RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 ZFYVE9O95405 1425 aa16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 FIBPO43427 364 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 ESYT1Q9BSJ8 1104 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 TTC21BQ7Z4L5 1316 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 DIP2CQ9Y2E4 1556 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 FLIIQ13045 1269 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 PPP1R9BQ96SB3 815 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 USP25Q9UHP3 1055 aa16.93■□□□□ 0.3
LPCAT3-203ENST00000535479 NEURL4Q96JN8 1562 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 UQCRHP07919 91 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 EYA1Q99502 592 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 TTC12Q9H892 705 aaPredicted RBP16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 KCNQ3O43525 872 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 GNAI2P04899 355 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
LPCAT3-203ENST00000535479 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
LPCAT3-203ENST00000535479 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
LPCAT3-203ENST00000535479 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
LPCAT3-203ENST00000535479 CHMLP26374 656 aa16.91■□□□□ 0.3
LPCAT3-203ENST00000535479 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
LPCAT3-203ENST00000535479 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
LPCAT3-203ENST00000535479 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
LPCAT3-203ENST00000535479 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
LPCAT3-203ENST00000535479 LARGE1O95461 756 aa16.9■□□□□ 0.3
LPCAT3-203ENST00000535479 ZNF445P59923 1031 aa16.9■□□□□ 0.3
LPCAT3-203ENST00000535479 FERMT3Q86UX7 667 aa16.9■□□□□ 0.3
LPCAT3-203ENST00000535479 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 HCLS1P14317 486 aaPredicted RBP16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 HMMRO75330 724 aa16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 LRSAM1Q6UWE0 723 aa16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 SPC24Q8NBT2 197 aa16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 PA2G4Q9UQ80 394 aaKnown RBP16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
LPCAT3-203ENST00000535479 SETD1BQ9UPS6 1966 aaKnown RBP16.88■□□□□ 0.29
LPCAT3-203ENST00000535479 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
LPCAT3-203ENST00000535479 FOSBP53539 338 aa16.88■□□□□ 0.29
LPCAT3-203ENST00000535479 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
LPCAT3-203ENST00000535479 NLRP6P59044 892 aa16.88■□□□□ 0.29
LPCAT3-203ENST00000535479 RRP9O43818 475 aaKnown RBP16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 OFD1O75665 1012 aa16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 NDUFB9Q9Y6M9 179 aa16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
LPCAT3-203ENST00000535479 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.299e-7■■■□□ 17
LPCAT3-203ENST00000535479 PRAMEF22A3QJZ6 481 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 LTKP29376 864 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 CPSF1Q10570 1443 aaKnown RBP16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 CHGBP05060 677 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
LPCAT3-203ENST00000535479 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
LPCAT3-203ENST00000535479 CAMK4Q16566 473 aa16.85■□□□□ 0.29
LPCAT3-203ENST00000535479 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
LPCAT3-203ENST00000535479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
LPCAT3-203ENST00000535479 UBTFL1P0CB47 393 aaPredicted RBP16.85■□□□□ 0.29
LPCAT3-203ENST00000535479 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
LPCAT3-203ENST00000535479 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 BRD1O95696 1058 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 SIL1Q9H173 461 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
LPCAT3-203ENST00000535479 TCHHQ07283 1943 aa16.83■□□□□ 0.29
LPCAT3-203ENST00000535479 AK2P54819 239 aa16.83■□□□□ 0.29
LPCAT3-203ENST00000535479 KLHDC4Q8TBB5 520 aa16.83■□□□□ 0.29
LPCAT3-203ENST00000535479 CWC22Q9HCG8 908 aaKnown RBP16.83■□□□□ 0.29
LPCAT3-203ENST00000535479 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.29
LPCAT3-203ENST00000535479 NOL7Q9UMY1 257 aaKnown RBP16.83■□□□□ 0.29
LPCAT3-203ENST00000535479 A2ML1A8K2U0 1454 aa16.83■□□□□ 0.28
LPCAT3-203ENST00000535479 AIMP1Q12904 312 aaKnown RBP16.83■□□□□ 0.28
LPCAT3-203ENST00000535479 STK3Q13188 491 aa16.83■□□□□ 0.28
LPCAT3-203ENST00000535479 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
LPCAT3-203ENST00000535479 CASTP20810 708 aaKnown RBP16.83■□□□□ 0.28
LPCAT3-203ENST00000535479 ZKSCAN5Q9Y2L8 839 aa16.83■□□□□ 0.28
LPCAT3-203ENST00000535479 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 CRB1P82279 1406 aa16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 PTH1RQ03431 593 aa16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 DNM1Q05193 864 aaKnown RBP16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 TAF6LQ9Y6J9 622 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms