RNA–Protein interactions for RNA: ENST00000534657.5

LMO7-226, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-226ENST00000534657 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
LMO7-226ENST00000534657 TMEM57Q8N5G2 664 aa11.3□□□□□ -0.6
LMO7-226ENST00000534657 TSPYL6Q8N831 410 aa11.3□□□□□ -0.6
LMO7-226ENST00000534657 ABTB2Q8N961 1025 aa11.3□□□□□ -0.6
LMO7-226ENST00000534657 FAM83GA6ND36 823 aa11.29□□□□□ -0.6
LMO7-226ENST00000534657 MTHFSDQ2M296 383 aaKnown RBP11.29□□□□□ -0.6
LMO7-226ENST00000534657 C8orf58Q8NAV2 365 aa11.29□□□□□ -0.6
LMO7-226ENST00000534657 IPO9Q96P70 1041 aaKnown RBP11.29□□□□□ -0.6
LMO7-226ENST00000534657 ANP32EQ9BTT0 268 aa11.29□□□□□ -0.6
LMO7-226ENST00000534657 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
LMO7-226ENST00000534657 C19orf44Q9H6X5 657 aa11.29□□□□□ -0.6
LMO7-226ENST00000534657 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
LMO7-226ENST00000534657 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
LMO7-226ENST00000534657 FAM208AQ9UK61 1670 aaKnown RBP11.28□□□□□ -0.6
LMO7-226ENST00000534657 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
LMO7-226ENST00000534657 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
LMO7-226ENST00000534657 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
LMO7-226ENST00000534657 ARHGEF25Q86VW2 580 aa11.27□□□□□ -0.61
LMO7-226ENST00000534657 SLC39A7Q92504 469 aa11.27□□□□□ -0.61
LMO7-226ENST00000534657 XIRP1Q702N8 1843 aaKnown RBP11.27□□□□□ -0.61
LMO7-226ENST00000534657 PTPRCP08575 1304 aa11.27□□□□□ -0.61
LMO7-226ENST00000534657 COL18A1P39060 1754 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
LMO7-226ENST00000534657 LHX8Q68G74 356 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 ITPRIPQ8IWB1 547 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
LMO7-226ENST00000534657 C7P10643 843 aa11.25□□□□□ -0.61
LMO7-226ENST00000534657 PSME1Q06323 249 aa11.25□□□□□ -0.61
LMO7-226ENST00000534657 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
LMO7-226ENST00000534657 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
LMO7-226ENST00000534657 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
LMO7-226ENST00000534657 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 GNAT3A8MTJ3 354 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 PSEN1P49768 467 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 MYT1Q01538 1121 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 MCM10Q7L590 875 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 RTF1Q92541 710 aaKnown RBP11.24□□□□□ -0.61
LMO7-226ENST00000534657 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
LMO7-226ENST00000534657 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
LMO7-226ENST00000534657 PXDNLA1KZ92 1463 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 PXDNQ92626 1479 aa11.24□□□□□ -0.61
LMO7-226ENST00000534657 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
LMO7-226ENST00000534657 GCP02774 474 aa11.23□□□□□ -0.61
LMO7-226ENST00000534657 ATP10DQ9P241 1426 aa11.23□□□□□ -0.61
LMO7-226ENST00000534657 FOXO3O43524 673 aa11.22□□□□□ -0.61
LMO7-226ENST00000534657 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
LMO7-226ENST00000534657 HOXB7P09629 217 aa11.22□□□□□ -0.61
LMO7-226ENST00000534657 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
LMO7-226ENST00000534657 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
LMO7-226ENST00000534657 TNS3Q68CZ2 1445 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 SOX12O15370 315 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 RGS3P49796 1198 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 NUCB1Q02818 461 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
LMO7-226ENST00000534657 KRT28Q7Z3Y7 464 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
LMO7-226ENST00000534657 CPDO75976 1380 aa11.2□□□□□ -0.62
LMO7-226ENST00000534657 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
LMO7-226ENST00000534657 AMOTQ4VCS5 1084 aa11.2□□□□□ -0.62
LMO7-226ENST00000534657 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
LMO7-226ENST00000534657 NUTM2GQ5VZR2 741 aa11.2□□□□□ -0.62
LMO7-226ENST00000534657 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
LMO7-226ENST00000534657 RGPD5Q99666 1765 aa11.19□□□□□ -0.62
LMO7-226ENST00000534657 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
LMO7-226ENST00000534657 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
LMO7-226ENST00000534657 RBM33Q96EV2 1170 aaKnown RBP11.19□□□□□ -0.62
LMO7-226ENST00000534657 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 IBTKQ9P2D0 1353 aaPredicted RBP11.18□□□□□ -0.62
LMO7-226ENST00000534657 HEG1Q9ULI3 1381 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 POTEB2H3BUK9 544 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 ATF3P18847 181 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 KRT24Q2M2I5 525 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 AKAP4Q5JQC9 854 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 SIRT2Q8IXJ6 389 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 CHMP4AQ9BY43 222 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 MRC1P22897 1456 aa11.18□□□□□ -0.62
LMO7-226ENST00000534657 PARP4Q9UKK3 1724 aaKnown RBP11.18□□□□□ -0.62
LMO7-226ENST00000534657 ERBB3P21860 1342 aa11.17□□□□□ -0.62
LMO7-226ENST00000534657 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
LMO7-226ENST00000534657 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
LMO7-226ENST00000534657 SEC24BO95487 1268 aa11.17□□□□□ -0.62
LMO7-226ENST00000534657 PLEKHO1Q53GL0 409 aaPredicted RBP11.17□□□□□ -0.62
LMO7-226ENST00000534657 RPAP2Q8IXW5 612 aaPredicted RBP11.17□□□□□ -0.62
LMO7-226ENST00000534657 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
LMO7-226ENST00000534657 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
LMO7-226ENST00000534657 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
LMO7-226ENST00000534657 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
LMO7-226ENST00000534657 CCDC30Q5VVM6 783 aa11.16□□□□□ -0.62
LMO7-226ENST00000534657 CHD1LQ86WJ1 897 aa11.16□□□□□ -0.62
LMO7-226ENST00000534657 DCTPP1Q9H773 170 aa11.16□□□□□ -0.62
LMO7-226ENST00000534657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.624e-8■■□□□ 12.6
LMO7-226ENST00000534657 COLQQ9Y215 455 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms