RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HDGFL1Q5TGJ6 251 aa16.64■□□□□ 0.25
VPS33B-202ENST00000535906 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
VPS33B-202ENST00000535906 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
VPS33B-202ENST00000535906 APBB1O00213 710 aa16.64■□□□□ 0.25
VPS33B-202ENST00000535906 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
VPS33B-202ENST00000535906 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
VPS33B-202ENST00000535906 TMEM94Q12767 1356 aa16.63■□□□□ 0.25
VPS33B-202ENST00000535906 LMO7Q8WWI1 1683 aa16.63■□□□□ 0.25
VPS33B-202ENST00000535906 KCNQ3O43525 872 aa16.63■□□□□ 0.25
VPS33B-202ENST00000535906 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
VPS33B-202ENST00000535906 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
VPS33B-202ENST00000535906 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
VPS33B-202ENST00000535906 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
VPS33B-202ENST00000535906 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
VPS33B-202ENST00000535906 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
VPS33B-202ENST00000535906 ATF3P18847 181 aa16.62■□□□□ 0.25
VPS33B-202ENST00000535906 RBM25P49756 843 aaKnown RBP16.62■□□□□ 0.25
VPS33B-202ENST00000535906 AMOTQ4VCS5 1084 aa16.62■□□□□ 0.25
VPS33B-202ENST00000535906 PXDNQ92626 1479 aa16.62■□□□□ 0.25
VPS33B-202ENST00000535906 MST1RQ04912 1400 aa16.62■□□□□ 0.25
VPS33B-202ENST00000535906 GNAI2P04899 355 aa16.62■□□□□ 0.25
VPS33B-202ENST00000535906 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
VPS33B-202ENST00000535906 RGPD5Q99666 1765 aa16.62■□□□□ 0.25
VPS33B-202ENST00000535906 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
VPS33B-202ENST00000535906 TEFQ10587 303 aa16.61■□□□□ 0.25
VPS33B-202ENST00000535906 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
VPS33B-202ENST00000535906 ALS2Q96Q42 1657 aa16.61■□□□□ 0.25
VPS33B-202ENST00000535906 HMMRO75330 724 aa16.61■□□□□ 0.25
VPS33B-202ENST00000535906 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
VPS33B-202ENST00000535906 TTC22Q5TAA0 569 aa16.6■□□□□ 0.25
VPS33B-202ENST00000535906 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
VPS33B-202ENST00000535906 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
VPS33B-202ENST00000535906 GNAI3P08754 354 aa16.59■□□□□ 0.25
VPS33B-202ENST00000535906 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
VPS33B-202ENST00000535906 ERBB3P21860 1342 aa16.59■□□□□ 0.25
VPS33B-202ENST00000535906 CDC45O75419 566 aa16.59■□□□□ 0.25
VPS33B-202ENST00000535906 HOXB7P09629 217 aa16.58■□□□□ 0.25
VPS33B-202ENST00000535906 USP44Q9H0E7 712 aa16.58■□□□□ 0.25
VPS33B-202ENST00000535906 CHPF2Q9P2E5 772 aa16.58■□□□□ 0.25
VPS33B-202ENST00000535906 PNMA6EA0A0J9YXQ4 647 aa16.58■□□□□ 0.24
VPS33B-202ENST00000535906 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
VPS33B-202ENST00000535906 PXDNLA1KZ92 1463 aa16.58■□□□□ 0.24
VPS33B-202ENST00000535906 HSPA2P54652 639 aa16.57■□□□□ 0.24
VPS33B-202ENST00000535906 SPRYD3Q8NCJ5 442 aa16.57■□□□□ 0.24
VPS33B-202ENST00000535906 KIF2CQ99661 725 aa16.57■□□□□ 0.24
VPS33B-202ENST00000535906 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
VPS33B-202ENST00000535906 DCCP43146 1447 aa16.56■□□□□ 0.24
VPS33B-202ENST00000535906 ATP8B2P98198 1209 aa16.56■□□□□ 0.24
VPS33B-202ENST00000535906 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
VPS33B-202ENST00000535906 ANXA1P04083 346 aa16.55■□□□□ 0.24
VPS33B-202ENST00000535906 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
VPS33B-202ENST00000535906 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
VPS33B-202ENST00000535906 SDSP20132 328 aa16.55■□□□□ 0.24
VPS33B-202ENST00000535906 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
VPS33B-202ENST00000535906 OVOS2A0A0G2JMS6 1433 aa16.54■□□□□ 0.24
VPS33B-202ENST00000535906 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
VPS33B-202ENST00000535906 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
VPS33B-202ENST00000535906 PDE1AP54750 535 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
VPS33B-202ENST00000535906 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
VPS33B-202ENST00000535906 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.24
VPS33B-202ENST00000535906 SNX21Q969T3 373 aa16.52■□□□□ 0.24
VPS33B-202ENST00000535906 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.24
VPS33B-202ENST00000535906 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.23
VPS33B-202ENST00000535906 BEND3Q5T5X7 828 aa16.51■□□□□ 0.23
VPS33B-202ENST00000535906 IL27Q8NEV9 243 aa16.51■□□□□ 0.23
VPS33B-202ENST00000535906 DNAAF4Q8WXU2 420 aa16.51■□□□□ 0.23
VPS33B-202ENST00000535906 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
VPS33B-202ENST00000535906 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
VPS33B-202ENST00000535906 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
VPS33B-202ENST00000535906 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
VPS33B-202ENST00000535906 COL18A1P39060 1754 aa16.51■□□□□ 0.23
VPS33B-202ENST00000535906 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
VPS33B-202ENST00000535906 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 ADCY9O60503 1353 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 PROSER3Q2NL68 480 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
VPS33B-202ENST00000535906 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 TNS3Q68CZ2 1445 aa16.5■□□□□ 0.23
VPS33B-202ENST00000535906 TSHZ3Q63HK5 1081 aa16.49■□□□□ 0.23
VPS33B-202ENST00000535906 CRYBG1Q9Y4K1 1723 aa16.49■□□□□ 0.23
VPS33B-202ENST00000535906 CD2BP2O95400 341 aaKnown RBP16.49■□□□□ 0.23
VPS33B-202ENST00000535906 SSH3Q8TE77 659 aa16.49■□□□□ 0.23
VPS33B-202ENST00000535906 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
VPS33B-202ENST00000535906 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
VPS33B-202ENST00000535906 MEGF6O75095 1541 aa16.48■□□□□ 0.23
VPS33B-202ENST00000535906 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
VPS33B-202ENST00000535906 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
VPS33B-202ENST00000535906 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
VPS33B-202ENST00000535906 CSB-PGBD3P0DP91 1061 aa16.47■□□□□ 0.23
VPS33B-202ENST00000535906 TATP17735 454 aaPredicted RBP16.47■□□□□ 0.23
VPS33B-202ENST00000535906 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms