RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 GAS2L3Q86XJ1 694 aa20.65■□□□□ 0.9
PDZD3-214ENST00000534790 HOXC9P31274 260 aa20.64■□□□□ 0.9
PDZD3-214ENST00000534790 CEBPAP49715 358 aaPredicted RBP20.64■□□□□ 0.9
PDZD3-214ENST00000534790 NLRP6P59044 892 aa20.64■□□□□ 0.9
PDZD3-214ENST00000534790 GLIPR1L2Q4G1C9 344 aa20.64■□□□□ 0.89
PDZD3-214ENST00000534790 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.89
PDZD3-214ENST00000534790 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
PDZD3-214ENST00000534790 ERC2O15083 957 aa20.63■□□□□ 0.89
PDZD3-214ENST00000534790 FOXD4L1Q9NU39 408 aa20.63■□□□□ 0.89
PDZD3-214ENST00000534790 ERBB4Q15303 1308 aa20.63■□□□□ 0.89
PDZD3-214ENST00000534790 PHRF1Q9P1Y6 1649 aaKnown RBP20.62■□□□□ 0.89
PDZD3-214ENST00000534790 EPB41L2O43491 1005 aaKnown RBP20.62■□□□□ 0.89
PDZD3-214ENST00000534790 AOX1Q06278 1338 aa20.62■□□□□ 0.89
PDZD3-214ENST00000534790 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
PDZD3-214ENST00000534790 FLIIQ13045 1269 aa20.61■□□□□ 0.89
PDZD3-214ENST00000534790 TAF7Q15545 349 aaPredicted RBP20.61■□□□□ 0.89
PDZD3-214ENST00000534790 FOXO3O43524 673 aa20.61■□□□□ 0.89
PDZD3-214ENST00000534790 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
PDZD3-214ENST00000534790 HOXB7P09629 217 aa20.61■□□□□ 0.89
PDZD3-214ENST00000534790 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
PDZD3-214ENST00000534790 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 SOX12O15370 315 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 MCM2P49736 904 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 PDE1AP54750 535 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 ATP8B2P98198 1209 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 CHD2O14647 1828 aaKnown RBP20.6■□□□□ 0.89
PDZD3-214ENST00000534790 LTN1O94822 1766 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
PDZD3-214ENST00000534790 G2E3Q7L622 706 aa20.59■□□□□ 0.89
PDZD3-214ENST00000534790 ZNF142P52746 1687 aaPredicted RBP20.59■□□□□ 0.89
PDZD3-214ENST00000534790 RRP9O43818 475 aaKnown RBP20.59■□□□□ 0.89
PDZD3-214ENST00000534790 HSP90AA2PQ14568 343 aaPredicted RBP20.59■□□□□ 0.89
PDZD3-214ENST00000534790 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.89
PDZD3-214ENST00000534790 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
PDZD3-214ENST00000534790 MCCP23508 829 aa20.58■□□□□ 0.88
PDZD3-214ENST00000534790 SSFA2P28290 1259 aa20.58■□□□□ 0.88
PDZD3-214ENST00000534790 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.88
PDZD3-214ENST00000534790 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.88
PDZD3-214ENST00000534790 CCDC173Q0VFZ6 552 aa20.57■□□□□ 0.88
PDZD3-214ENST00000534790 MIS18AQ9NYP9 233 aa20.57■□□□□ 0.88
PDZD3-214ENST00000534790 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
PDZD3-214ENST00000534790 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
PDZD3-214ENST00000534790 ANAPC15P60006 121 aa20.56■□□□□ 0.88
PDZD3-214ENST00000534790 ABTB2Q8N961 1025 aa20.56■□□□□ 0.88
PDZD3-214ENST00000534790 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
PDZD3-214ENST00000534790 ANP32BQ92688 251 aaKnown RBP20.56■□□□□ 0.88
PDZD3-214ENST00000534790 CEMIPQ8WUJ3 1361 aa20.56■□□□□ 0.88
PDZD3-214ENST00000534790 KDM3BQ7LBC6 1761 aa20.55■□□□□ 0.88
PDZD3-214ENST00000534790 F6X3S4 739 aa20.55■□□□□ 0.88
PDZD3-214ENST00000534790 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
PDZD3-214ENST00000534790 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
PDZD3-214ENST00000534790 IL17RAQ96F46 866 aa20.55■□□□□ 0.88
PDZD3-214ENST00000534790 DDX49Q9Y6V7 483 aaKnown RBP20.55■□□□□ 0.88
PDZD3-214ENST00000534790 LMO7Q8WWI1 1683 aa20.55■□□□□ 0.88
PDZD3-214ENST00000534790 NASPP49321 788 aaPredicted RBP20.54■□□□□ 0.88
PDZD3-214ENST00000534790 NFAT5O94916 1531 aa20.54■□□□□ 0.88
PDZD3-214ENST00000534790 KCNA6P17658 529 aa20.54■□□□□ 0.88
PDZD3-214ENST00000534790 IP6K1Q92551 441 aa20.54■□□□□ 0.88
PDZD3-214ENST00000534790 OVOS2A0A0G2JMS6 1433 aa20.53■□□□□ 0.88
PDZD3-214ENST00000534790 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
PDZD3-214ENST00000534790 MX1P20591 662 aa20.53■□□□□ 0.88
PDZD3-214ENST00000534790 KCNH5Q8NCM2 988 aa20.53■□□□□ 0.88
PDZD3-214ENST00000534790 AK9Q5TCS8 1911 aa20.53■□□□□ 0.88
PDZD3-214ENST00000534790 BAG4O95429 457 aaKnown RBP20.53■□□□□ 0.88
PDZD3-214ENST00000534790 IL17REQ8NFR9 667 aa20.53■□□□□ 0.88
PDZD3-214ENST00000534790 PPP1R9BQ96SB3 815 aa20.52■□□□□ 0.88
PDZD3-214ENST00000534790 NCAPD2Q15021 1401 aa20.52■□□□□ 0.88
PDZD3-214ENST00000534790 PHF8Q9UPP1 1060 aa20.52■□□□□ 0.88
PDZD3-214ENST00000534790 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
PDZD3-214ENST00000534790 APBB1O00213 710 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 ANKLE2Q86XL3 938 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 ESYT1Q9BSJ8 1104 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 LMTK3Q96Q04 1460 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 SSH3Q8TE77 659 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 TPM2P07951 284 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 HDAC5Q9UQL6 1122 aa20.5■□□□□ 0.87
PDZD3-214ENST00000534790 HSP90AB4PQ58FF6 505 aa20.49■□□□□ 0.87
PDZD3-214ENST00000534790 EXOC6BQ9Y2D4 811 aa20.49■□□□□ 0.87
PDZD3-214ENST00000534790 ZSCAN30Q86W11 494 aa20.48■□□□□ 0.87
PDZD3-214ENST00000534790 USP44Q9H0E7 712 aa20.47■□□□□ 0.87
PDZD3-214ENST00000534790 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
PDZD3-214ENST00000534790 POLA2Q14181 598 aa20.46■□□□□ 0.87
PDZD3-214ENST00000534790 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
PDZD3-214ENST00000534790 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
PDZD3-214ENST00000534790 INTS4Q96HW7 963 aaKnown RBP20.46■□□□□ 0.87
PDZD3-214ENST00000534790 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
PDZD3-214ENST00000534790 CHMLP26374 656 aa20.45■□□□□ 0.86
PDZD3-214ENST00000534790 ZNF445P59923 1031 aa20.45■□□□□ 0.86
PDZD3-214ENST00000534790 MSNP26038 577 aaKnown RBP20.45■□□□□ 0.86
PDZD3-214ENST00000534790 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
PDZD3-214ENST00000534790 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
PDZD3-214ENST00000534790 EIF4A1P60842 406 aaKnown RBP20.44■□□□□ 0.86
PDZD3-214ENST00000534790 CAMTA1Q9Y6Y1 1673 aa20.44■□□□□ 0.86
PDZD3-214ENST00000534790 SLIT3O75094 1523 aa20.44■□□□□ 0.86
PDZD3-214ENST00000534790 NCLP19338 710 aaKnown RBP20.43■□□□□ 0.86
PDZD3-214ENST00000534790 CUL4AQ13619 759 aa20.43■□□□□ 0.86
PDZD3-214ENST00000534790 KIF1BPQ96EK5 621 aa20.43■□□□□ 0.86
PDZD3-214ENST00000534790 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms