RNA–Protein interactions for RNA: ENST00000536780.6

MIR9-3HG-201, Transcript of MIR9-3 host gene, humanhuman

TSL 3 BASIC

Gene MIR9-3HG, Length 4,778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-201ENST00000536780 PLEKHG3A1L390 1219 aa16.53■□□□□ 0.24
MIR9-3HG-201ENST00000536780 MBD3O95983 291 aa16.53■□□□□ 0.24
MIR9-3HG-201ENST00000536780 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
MIR9-3HG-201ENST00000536780 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
MIR9-3HG-201ENST00000536780 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
MIR9-3HG-201ENST00000536780 HECW2Q9P2P5 1572 aa16.53■□□□□ 0.24
MIR9-3HG-201ENST00000536780 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
MIR9-3HG-201ENST00000536780 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 EYA1Q99502 592 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 A0A087WZG4 1122 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 HOXC9P31274 260 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 KDM6BO15054 1643 aa16.51■□□□□ 0.23
MIR9-3HG-201ENST00000536780 METTL24Q5JXM2 366 aa16.5■□□□□ 0.23
MIR9-3HG-201ENST00000536780 RAD21O60216 631 aa16.5■□□□□ 0.23
MIR9-3HG-201ENST00000536780 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
MIR9-3HG-201ENST00000536780 MRPL50Q8N5N7 158 aaKnown RBP16.5■□□□□ 0.23
MIR9-3HG-201ENST00000536780 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
MIR9-3HG-201ENST00000536780 MAP3K5Q99683 1374 aa16.5■□□□□ 0.23
MIR9-3HG-201ENST00000536780 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
MIR9-3HG-201ENST00000536780 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
MIR9-3HG-201ENST00000536780 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ZPR1O75312 459 aa16.49■□□□□ 0.23
MIR9-3HG-201ENST00000536780 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 TPM3P06753 285 aa16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 SASS6Q6UVJ0 657 aa16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
MIR9-3HG-201ENST00000536780 VAMP4O75379 141 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 TPM2P07951 284 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 IL13P35225 146 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 HSPA2P54652 639 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 TRMT112Q9UI30 125 aaKnown RBP16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 PHACTR3Q96KR7 559 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 TPM1P09493 284 aa16.47■□□□□ 0.23
MIR9-3HG-201ENST00000536780 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ANKRD20A12PQ8NF67 263 aa16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 CREBRFQ8IUR6 639 aa16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
MIR9-3HG-201ENST00000536780 IL2RBP14784 551 aa16.46■□□□□ 0.22
MIR9-3HG-201ENST00000536780 LTKP29376 864 aa16.46■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.22
MIR9-3HG-201ENST00000536780 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ZBTB3Q9H5J0 574 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 KDM5AP29375 1690 aaKnown RBP16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 TRAK2O60296 914 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 RRP12Q5JTH9 1297 aaKnown RBP16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 LRP2BPQ9P2M1 347 aa16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 TRIM22Q8IYM9 498 aa16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ARHGAP31Q2M1Z3 1444 aa16.44■□□□□ 0.22
MIR9-3HG-201ENST00000536780 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 IGHDP01880 384 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 CDKL5O76039 1030 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 FOSBP53539 338 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 NUCB1Q02818 461 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 CAVIN4Q5BKX8 364 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 EVI5LQ96CN4 794 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
MIR9-3HG-201ENST00000536780 TET3O43151 1660 aa16.42■□□□□ 0.22
MIR9-3HG-201ENST00000536780 ERVK-7P63135 1459 aa16.42■□□□□ 0.22
MIR9-3HG-201ENST00000536780 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms