RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 NF2P35240 595 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 UBE4AQ14139 1066 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 CCDC8Q9H0W5 538 aaPredicted RBP14.81□□□□□ -0.04
SPG11-203ENST00000535302 ANKRD1Q15327 319 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 AEBP1Q8IUX7 1158 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
SPG11-203ENST00000535302 CA8P35219 290 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 KRT85P78386 507 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 SNAPC4Q5SXM2 1469 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 ZSCAN25Q6NSZ9 544 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 ANKRD18AQ8IVF6 992 aa14.81□□□□□ -0.04
SPG11-203ENST00000535302 CTNNBL1Q8WYA6 563 aaPredicted RBP14.81□□□□□ -0.04
SPG11-203ENST00000535302 MACROD2A1Z1Q3 448 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 NFE2L2Q16236 605 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 WDR33Q9C0J8 1336 aaKnown RBP14.8□□□□□ -0.04
SPG11-203ENST00000535302 EMILIN1Q9Y6C2 1016 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 STIM1Q13586 685 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
SPG11-203ENST00000535302 ANKIB1Q9P2G1 1089 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 CEBPAP49715 358 aaPredicted RBP14.8□□□□□ -0.04
SPG11-203ENST00000535302 JMYQ8N9B5 988 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 BACH2Q9BYV9 841 aa14.8□□□□□ -0.04
SPG11-203ENST00000535302 TERF1P54274 439 aa14.79□□□□□ -0.04
SPG11-203ENST00000535302 TMOD3Q9NYL9 352 aa14.79□□□□□ -0.04
SPG11-203ENST00000535302 NOL7Q9UMY1 257 aaKnown RBP14.79□□□□□ -0.04
SPG11-203ENST00000535302 ANAPC15P60006 121 aa14.79□□□□□ -0.04
SPG11-203ENST00000535302 GPTP24298 496 aa14.79□□□□□ -0.04
SPG11-203ENST00000535302 EIF5P55010 431 aaKnown RBP14.79□□□□□ -0.04
SPG11-203ENST00000535302 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 DAPK1P53355 1430 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 TTLL12Q14166 644 aaPredicted RBP14.78□□□□□ -0.04
SPG11-203ENST00000535302 POLR3DP05423 398 aaPredicted RBP14.78□□□□□ -0.04
SPG11-203ENST00000535302 RAB11FIP4Q86YS3 637 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 CFAP45Q9UL16 551 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 GRM1Q13255 1194 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 DYDC1Q8WWB3 177 aa14.78□□□□□ -0.04
SPG11-203ENST00000535302 IMMTQ16891 758 aaKnown RBP14.77□□□□□ -0.04
SPG11-203ENST00000535302 SYCE3A1L190 88 aa14.77□□□□□ -0.04
SPG11-203ENST00000535302 FBLN1P23142 703 aa14.77□□□□□ -0.04
SPG11-203ENST00000535302 CCDC144CPQ8IYA2 1237 aa14.77□□□□□ -0.04
SPG11-203ENST00000535302 GRPEL1Q9HAV7 217 aa14.77□□□□□ -0.04
SPG11-203ENST00000535302 FBXO31Q5XUX0 539 aaPredicted RBP14.77□□□□□ -0.05
SPG11-203ENST00000535302 TSHZ3Q63HK5 1081 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 HFM1A2PYH4 1435 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 STARD3NLO95772 234 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 CCDC178Q5BJE1 867 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 WWC3Q9ULE0 1092 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 ANKRD30BQ9BXX2 1392 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 EHBP1L1Q8N3D4 1523 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 FCHSD2O94868 740 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 EZRP15311 586 aaKnown RBP14.77□□□□□ -0.05
SPG11-203ENST00000535302 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
SPG11-203ENST00000535302 ISM2Q6H9L7 571 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 CEP57L1Q8IYX8 460 aa14.77□□□□□ -0.05
SPG11-203ENST00000535302 CCDC66A2RUB6 948 aa14.76□□□□□ -0.05
SPG11-203ENST00000535302 FOXO3O43524 673 aa14.76□□□□□ -0.05
SPG11-203ENST00000535302 ZPR1O75312 459 aa14.76□□□□□ -0.05
SPG11-203ENST00000535302 MAP2K1Q02750 393 aaPredicted RBP14.76□□□□□ -0.05
SPG11-203ENST00000535302 NUP62CLQ9H1M0 184 aa14.76□□□□□ -0.05
SPG11-203ENST00000535302 SLFN5Q08AF3 891 aa14.76□□□□□ -0.05
SPG11-203ENST00000535302 SPTY2D1Q68D10 685 aaPredicted RBP14.76□□□□□ -0.05
SPG11-203ENST00000535302 ZBTB3Q9H5J0 574 aa14.75□□□□□ -0.05
SPG11-203ENST00000535302 SLC52A1Q9NWF4 448 aa14.75□□□□□ -0.05
SPG11-203ENST00000535302 MX1P20591 662 aa14.75□□□□□ -0.05
SPG11-203ENST00000535302 CRACR2BQ8N4Y2 399 aaPredicted RBP14.75□□□□□ -0.05
SPG11-203ENST00000535302 CPLX3Q8WVH0 158 aa14.75□□□□□ -0.05
SPG11-203ENST00000535302 MMRN2Q9H8L6 949 aa14.75□□□□□ -0.05
SPG11-203ENST00000535302 DACH1Q9UI36 760 aa14.75□□□□□ -0.05
SPG11-203ENST00000535302 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
SPG11-203ENST00000535302 IFIT1P09914 478 aaKnown RBP14.74□□□□□ -0.05
SPG11-203ENST00000535302 CBX1P83916 185 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.74□□□□□ -0.05
SPG11-203ENST00000535302 MKNK2Q9HBH9 465 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 ARHGEF11O15085 1522 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 SSH1Q8WYL5 1049 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 COMMD10Q9Y6G5 202 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 CDKL5O76039 1030 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 PIP4K2AP48426 406 aaPredicted RBP14.74□□□□□ -0.05
SPG11-203ENST00000535302 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
SPG11-203ENST00000535302 POLR3GO15318 223 aaPredicted RBP14.74□□□□□ -0.05
SPG11-203ENST00000535302 TMEM87AQ8NBN3 555 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 TRMT112Q9UI30 125 aaKnown RBP14.74□□□□□ -0.05
SPG11-203ENST00000535302 CTNNA3Q9UI47 895 aa14.74□□□□□ -0.05
SPG11-203ENST00000535302 CFAP100Q494V2 611 aa14.73□□□□□ -0.05
SPG11-203ENST00000535302 ATP5J2-PTCD1G3V325 749 aa14.73□□□□□ -0.05
SPG11-203ENST00000535302 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
SPG11-203ENST00000535302 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
SPG11-203ENST00000535302 CCP110O43303 1012 aa14.73□□□□□ -0.05
SPG11-203ENST00000535302 EPB41L2O43491 1005 aaKnown RBP14.73□□□□□ -0.05
SPG11-203ENST00000535302 GOLGA6L7A0A1B0GV03 622 aa14.72□□□□□ -0.05
SPG11-203ENST00000535302 DZIP1Q86YF9 867 aaKnown RBP14.72□□□□□ -0.05
SPG11-203ENST00000535302 CAVIN4Q5BKX8 364 aa14.72□□□□□ -0.05
SPG11-203ENST00000535302 SNRKQ9NRH2 765 aa14.72□□□□□ -0.05
SPG11-203ENST00000535302 ATAD2Q6PL18 1390 aa14.72□□□□□ -0.05
SPG11-203ENST00000535302 CCDC96Q2M329 555 aa14.72□□□□□ -0.05
SPG11-203ENST00000535302 TRMT1Q9NXH9 659 aaKnown RBP14.72□□□□□ -0.05
SPG11-203ENST00000535302 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms