RNA–Protein interactions for RNA: ENST00000535112.1

LDHB-207, Transcript of lactate dehydrogenase B, humanhuman

TSL 5

Gene LDHB, Length 252 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-207ENST00000535112 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
LDHB-207ENST00000535112 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
LDHB-207ENST00000535112 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 ASAP1Q9ULH1 1129 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 KDM3BQ7LBC6 1761 aa13.63□□□□□ -0.23
LDHB-207ENST00000535112 PRKRIP1Q9H875 184 aaPredicted RBP13.62□□□□□ -0.23
LDHB-207ENST00000535112 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
LDHB-207ENST00000535112 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
LDHB-207ENST00000535112 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
LDHB-207ENST00000535112 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
LDHB-207ENST00000535112 RNMTO43148 476 aaKnown RBP13.6□□□□□ -0.23
LDHB-207ENST00000535112 CABP4P57796 275 aa13.6□□□□□ -0.23
LDHB-207ENST00000535112 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
LDHB-207ENST00000535112 LAMB4A4D0S4 1761 aa13.6□□□□□ -0.23
LDHB-207ENST00000535112 LOC102724428A0A0B4J2F2 783 aa13.59□□□□□ -0.23
LDHB-207ENST00000535112 SIK1P57059 783 aa13.59□□□□□ -0.23
LDHB-207ENST00000535112 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
LDHB-207ENST00000535112 SLC52A2Q9HAB3 445 aa13.59□□□□□ -0.23
LDHB-207ENST00000535112 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
LDHB-207ENST00000535112 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
LDHB-207ENST00000535112 FCHSD2O94868 740 aa13.58□□□□□ -0.24
LDHB-207ENST00000535112 ITPK1Q13572 414 aa13.58□□□□□ -0.24
LDHB-207ENST00000535112 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
LDHB-207ENST00000535112 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.24
LDHB-207ENST00000535112 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
LDHB-207ENST00000535112 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
LDHB-207ENST00000535112 AMIGO3Q86WK7 504 aa13.56□□□□□ -0.24
LDHB-207ENST00000535112 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
LDHB-207ENST00000535112 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
LDHB-207ENST00000535112 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
LDHB-207ENST00000535112 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
LDHB-207ENST00000535112 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
LDHB-207ENST00000535112 TFCP2L1Q9NZI6 479 aa13.55□□□□□ -0.24
LDHB-207ENST00000535112 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
LDHB-207ENST00000535112 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
LDHB-207ENST00000535112 MCM10Q7L590 875 aa13.53□□□□□ -0.24
LDHB-207ENST00000535112 AK7Q96M32 723 aa13.53□□□□□ -0.24
LDHB-207ENST00000535112 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
LDHB-207ENST00000535112 TEFQ10587 303 aa13.52□□□□□ -0.25
LDHB-207ENST00000535112 DCTN1Q14203 1278 aa13.52□□□□□ -0.25
LDHB-207ENST00000535112 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
LDHB-207ENST00000535112 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
LDHB-207ENST00000535112 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
LDHB-207ENST00000535112 BCORQ6W2J9 1755 aa13.52□□□□□ -0.25
LDHB-207ENST00000535112 PTGER2P43116 358 aa13.51□□□□□ -0.25
LDHB-207ENST00000535112 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
LDHB-207ENST00000535112 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
LDHB-207ENST00000535112 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
LDHB-207ENST00000535112 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
LDHB-207ENST00000535112 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
LDHB-207ENST00000535112 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
LDHB-207ENST00000535112 GNPATO15228 680 aa13.5□□□□□ -0.25
LDHB-207ENST00000535112 PHF14O94880 888 aa13.5□□□□□ -0.25
LDHB-207ENST00000535112 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
LDHB-207ENST00000535112 SGIP1Q9BQI5 828 aa13.5□□□□□ -0.25
LDHB-207ENST00000535112 KIF13BQ9NQT8 1826 aa13.49□□□□□ -0.25
LDHB-207ENST00000535112 NEFMP07197 916 aa13.49□□□□□ -0.25
LDHB-207ENST00000535112 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
LDHB-207ENST00000535112 RTF1Q92541 710 aaKnown RBP13.49□□□□□ -0.25
LDHB-207ENST00000535112 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
LDHB-207ENST00000535112 HEG1Q9ULI3 1381 aa13.48□□□□□ -0.25
LDHB-207ENST00000535112 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
LDHB-207ENST00000535112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
LDHB-207ENST00000535112 MSH5O43196 834 aa13.48□□□□□ -0.25
LDHB-207ENST00000535112 KCNQ3O43525 872 aa13.48□□□□□ -0.25
LDHB-207ENST00000535112 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
LDHB-207ENST00000535112 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
LDHB-207ENST00000535112 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
LDHB-207ENST00000535112 ANP32CO43423 234 aa13.47□□□□□ -0.25
LDHB-207ENST00000535112 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
LDHB-207ENST00000535112 SSFA2P28290 1259 aa13.47□□□□□ -0.25
LDHB-207ENST00000535112 CRKLP46109 303 aaKnown RBP13.47□□□□□ -0.25
LDHB-207ENST00000535112 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
LDHB-207ENST00000535112 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
LDHB-207ENST00000535112 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
LDHB-207ENST00000535112 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
LDHB-207ENST00000535112 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
LDHB-207ENST00000535112 GOLGB1Q14789 3259 aaKnown RBP13.46□□□□□ -0.25
LDHB-207ENST00000535112 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
LDHB-207ENST00000535112 HMGB2P26583 209 aaKnown RBP13.46□□□□□ -0.25
LDHB-207ENST00000535112 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
LDHB-207ENST00000535112 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
LDHB-207ENST00000535112 RRP7AQ9Y3A4 280 aaKnown RBP13.46□□□□□ -0.25
LDHB-207ENST00000535112 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
LDHB-207ENST00000535112 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
LDHB-207ENST00000535112 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
LDHB-207ENST00000535112 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
LDHB-207ENST00000535112 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
LDHB-207ENST00000535112 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
LDHB-207ENST00000535112 RIPK4P57078 832 aa13.44□□□□□ -0.26
LDHB-207ENST00000535112 INTS5Q6P9B9 1019 aaKnown RBP13.44□□□□□ -0.26
LDHB-207ENST00000535112 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
LDHB-207ENST00000535112 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
LDHB-207ENST00000535112 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
LDHB-207ENST00000535112 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
LDHB-207ENST00000535112 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms