.93■■□□□ 1.26
SLC3A2-213ENST00000539458 DCAF8L1A6NGE4 600 aa22.93■■□□□ 1.26
SLC3A2-213ENST00000539458 TXNRD1Q16881 649 aa22.93■■□□□ 1.26
SLC3A2-213ENST00000539458 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
SLC3A2-213ENST00000539458 SMARCC1Q92922 1105 aaPredicted RBP22.93■■□□□ 1.26
SLC3A2-213ENST00000539458 PPP1R1BQ9UD71 204 aaPredicted RBP22.93■■□□□ 1.26
SLC3A2-213ENST00000539458 SIPA1L3O60292 1781 aaPredicted RBP22.92■■□□□ 1.26
SLC3A2-213ENST00000539458 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
SLC3A2-213ENST00000539458 PROM2Q8N271 834 aa22.92■■□□□ 1.26
SLC3A2-213ENST00000539458 PAPPAQ13219 1627 aa22.92■■□□□ 1.26
SLC3A2-213ENST00000539458 TMPOP42166 694 aaKnown RBP22.9■■□□□ 1.26
SLC3A2-213ENST00000539458 TEFQ10587 303 aa22.9■■□□□ 1.26
SLC3A2-213ENST00000539458 MCM10Q7L590 875 aa22.9■■□□□ 1.26
SLC3A2-213ENST00000539458 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
SLC3A2-213ENST00000539458 ASAP1Q9ULH1 1129 aa22.9■■□□□ 1.26
SLC3A2-213ENST00000539458 SLC27A3Q5K4L6 730 aa22.89■■□□□ 1.25
SLC3A2-213ENST00000539458 SPON1Q9HCB6 807 aa22.89■■□□□ 1.25
SLC3A2-213ENST00000539458 RIPK4P57078 832 aa22.88■■□□□ 1.25
SLC3A2-213ENST00000539458 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
SLC3A2-213ENST00000539458 DCTN1Q14203 1278 aa22.87■■□□□ 1.25
SLC3A2-213ENST00000539458 MIER1Q8N108 512 aa22.86■■□□□ 1.25
SLC3A2-213ENST00000539458 CCNL1Q9UK58 526 aaPredicted RBP22.86■■□□□ 1.25
SLC3A2-213ENST00000539458 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
SLC3A2-213ENST00000539458 ZNF831Q5JPB2 1677 aa22.86■■□□□ 1.25
SLC3A2-213ENST00000539458 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
SLC3A2-213ENST00000539458 LRRC4BQ9NT99 713 aa22.85■■□□□ 1.25
SLC3A2-213ENST00000539458 APAF1O14727 1248 aa22.84■■□□□ 1.25
SLC3A2-213ENST00000539458 NEUROD2Q15784 382 aa22.84■■□□□ 1.25
SLC3A2-213ENST00000539458 C5P01031 1676 aa22.84■■□□□ 1.25
SLC3A2-213ENST00000539458 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
SLC3A2-213ENST00000539458 LOC102724428A0A0B4J2F2 783 aa22.83■■□□□ 1.25
SLC3A2-213ENST00000539458 SIK1P57059 783 aa22.83■■□□□ 1.25
SLC3A2-213ENST00000539458 KCPQ6ZWJ8 1503 aa22.82■■□□□ 1.24
SLC3A2-213ENST00000539458 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
SLC3A2-213ENST00000539458 YY1P25490 414 aa22.81■■□□□ 1.24
SLC3A2-213ENST00000539458 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
SLC3A2-213ENST00000539458 KCNQ4P56696 695 aa22.81■■□□□ 1.24
SLC3A2-213ENST00000539458 SLC39A6Q13433 755 aa22.81■■□□□ 1.24
SLC3A2-213ENST00000539458 THUMPD2Q9BTF0 503 aaKnown RBP22.81■■□□□ 1.24
SLC3A2-213ENST00000539458 TRIM35Q9UPQ4 493 aa22.81■■□□□ 1.24
SLC3A2-213ENST00000539458 TAF1LQ8IZX4 1826 aa22.8■■□□□ 1.24
SLC3A2-213ENST00000539458 BTBD11A6QL63 1104 aa22.8■■□□□ 1.24
SLC3A2-213ENST00000539458 RBM42Q9BTD8 480 aaKnown RBP22.8■■□□□ 1.24
SLC3A2-213ENST00000539458 PTCD1O75127 700 aaKnown RBP22.79■■□□□ 1.24
SLC3A2-213ENST00000539458 ATP6V1AP38606 617 aa22.79■■□□□ 1.24
SLC3A2-213ENST00000539458 TAF7Q15545 349 aaPredicted RBP22.79■■□□□ 1.24
SLC3A2-213ENST00000539458 ZNF790Q6PG37 636 aa22.79■■□□□ 1.24
SLC3A2-213ENST00000539458 TTC5Q8N0Z6 440 aa22.79■■□□□ 1.24
SLC3A2-213ENST00000539458 ANO8Q9HCE9 1232 aaPredicted RBP22.79■■□□□ 1.24
SLC3A2-213ENST00000539458 SLC4A9Q96Q91 983 aa22.78■■□□□ 1.24
SLC3A2-213ENST00000539458 C4BP0C0L5 1744 aa22.77■■□□□ 1.24
SLC3A2-213ENST00000539458 TJP1Q07157 1748 aa22.77■■□□□ 1.24
SLC3A2-213ENST00000539458 KDM3BQ7LBC6 1761 aa22.77■■□□□ 1.24
SLC3A2-213ENST00000539458 STK32BQ9NY57 414 aa22.77■■□□□ 1.24
SLC3A2-213ENST00000539458 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.23
SLC3A2-213ENST00000539458 ITPK1Q13572 414 aa22.76■■□□□ 1.23
SLC3A2-213ENST00000539458 NCBP3Q53F19 620 aaKnown RBP22.76■■□□□ 1.23
SLC3A2-213ENST00000539458 SLC15A2Q16348 729 aa22.75■■□□□ 1.23
SLC3A2-213ENST00000539458 AKT1S1Q96B36 256 aa22.75■■□□□ 1.23
SLC3A2-213ENST00000539458 ZNF827Q17R98 1081 aa22.74■■□□□ 1.23
SLC3A2-213ENST00000539458 VSIG10Q8N0Z9 540 aa22.74■■□□□ 1.23
SLC3A2-213ENST00000539458 CCDC27Q2M243 656 aa22.73■■□□□ 1.23
SLC3A2-213ENST00000539458 LINC00116Q8NCU8 138 aa22.73■■□□□ 1.23
SLC3A2-213ENST00000539458 ZNF496Q96IT1 587 aaPredicted RBP22.73■■□□□ 1.23
SLC3A2-213ENST00000539458 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
SLC3A2-213ENST00000539458 BABAM1Q9NWV8 329 aa22.73■■□□□ 1.23
SLC3A2-213ENST00000539458 QSER1Q2KHR3 1735 aa22.73■■□□□ 1.23
SLC3A2-213ENST00000539458 KCNQ3O43525 872 aa22.72■■□□□ 1.23
SLC3A2-213ENST00000539458 MIS18AQ9NYP9 233 aa22.72■■□□□ 1.23
SLC3A2-213ENST00000539458 HEG1Q9ULI3 1381 aa22.72■■□□□ 1.23
SLC3A2-213ENST00000539458 CALD1Q05682 793 aaKnown RBP22.71■■□□□ 1.23
SLC3A2-213ENST00000539458 NGEFQ8N5V2 710 aa22.7■■□□□ 1.22
SLC3A2-213ENST00000539458 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.22
SLC3A2-213ENST00000539458 CNTNAP4Q9C0A0 1308 aa22.69■■□□□ 1.22
SLC3A2-213ENST00000539458 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
SLC3A2-213ENST00000539458 DNAJC10Q8IXB1 793 aa22.69■■□□□ 1.22
SLC3A2-213ENST00000539458 AK7Q96M32 723 aa22.69■■□□□ 1.22
SLC3A2-213ENST00000539458 TFCP2L1Q9NZI6 479 aa22.69■■□□□ 1.22
SLC3A2-213ENST00000539458 TSPYL4Q9UJ04 414 aa22.69■■□□□ 1.22
SLC3A2-213ENST00000539458 WWC1Q8IX03 1113 aa22.68■■□□□ 1.22
SLC3A2-213ENST00000539458 CASZ1Q86V15 1759 aa22.68■■□□□ 1.22
SLC3A2-213ENST00000539458 CHL1O00533 1208 aa22.67■■□□□ 1.22
SLC3A2-213ENST00000539458 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
SLC3A2-213ENST00000539458 CFAP44Q96MT7 982 aa22.67■■□□□ 1.22
SLC3A2-213ENST00000539458 TEX13AQ9BXU3 409 aaPredicted RBP22.67■■□□□ 1.22
SLC3A2-213ENST00000539458 UBR3Q6ZT12 1888 aa22.66■■□□□ 1.22
SLC3A2-213ENST00000539458 EIF4A1P60842 406 aaKnown RBP22.66■■□□□ 1.22
SLC3A2-213ENST00000539458 ZBTB7AO95365 584 aa22.65■■□□□ 1.22
SLC3A2-213ENST00000539458 ZNF853P0CG23 659 aa22.65■■□□□ 1.22
SLC3A2-213ENST00000539458 CYP19A1P11511 503 aaPredicted RBP22.65■■□□□ 1.22
SLC3A2-213ENST00000539458 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
SLC3A2-213ENST00000539458 IFT57Q9NWB7 429 aa22.65■■□□□ 1.22
SLC3A2-213ENST00000539458 LAS1LQ9Y4W2 734 aaKnown RBP22.65■■□□□ 1.22
SLC3A2-213ENST00000539458 PNPLA7Q6ZV29 1317 aa22.64■■□□□ 1.22
SLC3A2-213ENST00000539458 LAMB4A4D0S4 1761 aa22.64■■□□□ 1.22
SLC3A2-213ENST00000539458 GNPATO15228 680 aa22.64■■□□□ 1.21
SLC3A2-213ENST00000539458 SNRPA1P09661 255 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms