RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 ARID4BQ4LE39 1312 aaPredicted RBP8.44□□□□□ -1.06
ATM-224ENST00000534625 PTPRMP28827 1452 aa8.44□□□□□ -1.06
ATM-224ENST00000534625 UPP2O95045 317 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 PTK2Q05397 1052 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 MEIOBQ8N635 442 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 ADAM32Q8TC27 787 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 ADAMTS8Q9UP79 889 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
ATM-224ENST00000534625 CFAP74Q9C0B2 1584 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 HECW1Q76N89 1606 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 BCORL1Q5H9F3 1711 aa8.43□□□□□ -1.06
ATM-224ENST00000534625 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
ATM-224ENST00000534625 EFCAB2Q5VUJ9 269 aa8.42□□□□□ -1.06
ATM-224ENST00000534625 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
ATM-224ENST00000534625 KCTD15Q96SI1 283 aaPredicted RBP8.42□□□□□ -1.06
ATM-224ENST00000534625 EMILIN1Q9Y6C2 1016 aa8.42□□□□□ -1.06
ATM-224ENST00000534625 TROQ12816 1431 aaPredicted RBP8.42□□□□□ -1.06
ATM-224ENST00000534625 SCAPERQ9BY12 1400 aa8.42□□□□□ -1.06
ATM-224ENST00000534625 YEATS2Q9ULM3 1422 aa8.42□□□□□ -1.06
ATM-224ENST00000534625 ARHGEF40Q8TER5 1519 aa8.42□□□□□ -1.06
ATM-224ENST00000534625 ZMYM4Q5VZL5 1548 aa8.41□□□□□ -1.06
ATM-224ENST00000534625 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
ATM-224ENST00000534625 KIF14Q15058 1648 aa8.4□□□□□ -1.06
ATM-224ENST00000534625 MAGI2Q86UL8 1455 aa8.4□□□□□ -1.06
ATM-224ENST00000534625 POGZQ7Z3K3 1410 aa8.4□□□□□ -1.06
ATM-224ENST00000534625 CASKIN1Q8WXD9 1431 aa8.4□□□□□ -1.06
ATM-224ENST00000534625 INTS6LQ5JSJ4 861 aaKnown RBP8.4□□□□□ -1.06
ATM-224ENST00000534625 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.06
ATM-224ENST00000534625 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.07
ATM-224ENST00000534625 MADDQ8WXG6 1647 aa8.4□□□□□ -1.07
ATM-224ENST00000534625 ZFYVE16Q7Z3T8 1539 aa8.39□□□□□ -1.07
ATM-224ENST00000534625 CBLBQ13191 982 aa8.39□□□□□ -1.07
ATM-224ENST00000534625 SIGLEC1Q9BZZ2 1709 aa8.39□□□□□ -1.07
ATM-224ENST00000534625 MYO5CQ9NQX4 1742 aa8.38□□□□□ -1.07
ATM-224ENST00000534625 Q6ZVU0 165 aa8.38□□□□□ -1.07
ATM-224ENST00000534625 AFAP1Q8N556 730 aa8.38□□□□□ -1.07
ATM-224ENST00000534625 CLIP1P30622 1438 aa8.37□□□□□ -1.07
ATM-224ENST00000534625 GPR37L1O60883 481 aa8.37□□□□□ -1.07
ATM-224ENST00000534625 PTSQ03393 145 aa8.37□□□□□ -1.07
ATM-224ENST00000534625 MLECQ14165 292 aa8.37□□□□□ -1.07
ATM-224ENST00000534625 PNMA1Q8ND90 353 aa8.37□□□□□ -1.07
ATM-224ENST00000534625 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
ATM-224ENST00000534625 ATP10AO60312 1499 aa8.37□□□□□ -1.07
ATM-224ENST00000534625 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
ATM-224ENST00000534625 ARHGAP5Q13017 1502 aa8.36□□□□□ -1.07
ATM-224ENST00000534625 FIGNL2A6NMB9 653 aa8.36□□□□□ -1.07
ATM-224ENST00000534625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.36□□□□□ -1.076e-9■■□□□ 11.4
ATM-224ENST00000534625 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
ATM-224ENST00000534625 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
ATM-224ENST00000534625 RIMS1Q86UR5 1692 aaKnown RBP8.36□□□□□ -1.07
ATM-224ENST00000534625 CDC42BPBQ9Y5S2 1711 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 ZNF518AQ6AHZ1 1483 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 LMTK3Q96Q04 1460 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 TTLL8A6PVC2 850 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 ESPNB1AK53 854 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
ATM-224ENST00000534625 ZNF385CQ66K41 422 aaPredicted RBP8.35□□□□□ -1.07
ATM-224ENST00000534625 TMPRSS4Q9NRS4 437 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 C9orf84Q5VXU9 1444 aa8.35□□□□□ -1.07
ATM-224ENST00000534625 FYCO1Q9BQS8 1478 aa8.34□□□□□ -1.07
ATM-224ENST00000534625 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
ATM-224ENST00000534625 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
ATM-224ENST00000534625 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
ATM-224ENST00000534625 BANK1Q8NDB2 785 aa8.34□□□□□ -1.07
ATM-224ENST00000534625 TRAPPC8Q9Y2L5 1435 aa8.34□□□□□ -1.07
ATM-224ENST00000534625 KDM5CP41229 1560 aa8.34□□□□□ -1.07
ATM-224ENST00000534625 ARHGEF12Q9NZN5 1544 aa8.34□□□□□ -1.08
ATM-224ENST00000534625 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
ATM-224ENST00000534625 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
ATM-224ENST00000534625 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
ATM-224ENST00000534625 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
ATM-224ENST00000534625 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
ATM-224ENST00000534625 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
ATM-224ENST00000534625 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
ATM-224ENST00000534625 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 ERVH48-1M5A8F1 160 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 SPINT1O43278 529 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 LILRA1O75019 489 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 HSPA2P54652 639 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 CCDC155Q8N6L0 562 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
ATM-224ENST00000534625 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 PREX2Q70Z35 1606 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 MLH3Q9UHC1 1453 aa8.32□□□□□ -1.08
ATM-224ENST00000534625 FER1L4A9Z1Z3 1794 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 ABCC1P33527 1531 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 GPATCH8Q9UKJ3 1502 aaKnown RBP8.31□□□□□ -1.08
ATM-224ENST00000534625 SOCS7O14512 581 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 IRS1P35568 1242 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 ADD1P35611 737 aaKnown RBP8.31□□□□□ -1.08
ATM-224ENST00000534625 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
ATM-224ENST00000534625 RAB15P59190 212 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 GPAT2Q6NUI2 795 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms