RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
RAG1-203ENST00000534663 CCT4P50991 539 aaKnown RBP8.26□□□□□ -1.09
RAG1-203ENST00000534663 PTCH1Q13635 1447 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 GOLGA6L4A6NEF3 574 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 ANXA1P04083 346 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 FLIIQ13045 1269 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 ZFYVE9O95405 1425 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 INO80Q9ULG1 1556 aaPredicted RBP8.25□□□□□ -1.09
RAG1-203ENST00000534663 SETBP1Q9Y6X0 1596 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 PNPLA6Q8IY17 1366 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 CHL1O00533 1208 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 ADCY5O95622 1261 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
RAG1-203ENST00000534663 GNAI3P08754 354 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 CHMLP26374 656 aa8.25□□□□□ -1.09
RAG1-203ENST00000534663 MTHFSDQ2M296 383 aaKnown RBP8.25□□□□□ -1.09
RAG1-203ENST00000534663 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
RAG1-203ENST00000534663 WDR33Q9C0J8 1336 aaKnown RBP8.24□□□□□ -1.09
RAG1-203ENST00000534663 SRGAP3O43295 1099 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 MCM2P49736 904 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 CAMK4Q16566 473 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 CCDC83Q8IWF9 413 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 USHBP1Q8N6Y0 703 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 SLC26A8Q96RN1 970 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 DIAPH3Q9NSV4 1193 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 DEPDC5O75140 1603 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 MROH1Q8NDA8 1641 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 ADGRB2O60241 1585 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 CFAP74Q9C0B2 1584 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 CAMSAP1Q5T5Y3 1602 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 FAM69CQ0P6D2 419 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 ZHX1Q9UKY1 873 aaPredicted RBP8.24□□□□□ -1.09
RAG1-203ENST00000534663 VWDEQ8N2E2 1590 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 PTPRCP08575 1304 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 COL3A1P02461 1466 aaPredicted RBP8.24□□□□□ -1.09
RAG1-203ENST00000534663 CASTP20810 708 aaKnown RBP8.24□□□□□ -1.09
RAG1-203ENST00000534663 SASS6Q6UVJ0 657 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 TCEANC2Q96MN5 208 aa8.24□□□□□ -1.09
RAG1-203ENST00000534663 BRD1O95696 1058 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 CBX1P83916 185 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 HDGFL1Q5TGJ6 251 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 NAP1L2Q9ULW6 460 aaPredicted RBP8.23□□□□□ -1.09
RAG1-203ENST00000534663 FOSBP53539 338 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 CHAF1AQ13111 956 aaPredicted RBP8.23□□□□□ -1.09
RAG1-203ENST00000534663 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.23□□□□□ -1.09
RAG1-203ENST00000534663 KIDINS220Q9ULH0 1771 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 MED14O60244 1454 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 NLRP6P59044 892 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 CLEC17AQ6ZS10 378 aa8.23□□□□□ -1.09
RAG1-203ENST00000534663 ACEP12821 1306 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 STK3Q13188 491 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 FAM173BQ6P4H8 233 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 PPP1R42Q7Z4L9 355 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 NECAB1Q8N987 351 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 FBXW7Q969H0 707 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 IL25Q9H293 177 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 PHAXQ9H814 394 aaKnown RBP8.22□□□□□ -1.09
RAG1-203ENST00000534663 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
RAG1-203ENST00000534663 ABCC3O15438 1527 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 ZNF500O60304 480 aaPredicted RBP8.22□□□□□ -1.09
RAG1-203ENST00000534663 HS1BP3Q53T59 392 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 PRPF40BQ6NWY9 871 aaKnown RBP8.22□□□□□ -1.09
RAG1-203ENST00000534663 PDLIM2Q96JY6 352 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 JAKMIP1Q96N16 626 aaKnown RBP8.22□□□□□ -1.09
RAG1-203ENST00000534663 YEATS2Q9ULM3 1422 aa8.22□□□□□ -1.09
RAG1-203ENST00000534663 DNM1Q05193 864 aaKnown RBP8.21□□□□□ -1.09
RAG1-203ENST00000534663 PIK3R4Q99570 1358 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 CD163L1Q9NR16 1453 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 FRMPD1Q5SYB0 1578 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 MYO3AQ8NEV4 1616 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.09
RAG1-203ENST00000534663 PPLO60437 1756 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 SPDYE4A6NLX3 237 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 STX6O43752 255 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 AK2P54819 239 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 FGD1P98174 961 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 NOLC1Q14978 699 aaKnown RBP eCLIP8.21□□□□□ -1.09
RAG1-203ENST00000534663 CKAP2LQ8IYA6 745 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 ZNF592Q92610 1267 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.09
RAG1-203ENST00000534663 IGSF3O75054 1194 aa8.21□□□□□ -1.1
RAG1-203ENST00000534663 MAP7D2Q96T17 732 aa8.21□□□□□ -1.1
RAG1-203ENST00000534663 TTC21BQ7Z4L5 1316 aa8.21□□□□□ -1.1
RAG1-203ENST00000534663 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 SYT1P21579 422 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 ATP8B2P98198 1209 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 CEBPZQ03701 1054 aaKnown RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 CCDC183Q5T5S1 534 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 CNTROBQ8N137 903 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 ATP10DQ9P241 1426 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 MAP2P11137 1827 aaKnown RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 RICTORQ6R327 1708 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 ARAP3Q8WWN8 1544 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 DYNC1I1O14576 645 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 TAF7Q15545 349 aaPredicted RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 SIL1Q9H173 461 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms