RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TUBGCP6Q96RT7 1819 aa19.16■□□□□ 0.66
UBE3B-206ENST00000536398 MSH5O43196 834 aa19.16■□□□□ 0.66
UBE3B-206ENST00000536398 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
UBE3B-206ENST00000536398 C5P01031 1676 aa19.15■□□□□ 0.66
UBE3B-206ENST00000536398 RNMTO43148 476 aaKnown RBP19.15■□□□□ 0.66
UBE3B-206ENST00000536398 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
UBE3B-206ENST00000536398 RSPH6AQ9H0K4 717 aa19.15■□□□□ 0.66
UBE3B-206ENST00000536398 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
UBE3B-206ENST00000536398 PRKAR2BP31323 418 aa19.14■□□□□ 0.65
UBE3B-206ENST00000536398 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
UBE3B-206ENST00000536398 AK7Q96M32 723 aa19.14■□□□□ 0.65
UBE3B-206ENST00000536398 TAF1LQ8IZX4 1826 aa19.14■□□□□ 0.65
UBE3B-206ENST00000536398 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
UBE3B-206ENST00000536398 SLC16A10Q8TF71 515 aa19.13■□□□□ 0.65
UBE3B-206ENST00000536398 SLC52A2Q9HAB3 445 aa19.13■□□□□ 0.65
UBE3B-206ENST00000536398 NUDCQ9Y266 331 aa19.13■□□□□ 0.65
UBE3B-206ENST00000536398 C4BP0C0L5 1744 aa19.12■□□□□ 0.65
UBE3B-206ENST00000536398 PHF14O94880 888 aa19.12■□□□□ 0.65
UBE3B-206ENST00000536398 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
UBE3B-206ENST00000536398 MSL1Q68DK7 614 aa19.11■□□□□ 0.65
UBE3B-206ENST00000536398 ARXQ96QS3 562 aa19.11■□□□□ 0.65
UBE3B-206ENST00000536398 SLC39A6Q13433 755 aa19.1■□□□□ 0.65
UBE3B-206ENST00000536398 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
UBE3B-206ENST00000536398 FHDC1Q9C0D6 1143 aaPredicted RBP19.1■□□□□ 0.65
UBE3B-206ENST00000536398 SCN11AQ9UI33 1791 aa19.1■□□□□ 0.65
UBE3B-206ENST00000536398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.09■□□□□ 0.65
UBE3B-206ENST00000536398 GNPATO15228 680 aa19.09■□□□□ 0.65
UBE3B-206ENST00000536398 GAS2L2Q8NHY3 880 aa19.09■□□□□ 0.65
UBE3B-206ENST00000536398 GNAT3A8MTJ3 354 aa19.08■□□□□ 0.64
UBE3B-206ENST00000536398 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
UBE3B-206ENST00000536398 MAP3K5Q99683 1374 aa19.07■□□□□ 0.64
UBE3B-206ENST00000536398 FCHSD2O94868 740 aa19.07■□□□□ 0.64
UBE3B-206ENST00000536398 HMGB2P26583 209 aaKnown RBP19.07■□□□□ 0.64
UBE3B-206ENST00000536398 SYT17Q9BSW7 474 aa19.07■□□□□ 0.64
UBE3B-206ENST00000536398 MRC1P22897 1456 aa19.06■□□□□ 0.64
UBE3B-206ENST00000536398 POLD1P28340 1107 aa19.06■□□□□ 0.64
UBE3B-206ENST00000536398 RALBP1Q15311 655 aa19.06■□□□□ 0.64
UBE3B-206ENST00000536398 FLAD1Q8NFF5 587 aa19.06■□□□□ 0.64
UBE3B-206ENST00000536398 SSFA2P28290 1259 aa19.05■□□□□ 0.64
UBE3B-206ENST00000536398 UBR3Q6ZT12 1888 aa19.05■□□□□ 0.64
UBE3B-206ENST00000536398 ADAMTS7Q9UKP4 1686 aa19.05■□□□□ 0.64
UBE3B-206ENST00000536398 RC3H1Q5TC82 1133 aaKnown RBP19.03■□□□□ 0.64
UBE3B-206ENST00000536398 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
UBE3B-206ENST00000536398 KLHL34Q8N239 644 aa19.03■□□□□ 0.64
UBE3B-206ENST00000536398 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
UBE3B-206ENST00000536398 CNTNAP4Q9C0A0 1308 aa19.02■□□□□ 0.64
UBE3B-206ENST00000536398 CRKLP46109 303 aaKnown RBP19.02■□□□□ 0.64
UBE3B-206ENST00000536398 TEFQ10587 303 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 DCTN1Q14203 1278 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 INTS5Q6P9B9 1019 aaKnown RBP19.01■□□□□ 0.63
UBE3B-206ENST00000536398 MCM10Q7L590 875 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 ARHGEF1Q92888 912 aaKnown RBP19.01■□□□□ 0.63
UBE3B-206ENST00000536398 PLEKHF1Q96S99 279 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
UBE3B-206ENST00000536398 VIRMAQ69YN4 1812 aaKnown RBP19.01■□□□□ 0.63
UBE3B-206ENST00000536398 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
UBE3B-206ENST00000536398 KCPQ6ZWJ8 1503 aa19■□□□□ 0.63
UBE3B-206ENST00000536398 KCNQ3O43525 872 aa19■□□□□ 0.63
UBE3B-206ENST00000536398 RPS6KA4O75676 772 aa19■□□□□ 0.63
UBE3B-206ENST00000536398 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
UBE3B-206ENST00000536398 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
UBE3B-206ENST00000536398 NLGN2Q8NFZ4 835 aa18.99■□□□□ 0.63
UBE3B-206ENST00000536398 COL5A3P25940 1745 aaPredicted RBP18.99■□□□□ 0.63
UBE3B-206ENST00000536398 TJP1Q07157 1748 aa18.99■□□□□ 0.63
UBE3B-206ENST00000536398 UTRNP46939 3433 aa18.99■□□□□ 0.63
UBE3B-206ENST00000536398 CYP19A1P11511 503 aaPredicted RBP18.98■□□□□ 0.63
UBE3B-206ENST00000536398 ZNF790Q6PG37 636 aa18.97■□□□□ 0.63
UBE3B-206ENST00000536398 TTC5Q8N0Z6 440 aa18.97■□□□□ 0.63
UBE3B-206ENST00000536398 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
UBE3B-206ENST00000536398 ZNF496Q96IT1 587 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-206ENST00000536398 BTBD11A6QL63 1104 aa18.96■□□□□ 0.63
UBE3B-206ENST00000536398 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
UBE3B-206ENST00000536398 ADRA2BP18089 450 aa18.95■□□□□ 0.62
UBE3B-206ENST00000536398 RFC4P35249 363 aa18.95■□□□□ 0.62
UBE3B-206ENST00000536398 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
UBE3B-206ENST00000536398 CCDC87Q9NVE4 849 aa18.95■□□□□ 0.62
UBE3B-206ENST00000536398 SRP68Q9UHB9 627 aaKnown RBP18.95■□□□□ 0.62
UBE3B-206ENST00000536398 GYS1P13807 737 aa18.94■□□□□ 0.62
UBE3B-206ENST00000536398 SIPA1L3O60292 1781 aaPredicted RBP18.93■□□□□ 0.62
UBE3B-206ENST00000536398 HTATSF1O43719 755 aaKnown RBP18.93■□□□□ 0.62
UBE3B-206ENST00000536398 MMP10P09238 476 aa18.93■□□□□ 0.62
UBE3B-206ENST00000536398 NFE2L2Q16236 605 aa18.93■□□□□ 0.62
UBE3B-206ENST00000536398 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
UBE3B-206ENST00000536398 ZBTB1Q9Y2K1 713 aa18.93■□□□□ 0.62
UBE3B-206ENST00000536398 GOLGB1Q14789 3259 aaKnown RBP18.93■□□□□ 0.62
UBE3B-206ENST00000536398 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
UBE3B-206ENST00000536398 NEFMP07197 916 aa18.92■□□□□ 0.62
UBE3B-206ENST00000536398 THUMPD2Q9BTF0 503 aaKnown RBP18.92■□□□□ 0.62
UBE3B-206ENST00000536398 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
UBE3B-206ENST00000536398 CICQ96RK0 1608 aaPredicted RBP18.92■□□□□ 0.62
UBE3B-206ENST00000536398 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
UBE3B-206ENST00000536398 UBR2Q8IWV8 1755 aa18.91■□□□□ 0.62
UBE3B-206ENST00000536398 PRAMEF22A3QJZ6 481 aa18.91■□□□□ 0.62
UBE3B-206ENST00000536398 ZNF316A6NFI3 1004 aaPredicted RBP18.91■□□□□ 0.62
UBE3B-206ENST00000536398 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
UBE3B-206ENST00000536398 FKBP8Q14318 412 aa18.91■□□□□ 0.62
UBE3B-206ENST00000536398 FMNL2Q96PY5 1086 aa18.91■□□□□ 0.62
UBE3B-206ENST00000536398 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms