RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
CPSF7-217ENST00000537162 ZC3H4Q9UPT8 1303 aaKnown RBP14□□□□□ -0.17
CPSF7-217ENST00000537162 GNPATO15228 680 aa14□□□□□ -0.17
CPSF7-217ENST00000537162 CHRNA5P30532 468 aa14□□□□□ -0.17
CPSF7-217ENST00000537162 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
CPSF7-217ENST00000537162 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
CPSF7-217ENST00000537162 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
CPSF7-217ENST00000537162 ITPK1Q13572 414 aa13.98□□□□□ -0.17
CPSF7-217ENST00000537162 TSKSQ9UJT2 592 aa13.98□□□□□ -0.17
CPSF7-217ENST00000537162 LMNB1P20700 586 aa13.97□□□□□ -0.17
CPSF7-217ENST00000537162 TMF1P82094 1093 aa13.97□□□□□ -0.17
CPSF7-217ENST00000537162 PRPF38BQ5VTL8 546 aaKnown RBP13.97□□□□□ -0.17
CPSF7-217ENST00000537162 MON2Q7Z3U7 1717 aa13.96□□□□□ -0.17
CPSF7-217ENST00000537162 NME9Q86XW9 330 aa13.96□□□□□ -0.17
CPSF7-217ENST00000537162 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
CPSF7-217ENST00000537162 CENPJQ9HC77 1338 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-217ENST00000537162 THSD7BQ9C0I4 1608 aa13.95□□□□□ -0.18
CPSF7-217ENST00000537162 TMEM88BA6NKF7 163 aa13.95□□□□□ -0.18
CPSF7-217ENST00000537162 NBPF1Q3BBV0 1214 aa13.95□□□□□ -0.18
CPSF7-217ENST00000537162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF7-217ENST00000537162 NLGN1Q8N2Q7 840 aa13.95□□□□□ -0.18
CPSF7-217ENST00000537162 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-217ENST00000537162 LTBP1Q14766 1721 aa13.95□□□□□ -0.18
CPSF7-217ENST00000537162 WDR33Q9C0J8 1336 aaKnown RBP13.94□□□□□ -0.18
CPSF7-217ENST00000537162 GYS1P13807 737 aa13.94□□□□□ -0.18
CPSF7-217ENST00000537162 MAP2K1Q02750 393 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-217ENST00000537162 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
CPSF7-217ENST00000537162 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
CPSF7-217ENST00000537162 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
CPSF7-217ENST00000537162 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-217ENST00000537162 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
CPSF7-217ENST00000537162 SIK1P57059 783 aa13.93□□□□□ -0.18
CPSF7-217ENST00000537162 PIGBQ92521 554 aa13.93□□□□□ -0.18
CPSF7-217ENST00000537162 IP6K1Q92551 441 aa13.93□□□□□ -0.18
CPSF7-217ENST00000537162 CASP8AP2Q9UKL3 1982 aa13.92□□□□□ -0.18
CPSF7-217ENST00000537162 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
CPSF7-217ENST00000537162 SOX10P56693 466 aa13.92□□□□□ -0.18
CPSF7-217ENST00000537162 DEFB115Q30KQ5 88 aa13.92□□□□□ -0.18
CPSF7-217ENST00000537162 SMARCC1Q92922 1105 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-217ENST00000537162 NFKBIEO00221 500 aa13.91□□□□□ -0.18
CPSF7-217ENST00000537162 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
CPSF7-217ENST00000537162 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
CPSF7-217ENST00000537162 DDR1Q08345 913 aa13.9□□□□□ -0.18
CPSF7-217ENST00000537162 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
CPSF7-217ENST00000537162 DICER1Q9UPY3 1922 aaKnown RBP13.9□□□□□ -0.18
CPSF7-217ENST00000537162 CYP27B1O15528 508 aa13.88□□□□□ -0.19
CPSF7-217ENST00000537162 DDNO94850 711 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-217ENST00000537162 DGKZQ13574 1117 aa13.88□□□□□ -0.19
CPSF7-217ENST00000537162 DPY19L2Q6NUT2 758 aa13.88□□□□□ -0.19
CPSF7-217ENST00000537162 DLEC1Q9Y238 1755 aa13.88□□□□□ -0.19
CPSF7-217ENST00000537162 ATP6V1AP38606 617 aa13.87□□□□□ -0.19
CPSF7-217ENST00000537162 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
CPSF7-217ENST00000537162 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
CPSF7-217ENST00000537162 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
CPSF7-217ENST00000537162 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
CPSF7-217ENST00000537162 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
CPSF7-217ENST00000537162 FBLN1P23142 703 aa13.86□□□□□ -0.19
CPSF7-217ENST00000537162 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
CPSF7-217ENST00000537162 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
CPSF7-217ENST00000537162 COL5A3P25940 1745 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-217ENST00000537162 HOXC9P31274 260 aa13.85□□□□□ -0.19
CPSF7-217ENST00000537162 STAC3Q96MF2 364 aa13.85□□□□□ -0.19
CPSF7-217ENST00000537162 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-217ENST00000537162 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
CPSF7-217ENST00000537162 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
CPSF7-217ENST00000537162 PCDH11YQ9BZA8 1340 aa13.85□□□□□ -0.19
CPSF7-217ENST00000537162 FKBP8Q14318 412 aa13.84□□□□□ -0.19
CPSF7-217ENST00000537162 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
CPSF7-217ENST00000537162 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
CPSF7-217ENST00000537162 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
CPSF7-217ENST00000537162 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
CPSF7-217ENST00000537162 MYH14Q7Z406 1995 aaKnown RBP13.83□□□□□ -0.19
CPSF7-217ENST00000537162 RFC4P35249 363 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 GRM1Q13255 1194 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 ERFEQ4G0M1 354 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 CYP4F22Q6NT55 531 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-217ENST00000537162 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 BEGAINQ9BUH8 593 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-217ENST00000537162 MAP3K19Q56UN5 1328 aa13.83□□□□□ -0.2
CPSF7-217ENST00000537162 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
CPSF7-217ENST00000537162 FMR1Q06787 632 aaKnown RBP eCLIP13.82□□□□□ -0.2
CPSF7-217ENST00000537162 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
CPSF7-217ENST00000537162 SCN4AP35499 1836 aa13.82□□□□□ -0.2
CPSF7-217ENST00000537162 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
CPSF7-217ENST00000537162 POLRMTO00411 1230 aaKnown RBP13.81□□□□□ -0.2
CPSF7-217ENST00000537162 AOC2O75106 756 aa13.81□□□□□ -0.2
CPSF7-217ENST00000537162 RAPGEF4Q8WZA2 1011 aa13.81□□□□□ -0.2
CPSF7-217ENST00000537162 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-217ENST00000537162 CGNL1Q0VF96 1302 aa13.81□□□□□ -0.2
CPSF7-217ENST00000537162 KDRP35968 1356 aa13.81□□□□□ -0.2
CPSF7-217ENST00000537162 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-217ENST00000537162 EAPPQ56P03 285 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-217ENST00000537162 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-217ENST00000537162 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
CPSF7-217ENST00000537162 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
CPSF7-217ENST00000537162 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-217ENST00000537162 DLL1O00548 723 aa13.78□□□□□ -0.2
CPSF7-217ENST00000537162 CNTROBQ8N137 903 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms