RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 A0A1W2PRU2 124 aa6.1□□□□□ -1.43
CSMD3-210ENST00000534172 DKK1O94907 266 aa6.1□□□□□ -1.43
CSMD3-210ENST00000534172 CBLBQ13191 982 aa6.1□□□□□ -1.43
CSMD3-210ENST00000534172 CDK2AP1O14519 115 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 SPINT1O43278 529 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 RNF144AP50876 292 aaPredicted RBP6.09□□□□□ -1.43
CSMD3-210ENST00000534172 SCNN1DP51172 638 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 SMTNP53814 917 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 MRPL14Q6P1L8 145 aaKnown RBP6.09□□□□□ -1.43
CSMD3-210ENST00000534172 LINC00528Q8N1L1 170 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 TMEM229AB2RXF0 380 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 TMEM164Q5U3C3 297 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 ETNK1Q9HBU6 452 aa6.09□□□□□ -1.43
CSMD3-210ENST00000534172 BRD1O95696 1058 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 MTFR1Q15390 333 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
CSMD3-210ENST00000534172 CNKSR1Q969H4 720 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 KIFC2Q96AC6 838 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 HINFPQ9BQA5 517 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 SENP2Q9HC62 589 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 ARHGEF10LQ9HCE6 1279 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 KIAA1024Q9UPX6 916 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 SFI1A8K8P3 1242 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 MEN1O00255 615 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 BMP2P12643 396 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 RELBQ01201 579 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 C1orf216Q8TAB5 229 aa6.08□□□□□ -1.44
CSMD3-210ENST00000534172 ZBTB7CA1YPR0 619 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 A6NJY4 79 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 TMEM88BA6NKF7 163 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 IGFBP4P22692 258 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 KCNA1Q09470 495 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 TLR1Q15399 786 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 HRH3Q9Y5N1 445 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 FOXO3O43524 673 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 IL2RAP01589 272 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 CENPCQ03188 943 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 WDR44Q5JSH3 913 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 STK32AQ8WU08 396 aa6.07□□□□□ -1.44
CSMD3-210ENST00000534172 ZSCAN10Q96SZ4 725 aaPredicted RBP6.07□□□□□ -1.44
CSMD3-210ENST00000534172 SLC27A3Q5K4L6 730 aa6.06□□□□□ -1.44
CSMD3-210ENST00000534172 COL26A1Q96A83 441 aa6.06□□□□□ -1.44
CSMD3-210ENST00000534172 AGBL1Q96MI9 1066 aa6.06□□□□□ -1.44
CSMD3-210ENST00000534172 POLMQ9NP87 494 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-210ENST00000534172 SERTAD1Q9UHV2 236 aa6.06□□□□□ -1.44
CSMD3-210ENST00000534172 PTCD1O75127 700 aaKnown RBP6.06□□□□□ -1.44
CSMD3-210ENST00000534172 TMEM214Q6NUQ4 689 aaKnown RBP6.06□□□□□ -1.44
CSMD3-210ENST00000534172 SPATA31C2B4DYI2 1134 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 PPARGC1BQ86YN6 1023 aaKnown RBP6.05□□□□□ -1.44
CSMD3-210ENST00000534172 KDF1Q8NAX2 398 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-210ENST00000534172 VTI1AQ96AJ9 217 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 GRIP2Q9C0E4 1043 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 SCHIP1Q9P0W5 487 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-210ENST00000534172 ATP2B4P23634 1241 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 WEE1P30291 646 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 PSMA6P60900 246 aaKnown RBP6.05□□□□□ -1.44
CSMD3-210ENST00000534172 FOXK2Q01167 660 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 FAM69CQ0P6D2 419 aa6.05□□□□□ -1.44
CSMD3-210ENST00000534172 NIFKQ9BYG3 293 aaKnown RBP6.05□□□□□ -1.44
CSMD3-210ENST00000534172 ZNF395Q9H8N7 513 aaPredicted RBP6.05□□□□□ -1.44
CSMD3-210ENST00000534172 TEAD4Q15561 434 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 RHBDD1Q8TEB9 315 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 FHDC1Q9C0D6 1143 aaPredicted RBP6.04□□□□□ -1.44
CSMD3-210ENST00000534172 AAASQ9NRG9 546 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 RAB6BQ9NRW1 208 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 ATAD2Q6PL18 1390 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 TTLL8A6PVC2 850 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 EPHA4P54764 986 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 LYSMD3Q7Z3D4 306 aa6.04□□□□□ -1.44
CSMD3-210ENST00000534172 GPC6Q9Y625 555 aaPredicted RBP6.04□□□□□ -1.44
CSMD3-210ENST00000534172 ARID4AP29374 1257 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 TSEN2Q8NCE0 465 aaKnown RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 ATP13A2Q9NQ11 1180 aa6.03□□□□□ -1.44
CSMD3-210ENST00000534172 CXXC1Q9P0U4 656 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 SOS2Q07890 1332 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 SSFA2P28290 1259 aa6.03□□□□□ -1.44
CSMD3-210ENST00000534172 HIRAP54198 1017 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 HIF1AQ16665 826 aa6.03□□□□□ -1.44
CSMD3-210ENST00000534172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 C6orf118Q5T5N4 469 aa6.03□□□□□ -1.44
CSMD3-210ENST00000534172 SLC9A9Q8IVB4 645 aa6.03□□□□□ -1.44
CSMD3-210ENST00000534172 TNS4Q8IZW8 715 aa6.03□□□□□ -1.44
CSMD3-210ENST00000534172 CCER1Q8TC90 406 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 PURBQ96QR8 312 aaKnown RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 INSM2Q96T92 566 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 CCDC9Q9Y3X0 531 aaKnown RBP6.03□□□□□ -1.44
CSMD3-210ENST00000534172 TAS1R3Q7RTX0 852 aa6.02□□□□□ -1.45
CSMD3-210ENST00000534172 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
CSMD3-210ENST00000534172 SERTM1A2A2V5 107 aa6.02□□□□□ -1.45
CSMD3-210ENST00000534172 PPP1R12BO60237 982 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-210ENST00000534172 C1orf53Q5VUE5 145 aa6.02□□□□□ -1.45
CSMD3-210ENST00000534172 TRIM46Q7Z4K8 759 aa6.02□□□□□ -1.45
CSMD3-210ENST00000534172 NBPF1Q3BBV0 1214 aa6.01□□□□□ -1.45
CSMD3-210ENST00000534172 CABP1Q9NZU7 370 aa6.01□□□□□ -1.45
CSMD3-210ENST00000534172 FOXD4L5Q5VV16 416 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-210ENST00000534172 POTEAQ6S8J7 498 aa6.01□□□□□ -1.45
CSMD3-210ENST00000534172 Q6ZNB5 142 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms