RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
FOXRED1-218ENST00000534315 DCCP43146 1447 aa17.03■□□□□ 0.32
FOXRED1-218ENST00000534315 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
FOXRED1-218ENST00000534315 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.32
FOXRED1-218ENST00000534315 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-218ENST00000534315 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
FOXRED1-218ENST00000534315 HSPA2P54652 639 aa17.01■□□□□ 0.31
FOXRED1-218ENST00000534315 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-218ENST00000534315 TEFQ10587 303 aa17■□□□□ 0.31
FOXRED1-218ENST00000534315 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
FOXRED1-218ENST00000534315 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
FOXRED1-218ENST00000534315 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
FOXRED1-218ENST00000534315 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
FOXRED1-218ENST00000534315 KCNQ3O43525 872 aa16.99■□□□□ 0.31
FOXRED1-218ENST00000534315 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
FOXRED1-218ENST00000534315 ERBB3P21860 1342 aa16.99■□□□□ 0.31
FOXRED1-218ENST00000534315 RNMTO43148 476 aaKnown RBP16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 HMMRO75330 724 aa16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 GNAI2P04899 355 aa16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
FOXRED1-218ENST00000534315 APBB1O00213 710 aa16.97■□□□□ 0.31
FOXRED1-218ENST00000534315 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
FOXRED1-218ENST00000534315 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
FOXRED1-218ENST00000534315 CADPS2Q86UW7 1296 aa16.97■□□□□ 0.31
FOXRED1-218ENST00000534315 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
FOXRED1-218ENST00000534315 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.31
FOXRED1-218ENST00000534315 HOXB7P09629 217 aa16.96■□□□□ 0.31
FOXRED1-218ENST00000534315 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
FOXRED1-218ENST00000534315 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
FOXRED1-218ENST00000534315 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.31
FOXRED1-218ENST00000534315 GNAI3P08754 354 aa16.96■□□□□ 0.3
FOXRED1-218ENST00000534315 NFKBIBQ15653 356 aa16.96■□□□□ 0.3
FOXRED1-218ENST00000534315 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.3
FOXRED1-218ENST00000534315 CHPF2Q9P2E5 772 aa16.95■□□□□ 0.3
FOXRED1-218ENST00000534315 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
FOXRED1-218ENST00000534315 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
FOXRED1-218ENST00000534315 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
FOXRED1-218ENST00000534315 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
FOXRED1-218ENST00000534315 COL18A1P39060 1754 aa16.94■□□□□ 0.3
FOXRED1-218ENST00000534315 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
FOXRED1-218ENST00000534315 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
FOXRED1-218ENST00000534315 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
FOXRED1-218ENST00000534315 CDC45O75419 566 aa16.93■□□□□ 0.3
FOXRED1-218ENST00000534315 SLKQ9H2G2 1235 aaPredicted RBP16.93■□□□□ 0.3
FOXRED1-218ENST00000534315 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
FOXRED1-218ENST00000534315 CRYBG1Q9Y4K1 1723 aa16.92■□□□□ 0.3
FOXRED1-218ENST00000534315 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
FOXRED1-218ENST00000534315 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
FOXRED1-218ENST00000534315 LMTK3Q96Q04 1460 aa16.92■□□□□ 0.3
FOXRED1-218ENST00000534315 PNMA6EA0A0J9YXQ4 647 aa16.92■□□□□ 0.3
FOXRED1-218ENST00000534315 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
FOXRED1-218ENST00000534315 ANXA1P04083 346 aa16.91■□□□□ 0.3
FOXRED1-218ENST00000534315 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
FOXRED1-218ENST00000534315 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
FOXRED1-218ENST00000534315 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
FOXRED1-218ENST00000534315 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
FOXRED1-218ENST00000534315 SPATA31A3Q5VYP0 1347 aa16.9■□□□□ 0.3
FOXRED1-218ENST00000534315 UBTFL1P0CB47 393 aaPredicted RBP16.9■□□□□ 0.3
FOXRED1-218ENST00000534315 CHRNA2Q15822 529 aa16.9■□□□□ 0.3
FOXRED1-218ENST00000534315 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
FOXRED1-218ENST00000534315 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
FOXRED1-218ENST00000534315 MEGF6O75095 1541 aa16.89■□□□□ 0.29
FOXRED1-218ENST00000534315 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
FOXRED1-218ENST00000534315 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.29
FOXRED1-218ENST00000534315 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 ADCY9O60503 1353 aa16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 DBF4Q9UBU7 674 aaPredicted RBP16.88■□□□□ 0.29
FOXRED1-218ENST00000534315 ABCC6O95255 1503 aa16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 STRCQ7RTU9 1775 aa16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 PRAMEF22A3QJZ6 481 aa16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 SDSP20132 328 aa16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
FOXRED1-218ENST00000534315 BEND3Q5T5X7 828 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 KIF2CQ99661 725 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 PHKG2P15735 406 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 PDE1AP54750 535 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 LRRCC1Q9C099 1032 aa16.86■□□□□ 0.29
FOXRED1-218ENST00000534315 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
FOXRED1-218ENST00000534315 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
FOXRED1-218ENST00000534315 CPDO75976 1380 aa16.84■□□□□ 0.29
FOXRED1-218ENST00000534315 NBPF7P0C2Y1 421 aaPredicted RBP16.84■□□□□ 0.29
FOXRED1-218ENST00000534315 SSH3Q8TE77 659 aa16.84■□□□□ 0.29
FOXRED1-218ENST00000534315 SLC52A2Q9HAB3 445 aa16.84■□□□□ 0.29
FOXRED1-218ENST00000534315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
FOXRED1-218ENST00000534315 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms