RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 BABAM1Q9NWV8 329 aa30.77■■■□□ 2.52
RAB40C-204ENST00000538492 ZNF142P52746 1687 aaPredicted RBP30.77■■■□□ 2.52
RAB40C-204ENST00000538492 CACNA1FO60840 1977 aa30.76■■■□□ 2.52
RAB40C-204ENST00000538492 K7ELQ4 463 aaPredicted RBP30.76■■■□□ 2.51
RAB40C-204ENST00000538492 GNAI3P08754 354 aa30.76■■■□□ 2.51
RAB40C-204ENST00000538492 ORAI2Q96SN7 254 aa30.76■■■□□ 2.51
RAB40C-204ENST00000538492 RGPD2P0DJD1 1756 aa30.75■■■□□ 2.51
RAB40C-204ENST00000538492 PNMA6EA0A0J9YXQ4 647 aa30.75■■■□□ 2.51
RAB40C-204ENST00000538492 PHAXQ9H814 394 aaKnown RBP30.75■■■□□ 2.51
RAB40C-204ENST00000538492 KCNH5Q8NCM2 988 aa30.74■■■□□ 2.51
RAB40C-204ENST00000538492 USP26Q9BXU7 913 aa30.74■■■□□ 2.51
RAB40C-204ENST00000538492 EIF2S2P20042 333 aaKnown RBP30.73■■■□□ 2.51
RAB40C-204ENST00000538492 SOS1Q07889 1333 aaPredicted RBP30.73■■■□□ 2.51
RAB40C-204ENST00000538492 CEMIPQ8WUJ3 1361 aa30.73■■■□□ 2.51
RAB40C-204ENST00000538492 LMOD2Q6P5Q4 547 aa30.73■■■□□ 2.51
RAB40C-204ENST00000538492 CASC1Q6TDU7 716 aa30.73■■■□□ 2.51
RAB40C-204ENST00000538492 LRRFIP2Q9Y608 721 aaKnown RBP30.73■■■□□ 2.51
RAB40C-204ENST00000538492 PDE1AP54750 535 aa30.72■■■□□ 2.51
RAB40C-204ENST00000538492 TSHZ3Q63HK5 1081 aa30.72■■■□□ 2.51
RAB40C-204ENST00000538492 RTN4Q9NQC3 1192 aaKnown RBP30.71■■■□□ 2.51
RAB40C-204ENST00000538492 EIF5BO60841 1220 aaKnown RBP30.71■■■□□ 2.51
RAB40C-204ENST00000538492 GZF1Q9H116 711 aaPredicted RBP30.7■■■□□ 2.51
RAB40C-204ENST00000538492 ATP8B2P98198 1209 aa30.7■■■□□ 2.5
RAB40C-204ENST00000538492 USP44Q9H0E7 712 aa30.7■■■□□ 2.5
RAB40C-204ENST00000538492 LRRCC1Q9C099 1032 aa30.69■■■□□ 2.5
RAB40C-204ENST00000538492 TNPO1Q92973 898 aaKnown RBP30.69■■■□□ 2.5
RAB40C-204ENST00000538492 KCNQ3O43525 872 aa30.68■■■□□ 2.5
RAB40C-204ENST00000538492 GCP02774 474 aa30.68■■■□□ 2.5
RAB40C-204ENST00000538492 EIF4A1P60842 406 aaKnown RBP30.68■■■□□ 2.5
RAB40C-204ENST00000538492 ZNF530Q6P9A1 599 aaPredicted RBP30.68■■■□□ 2.5
RAB40C-204ENST00000538492 OSBPL3Q9H4L5 887 aa30.68■■■□□ 2.5
RAB40C-204ENST00000538492 NPHP4O75161 1426 aaPredicted RBP30.68■■■□□ 2.5
RAB40C-204ENST00000538492 MPRIPQ6WCQ1 1025 aa30.67■■■□□ 2.5
RAB40C-204ENST00000538492 RABEP1Q15276 862 aa30.67■■■□□ 2.5
RAB40C-204ENST00000538492 CIZ1Q9ULV3 898 aaPredicted RBP30.67■■■□□ 2.5
RAB40C-204ENST00000538492 TRAK2O60296 914 aa30.66■■■□□ 2.5
RAB40C-204ENST00000538492 UBTFL1P0CB47 393 aaPredicted RBP30.66■■■□□ 2.5
RAB40C-204ENST00000538492 TEFQ10587 303 aa30.65■■■□□ 2.5
RAB40C-204ENST00000538492 CHPF2Q9P2E5 772 aa30.65■■■□□ 2.5
RAB40C-204ENST00000538492 PXDNLA1KZ92 1463 aa30.64■■■□□ 2.5
RAB40C-204ENST00000538492 ARXQ96QS3 562 aa30.64■■■□□ 2.5
RAB40C-204ENST00000538492 RAB3GAP1Q15042 981 aa30.63■■■□□ 2.49
RAB40C-204ENST00000538492 IBTKQ9P2D0 1353 aaPredicted RBP30.63■■■□□ 2.49
RAB40C-204ENST00000538492 N4BP2Q86UW6 1770 aaPredicted RBP30.63■■■□□ 2.49
RAB40C-204ENST00000538492 BTBD11A6QL63 1104 aa30.63■■■□□ 2.49
RAB40C-204ENST00000538492 AKAP4Q5JQC9 854 aa30.63■■■□□ 2.49
RAB40C-204ENST00000538492 ARHGEF25Q86VW2 580 aa30.63■■■□□ 2.49
RAB40C-204ENST00000538492 MED1Q15648 1581 aaPredicted RBP30.63■■■□□ 2.49
RAB40C-204ENST00000538492 ADAMTSL3P82987 1691 aa30.63■■■□□ 2.49
RAB40C-204ENST00000538492 SALL3Q9BXA9 1300 aa30.63■■■□□ 2.49
RAB40C-204ENST00000538492 DDX11L8A8MPP1 907 aa30.62■■■□□ 2.49
RAB40C-204ENST00000538492 MX1P20591 662 aa30.62■■■□□ 2.49
RAB40C-204ENST00000538492 PLEKHO1Q53GL0 409 aaPredicted RBP30.62■■■□□ 2.49
RAB40C-204ENST00000538492 REC8O95072 547 aa30.62■■■□□ 2.49
RAB40C-204ENST00000538492 ANXA1P04083 346 aa30.62■■■□□ 2.49
RAB40C-204ENST00000538492 ERC2O15083 957 aa30.61■■■□□ 2.49
RAB40C-204ENST00000538492 SRCIN1Q9C0H9 1055 aa30.61■■■□□ 2.49
RAB40C-204ENST00000538492 PHRF1Q9P1Y6 1649 aaKnown RBP30.6■■■□□ 2.49
RAB40C-204ENST00000538492 KDM3BQ7LBC6 1761 aa30.6■■■□□ 2.49
RAB40C-204ENST00000538492 ANKRD24Q8TF21 1146 aa30.6■■■□□ 2.49
RAB40C-204ENST00000538492 LMO7Q8WWI1 1683 aa30.59■■■□□ 2.49
RAB40C-204ENST00000538492 PXDNQ92626 1479 aa30.59■■■□□ 2.49
RAB40C-204ENST00000538492 PI4KAP2A4QPH2 592 aa30.58■■■□□ 2.49
RAB40C-204ENST00000538492 C1orf141Q5JVX7 400 aa30.58■■■□□ 2.49
RAB40C-204ENST00000538492 PI4KAP1Q8N8J0 262 aa30.58■■■□□ 2.49
RAB40C-204ENST00000538492 IL1RAPL2Q9NP60 686 aa30.57■■■□□ 2.48
RAB40C-204ENST00000538492 AXIN2Q9Y2T1 843 aa30.57■■■□□ 2.48
RAB40C-204ENST00000538492 GBP4Q96PP9 640 aa30.57■■■□□ 2.48
RAB40C-204ENST00000538492 TRIM6-TRIM34B2RNG4 842 aa30.56■■■□□ 2.48
RAB40C-204ENST00000538492 HOXB7P09629 217 aa30.56■■■□□ 2.48
RAB40C-204ENST00000538492 NBPF7P0C2Y1 421 aaPredicted RBP30.56■■■□□ 2.48
RAB40C-204ENST00000538492 AMOTQ4VCS5 1084 aa30.56■■■□□ 2.48
RAB40C-204ENST00000538492 PPP1R42Q7Z4L9 355 aa30.56■■■□□ 2.48
RAB40C-204ENST00000538492 PROSER2Q86WR7 435 aaPredicted RBP30.56■■■□□ 2.48
RAB40C-204ENST00000538492 RILPL2Q969X0 211 aa30.56■■■□□ 2.48
RAB40C-204ENST00000538492 SSH3Q8TE77 659 aa30.56■■■□□ 2.48
RAB40C-204ENST00000538492 AK9Q5TCS8 1911 aa30.55■■■□□ 2.48
RAB40C-204ENST00000538492 RNMTO43148 476 aaKnown RBP30.55■■■□□ 2.48
RAB40C-204ENST00000538492 KRT28Q7Z3Y7 464 aa30.55■■■□□ 2.48
RAB40C-204ENST00000538492 SSFA2P28290 1259 aa30.55■■■□□ 2.48
RAB40C-204ENST00000538492 DNAAF4Q8WXU2 420 aa30.55■■■□□ 2.48
RAB40C-204ENST00000538492 SLIT3O75094 1523 aa30.54■■■□□ 2.48
RAB40C-204ENST00000538492 TUBGCP6Q96RT7 1819 aa30.54■■■□□ 2.48
RAB40C-204ENST00000538492 L1TD1Q5T7N2 865 aaKnown RBP30.53■■■□□ 2.48
RAB40C-204ENST00000538492 SURF6O75683 361 aaKnown RBP30.53■■■□□ 2.48
RAB40C-204ENST00000538492 BEND3Q5T5X7 828 aa30.53■■■□□ 2.48
RAB40C-204ENST00000538492 GOLGA6L3A6NEY3 463 aa30.52■■■□□ 2.48
RAB40C-204ENST00000538492 SRGAP3O43295 1099 aa30.52■■■□□ 2.48
RAB40C-204ENST00000538492 ST18O60284 1047 aa30.51■■■□□ 2.47
RAB40C-204ENST00000538492 NUTM1Q86Y26 1132 aa30.51■■■□□ 2.47
RAB40C-204ENST00000538492 ESYT1Q9BSJ8 1104 aa30.51■■■□□ 2.47
RAB40C-204ENST00000538492 UNC5CLQ8IV45 518 aa30.51■■■□□ 2.47
RAB40C-204ENST00000538492 STAP2Q9UGK3 403 aa30.5■■■□□ 2.47
RAB40C-204ENST00000538492 ZC3H6P61129 1189 aaKnown RBP30.49■■■□□ 2.47
RAB40C-204ENST00000538492 ADCY9O60503 1353 aa30.49■■■□□ 2.47
RAB40C-204ENST00000538492 TRPM3Q9HCF6 1732 aaPredicted RBP30.48■■■□□ 2.47
RAB40C-204ENST00000538492 PRAMEF22A3QJZ6 481 aa30.48■■■□□ 2.47
RAB40C-204ENST00000538492 CHMLP26374 656 aa30.48■■■□□ 2.47
RAB40C-204ENST00000538492 POLA2Q14181 598 aa30.48■■■□□ 2.47
RAB40C-204ENST00000538492 CHMP4AQ9BY43 222 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms