RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SKOR2Q2VWA4 1001 aaPredicted RBP14.7□□□□□ -0.06
CPNE8-203ENST00000538596 DDX49Q9Y6V7 483 aaKnown RBP14.7□□□□□ -0.06
CPNE8-203ENST00000538596 DIP2AQ14689 1571 aa14.7□□□□□ -0.06
CPNE8-203ENST00000538596 REC8O95072 547 aa14.69□□□□□ -0.06
CPNE8-203ENST00000538596 C14orf37Q86TY3 774 aa14.69□□□□□ -0.06
CPNE8-203ENST00000538596 OSBPL3Q9H4L5 887 aa14.69□□□□□ -0.06
CPNE8-203ENST00000538596 LRRFIP2Q9Y608 721 aaKnown RBP14.69□□□□□ -0.06
CPNE8-203ENST00000538596 ST18O60284 1047 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 CCDC30Q5VVM6 783 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 RBM33Q96EV2 1170 aaKnown RBP14.68□□□□□ -0.06
CPNE8-203ENST00000538596 TBX22Q9Y458 520 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 GOLGA6L22H0YM25 854 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 KCNA6P17658 529 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 FOXD4L5Q5VV16 416 aaPredicted RBP14.68□□□□□ -0.06
CPNE8-203ENST00000538596 CLEC17AQ6ZS10 378 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 FOXD4L4Q8WXT5 416 aaPredicted RBP14.68□□□□□ -0.06
CPNE8-203ENST00000538596 RILPL2Q969X0 211 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 LRRCC1Q9C099 1032 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 SALL3Q9BXA9 1300 aa14.68□□□□□ -0.06
CPNE8-203ENST00000538596 CYP2E1P05181 493 aaPredicted RBP14.67□□□□□ -0.06
CPNE8-203ENST00000538596 PHAXQ9H814 394 aaKnown RBP14.67□□□□□ -0.06
CPNE8-203ENST00000538596 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
CPNE8-203ENST00000538596 NCLP19338 710 aaKnown RBP14.67□□□□□ -0.06
CPNE8-203ENST00000538596 UNC5CLQ8IV45 518 aa14.67□□□□□ -0.06
CPNE8-203ENST00000538596 PALD1Q9ULE6 856 aa14.67□□□□□ -0.06
CPNE8-203ENST00000538596 ZDHHC9Q9Y397 364 aa14.67□□□□□ -0.06
CPNE8-203ENST00000538596 TRIM6-TRIM34B2RNG4 842 aa14.67□□□□□ -0.06
CPNE8-203ENST00000538596 MX1P20591 662 aa14.67□□□□□ -0.06
CPNE8-203ENST00000538596 NOL8Q76FK4 1167 aaKnown RBP14.67□□□□□ -0.06
CPNE8-203ENST00000538596 NEK4P51957 841 aa14.66□□□□□ -0.06
CPNE8-203ENST00000538596 ATP8B2P98198 1209 aa14.66□□□□□ -0.06
CPNE8-203ENST00000538596 KLHL40Q2TBA0 621 aa14.66□□□□□ -0.06
CPNE8-203ENST00000538596 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
CPNE8-203ENST00000538596 NUCB2P80303 420 aa14.66□□□□□ -0.06
CPNE8-203ENST00000538596 USP44Q9H0E7 712 aa14.66□□□□□ -0.06
CPNE8-203ENST00000538596 SETD1BQ9UPS6 1966 aaKnown RBP14.66□□□□□ -0.06
CPNE8-203ENST00000538596 GNAI3P08754 354 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 ESYT1Q9BSJ8 1104 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 LMBRD1Q9NUN5 540 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
CPNE8-203ENST00000538596 NWD1Q149M9 1564 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 PTMSP20962 102 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 TAF7Q15545 349 aaPredicted RBP14.65□□□□□ -0.06
CPNE8-203ENST00000538596 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
CPNE8-203ENST00000538596 MAP3K5Q99683 1374 aa14.65□□□□□ -0.06
CPNE8-203ENST00000538596 FAM208AQ9UK61 1670 aaKnown RBP14.65□□□□□ -0.06
CPNE8-203ENST00000538596 EIF2S2P20042 333 aaKnown RBP14.64□□□□□ -0.07
CPNE8-203ENST00000538596 IL25Q9H293 177 aa14.64□□□□□ -0.07
CPNE8-203ENST00000538596 XRN1Q8IZH2 1706 aaKnown RBP14.64□□□□□ -0.07
CPNE8-203ENST00000538596 IBTKQ9P2D0 1353 aaPredicted RBP14.64□□□□□ -0.07
CPNE8-203ENST00000538596 ZBTB7CA1YPR0 619 aa14.64□□□□□ -0.07
CPNE8-203ENST00000538596 HTATSF1O43719 755 aaKnown RBP14.64□□□□□ -0.07
CPNE8-203ENST00000538596 MAP4K4O95819 1239 aaPredicted RBP14.64□□□□□ -0.07
CPNE8-203ENST00000538596 ANO2Q9NQ90 1003 aa14.64□□□□□ -0.07
CPNE8-203ENST00000538596 PRPF40AO75400 957 aaKnown RBP14.63□□□□□ -0.07
CPNE8-203ENST00000538596 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 NUTM1Q86Y26 1132 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 CHMLP26374 656 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
CPNE8-203ENST00000538596 TMX3Q96JJ7 454 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 LRRC37A3O60309 1634 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 SLIT1O75093 1534 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
CPNE8-203ENST00000538596 MARF1Q9Y4F3 1742 aaKnown RBP14.62□□□□□ -0.07
CPNE8-203ENST00000538596 ANXA1P04083 346 aa14.62□□□□□ -0.07
CPNE8-203ENST00000538596 UBTFL1P0CB47 393 aaPredicted RBP14.62□□□□□ -0.07
CPNE8-203ENST00000538596 CLCN1P35523 988 aa14.62□□□□□ -0.07
CPNE8-203ENST00000538596 CWC22Q9HCG8 908 aaKnown RBP14.62□□□□□ -0.07
CPNE8-203ENST00000538596 RBM27Q9P2N5 1060 aaKnown RBP14.62□□□□□ -0.07
CPNE8-203ENST00000538596 ESPNB1AK53 854 aa14.61□□□□□ -0.07
CPNE8-203ENST00000538596 KCNQ3O43525 872 aa14.61□□□□□ -0.07
CPNE8-203ENST00000538596 NASPP49321 788 aaPredicted RBP14.61□□□□□ -0.07
CPNE8-203ENST00000538596 UPF3BQ9BZI7 483 aaKnown RBP14.61□□□□□ -0.07
CPNE8-203ENST00000538596 TUBGCP6Q96RT7 1819 aa14.61□□□□□ -0.07
CPNE8-203ENST00000538596 ZSCAN23Q3MJ62 389 aa14.61□□□□□ -0.07
CPNE8-203ENST00000538596 GPT2Q8TD30 523 aa14.61□□□□□ -0.07
CPNE8-203ENST00000538596 NBPF6Q5VWK0 638 aa14.6□□□□□ -0.07
CPNE8-203ENST00000538596 PPP1R42Q7Z4L9 355 aa14.6□□□□□ -0.07
CPNE8-203ENST00000538596 TRIM44Q96DX7 344 aaPredicted RBP14.6□□□□□ -0.07
CPNE8-203ENST00000538596 NBPF4Q96M43 638 aa14.6□□□□□ -0.07
CPNE8-203ENST00000538596 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
CPNE8-203ENST00000538596 NBPF7P0C2Y1 421 aaPredicted RBP14.6□□□□□ -0.07
CPNE8-203ENST00000538596 SURF6O75683 361 aaKnown RBP14.59□□□□□ -0.07
CPNE8-203ENST00000538596 CHPF2Q9P2E5 772 aa14.59□□□□□ -0.07
CPNE8-203ENST00000538596 STAP2Q9UGK3 403 aa14.59□□□□□ -0.07
CPNE8-203ENST00000538596 NAP1L5Q96NT1 182 aaPredicted RBP14.59□□□□□ -0.07
CPNE8-203ENST00000538596 SOS1Q07889 1333 aaPredicted RBP14.58□□□□□ -0.08
CPNE8-203ENST00000538596 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.08
CPNE8-203ENST00000538596 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.08
CPNE8-203ENST00000538596 SSH3Q8TE77 659 aa14.58□□□□□ -0.08
CPNE8-203ENST00000538596 LRRC59Q96AG4 307 aaKnown RBP14.58□□□□□ -0.08
CPNE8-203ENST00000538596 SRCIN1Q9C0H9 1055 aa14.58□□□□□ -0.08
CPNE8-203ENST00000538596 SRGAP3O43295 1099 aa14.57□□□□□ -0.08
CPNE8-203ENST00000538596 PI4KAP2A4QPH2 592 aa14.57□□□□□ -0.08
CPNE8-203ENST00000538596 PRIM1P49642 420 aaKnown RBP14.57□□□□□ -0.08
CPNE8-203ENST00000538596 EIF4A1P60842 406 aaKnown RBP14.57□□□□□ -0.08
CPNE8-203ENST00000538596 PI4KAP1Q8N8J0 262 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms