RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 TEFQ10587 303 aa11.52□□□□□ -0.56
LINC00943-203ENST00000535544 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.56
LINC00943-203ENST00000535544 AKAP4Q5JQC9 854 aa11.52□□□□□ -0.56
LINC00943-203ENST00000535544 ATP10DQ9P241 1426 aa11.52□□□□□ -0.57
LINC00943-203ENST00000535544 CSB-PGBD3P0DP91 1061 aa11.52□□□□□ -0.57
LINC00943-203ENST00000535544 STK31Q9BXU1 1019 aa11.52□□□□□ -0.57
LINC00943-203ENST00000535544 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
LINC00943-203ENST00000535544 VIRMAQ69YN4 1812 aaKnown RBP11.52□□□□□ -0.57
LINC00943-203ENST00000535544 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
LINC00943-203ENST00000535544 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
LINC00943-203ENST00000535544 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
LINC00943-203ENST00000535544 PTPRCP08575 1304 aa11.51□□□□□ -0.57
LINC00943-203ENST00000535544 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
LINC00943-203ENST00000535544 TSHZ3Q63HK5 1081 aa11.51□□□□□ -0.57
LINC00943-203ENST00000535544 NFATC2IPQ8NCF5 419 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 NPHP3Q7Z494 1330 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 ANKRD44Q8N8A2 993 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 DCTPP1Q9H773 170 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 EXOC6BQ9Y2D4 811 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
LINC00943-203ENST00000535544 PI4KAP2A4QPH2 592 aa11.49□□□□□ -0.57
LINC00943-203ENST00000535544 CYP27B1O15528 508 aa11.49□□□□□ -0.57
LINC00943-203ENST00000535544 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
LINC00943-203ENST00000535544 PI4KAP1Q8N8J0 262 aa11.49□□□□□ -0.57
LINC00943-203ENST00000535544 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
LINC00943-203ENST00000535544 MEGF6O75095 1541 aa11.49□□□□□ -0.57
LINC00943-203ENST00000535544 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
LINC00943-203ENST00000535544 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
LINC00943-203ENST00000535544 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
LINC00943-203ENST00000535544 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
LINC00943-203ENST00000535544 USP35Q9P2H5 1018 aa11.48□□□□□ -0.57
LINC00943-203ENST00000535544 LRRFIP2Q9Y608 721 aaKnown RBP11.48□□□□□ -0.57
LINC00943-203ENST00000535544 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
LINC00943-203ENST00000535544 PHRF1Q9P1Y6 1649 aaKnown RBP11.47□□□□□ -0.57
LINC00943-203ENST00000535544 COL18A1P39060 1754 aa11.47□□□□□ -0.57
LINC00943-203ENST00000535544 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
LINC00943-203ENST00000535544 AIMP1Q12904 312 aaKnown RBP11.47□□□□□ -0.57
LINC00943-203ENST00000535544 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
LINC00943-203ENST00000535544 TBC1D32Q96NH3 1257 aa11.47□□□□□ -0.57
LINC00943-203ENST00000535544 FAM208AQ9UK61 1670 aaKnown RBP11.47□□□□□ -0.57
LINC00943-203ENST00000535544 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.57
LINC00943-203ENST00000535544 KIF1AQ12756 1690 aa11.46□□□□□ -0.57
LINC00943-203ENST00000535544 PHKG2P15735 406 aa11.46□□□□□ -0.57
LINC00943-203ENST00000535544 NCAPD2Q15021 1401 aa11.46□□□□□ -0.57
LINC00943-203ENST00000535544 HAP1P54257 671 aaPredicted RBP11.46□□□□□ -0.58
LINC00943-203ENST00000535544 STRN4Q9NRL3 753 aa11.46□□□□□ -0.58
LINC00943-203ENST00000535544 KDM6AO15550 1401 aaPredicted RBP11.46□□□□□ -0.58
LINC00943-203ENST00000535544 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
LINC00943-203ENST00000535544 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
LINC00943-203ENST00000535544 MYL6BP14649 208 aa11.45□□□□□ -0.58
LINC00943-203ENST00000535544 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
LINC00943-203ENST00000535544 CWF19L2Q2TBE0 894 aaKnown RBP11.45□□□□□ -0.58
LINC00943-203ENST00000535544 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
LINC00943-203ENST00000535544 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
LINC00943-203ENST00000535544 PRDM11Q9NQV5 511 aa11.45□□□□□ -0.58
LINC00943-203ENST00000535544 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
LINC00943-203ENST00000535544 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
LINC00943-203ENST00000535544 SLKQ9H2G2 1235 aaPredicted RBP11.45□□□□□ -0.58
LINC00943-203ENST00000535544 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 GNAI2P04899 355 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
LINC00943-203ENST00000535544 PDIA6Q15084 440 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
LINC00943-203ENST00000535544 C22orf23Q9BZE7 217 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 CAMTA1Q9Y6Y1 1673 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
LINC00943-203ENST00000535544 DCCP43146 1447 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
LINC00943-203ENST00000535544 ADCY9O60503 1353 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 BEND3Q5T5X7 828 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 TOM1L2Q6ZVM7 507 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
LINC00943-203ENST00000535544 SLC52A2Q9HAB3 445 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 IL1RAPL2Q9NP60 686 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 DDRGK1Q96HY6 314 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 TBC1D2Q9BYX2 928 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
LINC00943-203ENST00000535544 BABAM1Q9NWV8 329 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
LINC00943-203ENST00000535544 SOS2Q07890 1332 aaPredicted RBP11.43□□□□□ -0.58
LINC00943-203ENST00000535544 BMP2KLQ5H9B9 411 aa11.42□□□□□ -0.58
LINC00943-203ENST00000535544 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
LINC00943-203ENST00000535544 DNAAF4Q8WXU2 420 aa11.42□□□□□ -0.58
LINC00943-203ENST00000535544 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 PPP1R42Q7Z4L9 355 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 IFNL2Q8IZJ0 200 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 SRCIN1Q9C0H9 1055 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
LINC00943-203ENST00000535544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.41□□□□□ -0.58
LINC00943-203ENST00000535544 EP400Q96L91 3159 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 CD2BP2O95400 341 aaKnown RBP11.41□□□□□ -0.58
LINC00943-203ENST00000535544 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
LINC00943-203ENST00000535544 SDSP20132 328 aa11.41□□□□□ -0.58
LINC00943-203ENST00000535544 NCOA3Q9Y6Q9 1424 aa11.4□□□□□ -0.58
LINC00943-203ENST00000535544 TTC22Q5TAA0 569 aa11.4□□□□□ -0.58
LINC00943-203ENST00000535544 KIF2CQ99661 725 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms