RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
SOX9-AS1-213ENST00000533996 MEGF6O75095 1541 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 AMPHP49418 695 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 NUBP1P53384 320 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 TMC1Q8TDI8 760 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 ITGB4P16144 1822 aa13.18□□□□□ -0.3
SOX9-AS1-213ENST00000533996 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
SOX9-AS1-213ENST00000533996 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
SOX9-AS1-213ENST00000533996 SLC12A5Q9H2X9 1139 aa13.17□□□□□ -0.3
SOX9-AS1-213ENST00000533996 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
SOX9-AS1-213ENST00000533996 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
SOX9-AS1-213ENST00000533996 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
SOX9-AS1-213ENST00000533996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
SOX9-AS1-213ENST00000533996 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
SOX9-AS1-213ENST00000533996 COG3Q96JB2 828 aa13.16□□□□□ -0.3
SOX9-AS1-213ENST00000533996 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 RTL1A6NKG5 1358 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
SOX9-AS1-213ENST00000533996 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
SOX9-AS1-213ENST00000533996 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
SOX9-AS1-213ENST00000533996 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
SOX9-AS1-213ENST00000533996 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
SOX9-AS1-213ENST00000533996 PXDNLA1KZ92 1463 aa13.14□□□□□ -0.31
SOX9-AS1-213ENST00000533996 PHF14O94880 888 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 C10orf71Q711Q0 1435 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
SOX9-AS1-213ENST00000533996 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
SOX9-AS1-213ENST00000533996 RGL2O15211 777 aa13.11□□□□□ -0.31
SOX9-AS1-213ENST00000533996 MMP10P09238 476 aa13.11□□□□□ -0.31
SOX9-AS1-213ENST00000533996 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
SOX9-AS1-213ENST00000533996 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
SOX9-AS1-213ENST00000533996 TNRC6CQ9HCJ0 1690 aaKnown RBP13.1□□□□□ -0.31
SOX9-AS1-213ENST00000533996 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
SOX9-AS1-213ENST00000533996 SIK1P57059 783 aa13.1□□□□□ -0.31
SOX9-AS1-213ENST00000533996 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
SOX9-AS1-213ENST00000533996 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
SOX9-AS1-213ENST00000533996 PCNTO95613 3336 aa13.1□□□□□ -0.31
SOX9-AS1-213ENST00000533996 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 CYP27B1O15528 508 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 FCHSD2O94868 740 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 HTRA3P83110 453 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 PIGBQ92521 554 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
SOX9-AS1-213ENST00000533996 KIF24Q5T7B8 1368 aa13.08□□□□□ -0.31
SOX9-AS1-213ENST00000533996 GNPATO15228 680 aa13.08□□□□□ -0.32
SOX9-AS1-213ENST00000533996 FBLN1P23142 703 aa13.08□□□□□ -0.32
SOX9-AS1-213ENST00000533996 TMF1P82094 1093 aa13.08□□□□□ -0.32
SOX9-AS1-213ENST00000533996 C9orf131Q5VYM1 1079 aa13.08□□□□□ -0.32
SOX9-AS1-213ENST00000533996 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
SOX9-AS1-213ENST00000533996 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.32
SOX9-AS1-213ENST00000533996 INSRP06213 1382 aa13.07□□□□□ -0.32
SOX9-AS1-213ENST00000533996 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
SOX9-AS1-213ENST00000533996 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
SOX9-AS1-213ENST00000533996 ZNF831Q5JPB2 1677 aa13.07□□□□□ -0.32
SOX9-AS1-213ENST00000533996 SBF1O95248 1867 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 C4AP0C0L4 1744 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 DPEP1P16444 411 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
SOX9-AS1-213ENST00000533996 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 KCNA3P22001 575 aa13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 ITPK1Q13572 414 aa13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
SOX9-AS1-213ENST00000533996 HSPA1AP0DMV8 641 aaKnown RBP13.04□□□□□ -0.32
SOX9-AS1-213ENST00000533996 HSPA1BP0DMV9 641 aaKnown RBP13.04□□□□□ -0.32
SOX9-AS1-213ENST00000533996 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
SOX9-AS1-213ENST00000533996 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
SOX9-AS1-213ENST00000533996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
SOX9-AS1-213ENST00000533996 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
SOX9-AS1-213ENST00000533996 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
SOX9-AS1-213ENST00000533996 HSP90AB2PQ58FF8 381 aa13.03□□□□□ -0.32
SOX9-AS1-213ENST00000533996 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
SOX9-AS1-213ENST00000533996 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
SOX9-AS1-213ENST00000533996 ASAP1Q9ULH1 1129 aa13.03□□□□□ -0.32
SOX9-AS1-213ENST00000533996 FLT4P35916 1363 aa13.03□□□□□ -0.32
SOX9-AS1-213ENST00000533996 FYB1O15117 783 aa13.02□□□□□ -0.33
SOX9-AS1-213ENST00000533996 GYS1P13807 737 aa13.02□□□□□ -0.33
SOX9-AS1-213ENST00000533996 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
SOX9-AS1-213ENST00000533996 DALRD3Q5D0E6 543 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms