RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-222ENST00000534581 ATG3Q9NT62 314 aa22.32■■□□□ 1.16
C11orf49-222ENST00000534581 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
C11orf49-222ENST00000534581 NHSQ6T4R5 1651 aa22.32■■□□□ 1.16
C11orf49-222ENST00000534581 PALLDQ8WX93 1383 aa22.31■■□□□ 1.16
C11orf49-222ENST00000534581 PLSCR1O15162 318 aa22.31■■□□□ 1.16
C11orf49-222ENST00000534581 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
C11orf49-222ENST00000534581 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
C11orf49-222ENST00000534581 EZH2Q15910 746 aaKnown RBP22.31■■□□□ 1.16
C11orf49-222ENST00000534581 RBM42Q9BTD8 480 aaKnown RBP22.31■■□□□ 1.16
C11orf49-222ENST00000534581 MIS18AQ9NYP9 233 aa22.3■■□□□ 1.16
C11orf49-222ENST00000534581 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
C11orf49-222ENST00000534581 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
C11orf49-222ENST00000534581 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
C11orf49-222ENST00000534581 WWC1Q8IX03 1113 aa22.28■■□□□ 1.16
C11orf49-222ENST00000534581 NGEFQ8N5V2 710 aa22.28■■□□□ 1.16
C11orf49-222ENST00000534581 CAMKK2Q96RR4 588 aa22.28■■□□□ 1.16
C11orf49-222ENST00000534581 MRC1P22897 1456 aa22.28■■□□□ 1.16
C11orf49-222ENST00000534581 KAT6BQ8WYB5 2073 aa22.27■■□□□ 1.16
C11orf49-222ENST00000534581 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
C11orf49-222ENST00000534581 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.16
C11orf49-222ENST00000534581 TSPYL4Q9UJ04 414 aa22.27■■□□□ 1.16
C11orf49-222ENST00000534581 CCNL1Q9UK58 526 aaPredicted RBP22.27■■□□□ 1.16
C11orf49-222ENST00000534581 ZNF790Q6PG37 636 aa22.26■■□□□ 1.15
C11orf49-222ENST00000534581 SBF2Q86WG5 1849 aa22.25■■□□□ 1.15
C11orf49-222ENST00000534581 LOC102724428A0A0B4J2F2 783 aa22.25■■□□□ 1.15
C11orf49-222ENST00000534581 SIK1P57059 783 aa22.25■■□□□ 1.15
C11orf49-222ENST00000534581 KCNQ3O43525 872 aa22.24■■□□□ 1.15
C11orf49-222ENST00000534581 ATP6V1AP38606 617 aa22.24■■□□□ 1.15
C11orf49-222ENST00000534581 KCNQ4P56696 695 aa22.24■■□□□ 1.15
C11orf49-222ENST00000534581 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
C11orf49-222ENST00000534581 SLC27A3Q5K4L6 730 aa22.24■■□□□ 1.15
C11orf49-222ENST00000534581 SCN11AQ9UI33 1791 aa22.24■■□□□ 1.15
C11orf49-222ENST00000534581 ADAMTS7Q9UKP4 1686 aa22.23■■□□□ 1.15
C11orf49-222ENST00000534581 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
C11orf49-222ENST00000534581 BTAF1O14981 1849 aa22.22■■□□□ 1.15
C11orf49-222ENST00000534581 GNAI1P63096 354 aa22.22■■□□□ 1.15
C11orf49-222ENST00000534581 PROM2Q8N271 834 aa22.22■■□□□ 1.15
C11orf49-222ENST00000534581 FMNL2Q96PY5 1086 aa22.22■■□□□ 1.15
C11orf49-222ENST00000534581 IFT57Q9NWB7 429 aa22.22■■□□□ 1.15
C11orf49-222ENST00000534581 BABAM1Q9NWV8 329 aa22.22■■□□□ 1.15
C11orf49-222ENST00000534581 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
C11orf49-222ENST00000534581 CFAP44Q96MT7 982 aa22.21■■□□□ 1.15
C11orf49-222ENST00000534581 CHL1O00533 1208 aa22.2■■□□□ 1.14
C11orf49-222ENST00000534581 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
C11orf49-222ENST00000534581 LRRC4BQ9NT99 713 aa22.2■■□□□ 1.14
C11orf49-222ENST00000534581 ITGB4P16144 1822 aa22.2■■□□□ 1.14
C11orf49-222ENST00000534581 HMGB2P26583 209 aaKnown RBP22.19■■□□□ 1.14
C11orf49-222ENST00000534581 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
C11orf49-222ENST00000534581 NBPF14Q5TI25 921 aa22.18■■□□□ 1.14
C11orf49-222ENST00000534581 IL16Q14005 1332 aa22.17■■□□□ 1.14
C11orf49-222ENST00000534581 SLC4A9Q96Q91 983 aa22.17■■□□□ 1.14
C11orf49-222ENST00000534581 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
C11orf49-222ENST00000534581 EIF4A1P60842 406 aaKnown RBP22.16■■□□□ 1.14
C11orf49-222ENST00000534581 ITPK1Q13572 414 aa22.16■■□□□ 1.14
C11orf49-222ENST00000534581 VSIG10Q8N0Z9 540 aa22.16■■□□□ 1.14
C11orf49-222ENST00000534581 HEG1Q9ULI3 1381 aa22.15■■□□□ 1.14
C11orf49-222ENST00000534581 SNRPA1P09661 255 aaKnown RBP22.15■■□□□ 1.14
C11orf49-222ENST00000534581 ZNF853P0CG23 659 aa22.15■■□□□ 1.14
C11orf49-222ENST00000534581 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
C11orf49-222ENST00000534581 DNAJC10Q8IXB1 793 aa22.15■■□□□ 1.14
C11orf49-222ENST00000534581 STK32BQ9NY57 414 aa22.15■■□□□ 1.14
C11orf49-222ENST00000534581 LINC00116Q8NCU8 138 aa22.14■■□□□ 1.13
C11orf49-222ENST00000534581 TSR2Q969E8 191 aaKnown RBP22.14■■□□□ 1.13
C11orf49-222ENST00000534581 TEX13AQ9BXU3 409 aaPredicted RBP22.14■■□□□ 1.13
C11orf49-222ENST00000534581 MYH16Q9H6N6 1097 aa22.14■■□□□ 1.13
C11orf49-222ENST00000534581 AK7Q96M32 723 aa22.13■■□□□ 1.13
C11orf49-222ENST00000534581 ZNF521Q96K83 1311 aa22.12■■□□□ 1.13
C11orf49-222ENST00000534581 KCPQ6ZWJ8 1503 aa22.12■■□□□ 1.13
C11orf49-222ENST00000534581 STARD3NLO95772 234 aa22.12■■□□□ 1.13
C11orf49-222ENST00000534581 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
C11orf49-222ENST00000534581 PRAMEF22A3QJZ6 481 aa22.1■■□□□ 1.13
C11orf49-222ENST00000534581 E9PSI1 815 aa22.1■■□□□ 1.13
C11orf49-222ENST00000534581 GIGYF1O75420 1035 aaPredicted RBP22.1■■□□□ 1.13
C11orf49-222ENST00000534581 SPINK5Q9NQ38 1064 aaPredicted RBP22.1■■□□□ 1.13
C11orf49-222ENST00000534581 TFCP2L1Q9NZI6 479 aa22.1■■□□□ 1.13
C11orf49-222ENST00000534581 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
C11orf49-222ENST00000534581 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
C11orf49-222ENST00000534581 ANO8Q9HCE9 1232 aaPredicted RBP22.09■■□□□ 1.13
C11orf49-222ENST00000534581 SIPA1L3O60292 1781 aaPredicted RBP22.09■■□□□ 1.13
C11orf49-222ENST00000534581 ELL2O00472 640 aaPredicted RBP22.08■■□□□ 1.13
C11orf49-222ENST00000534581 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.13
C11orf49-222ENST00000534581 EIF2S2P20042 333 aaKnown RBP22.08■■□□□ 1.13
C11orf49-222ENST00000534581 CRKLP46109 303 aaKnown RBP22.08■■□□□ 1.13
C11orf49-222ENST00000534581 SLC15A2Q16348 729 aa22.08■■□□□ 1.13
C11orf49-222ENST00000534581 ZNF827Q17R98 1081 aa22.08■■□□□ 1.13
C11orf49-222ENST00000534581 USP16Q9Y5T5 823 aa22.08■■□□□ 1.13
C11orf49-222ENST00000534581 PAPPAQ13219 1627 aa22.08■■□□□ 1.13
C11orf49-222ENST00000534581 VIRMAQ69YN4 1812 aaKnown RBP22.08■■□□□ 1.12
C11orf49-222ENST00000534581 RGPD3A6NKT7 1758 aaPredicted RBP22.07■■□□□ 1.12
C11orf49-222ENST00000534581 RGPD4Q7Z3J3 1758 aa22.07■■□□□ 1.12
C11orf49-222ENST00000534581 GNPATO15228 680 aa22.07■■□□□ 1.12
C11orf49-222ENST00000534581 DUSP27Q5VZP5 1158 aa22.07■■□□□ 1.12
C11orf49-222ENST00000534581 AKT1S1Q96B36 256 aa22.07■■□□□ 1.12
C11orf49-222ENST00000534581 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
C11orf49-222ENST00000534581 CCDC87Q9NVE4 849 aa22.07■■□□□ 1.12
C11orf49-222ENST00000534581 R3HDM1Q15032 1099 aaKnown RBP22.06■■□□□ 1.12
C11orf49-222ENST00000534581 RC3H1Q5TC82 1133 aaKnown RBP22.06■■□□□ 1.12
C11orf49-222ENST00000534581 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
C11orf49-222ENST00000534581 CNTNAP4Q9C0A0 1308 aa22.06■■□□□ 1.12
C11orf49-222ENST00000534581 PHF14O94880 888 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms