RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 ACSBG1Q96GR2 724 aa28.65■■■□□ 2.18
VPS51-212ENST00000533656 TOGARAM1Q9Y4F4 1720 aa28.64■■■□□ 2.18
VPS51-212ENST00000533656 PRIM1P49642 420 aaKnown RBP28.64■■■□□ 2.18
VPS51-212ENST00000533656 TMOD3Q9NYL9 352 aa28.64■■■□□ 2.18
VPS51-212ENST00000533656 SCN11AQ9UI33 1791 aa28.63■■■□□ 2.17
VPS51-212ENST00000533656 CABP4P57796 275 aa28.63■■■□□ 2.17
VPS51-212ENST00000533656 IL17REQ8NFR9 667 aa28.63■■■□□ 2.17
VPS51-212ENST00000533656 SYTL4Q96C24 671 aaPredicted RBP28.63■■■□□ 2.17
VPS51-212ENST00000533656 LGR6Q9HBX8 967 aa28.63■■■□□ 2.17
VPS51-212ENST00000533656 RRP7AQ9Y3A4 280 aaKnown RBP28.63■■■□□ 2.17
VPS51-212ENST00000533656 CCDC27Q2M243 656 aa28.62■■■□□ 2.17
VPS51-212ENST00000533656 SLC52A2Q9HAB3 445 aa28.62■■■□□ 2.17
VPS51-212ENST00000533656 TEFQ10587 303 aa28.61■■■□□ 2.17
VPS51-212ENST00000533656 NEUROD2Q15784 382 aa28.61■■■□□ 2.17
VPS51-212ENST00000533656 PAPPAQ13219 1627 aa28.61■■■□□ 2.17
VPS51-212ENST00000533656 PDGFDQ9GZP0 370 aaPredicted RBP28.6■■■□□ 2.17
VPS51-212ENST00000533656 DLG5Q8TDM6 1919 aa28.59■■■□□ 2.17
VPS51-212ENST00000533656 TXNRD1Q16881 649 aa28.59■■■□□ 2.17
VPS51-212ENST00000533656 MCM10Q7L590 875 aa28.59■■■□□ 2.17
VPS51-212ENST00000533656 TRIM35Q9UPQ4 493 aa28.58■■■□□ 2.17
VPS51-212ENST00000533656 CALD1Q05682 793 aaKnown RBP28.57■■■□□ 2.16
VPS51-212ENST00000533656 PIGBQ92521 554 aa28.57■■■□□ 2.16
VPS51-212ENST00000533656 DCTN1Q14203 1278 aa28.56■■■□□ 2.16
VPS51-212ENST00000533656 NFATC2IPQ8NCF5 419 aa28.56■■■□□ 2.16
VPS51-212ENST00000533656 SMARCC1Q92922 1105 aaPredicted RBP28.55■■■□□ 2.16
VPS51-212ENST00000533656 ITGB4P16144 1822 aa28.54■■■□□ 2.16
VPS51-212ENST00000533656 SPON1Q9HCB6 807 aa28.53■■■□□ 2.16
VPS51-212ENST00000533656 TAF7Q15545 349 aaPredicted RBP28.52■■■□□ 2.16
VPS51-212ENST00000533656 BABAM1Q9NWV8 329 aa28.52■■■□□ 2.16
VPS51-212ENST00000533656 VIRMAQ69YN4 1812 aaKnown RBP28.52■■■□□ 2.16
VPS51-212ENST00000533656 WWC1Q8IX03 1113 aa28.5■■■□□ 2.15
VPS51-212ENST00000533656 TUBGCP6Q96RT7 1819 aa28.49■■■□□ 2.15
VPS51-212ENST00000533656 THUMPD2Q9BTF0 503 aaKnown RBP28.49■■■□□ 2.15
VPS51-212ENST00000533656 STK32BQ9NY57 414 aa28.49■■■□□ 2.15
VPS51-212ENST00000533656 SIPA1L3O60292 1781 aaPredicted RBP28.49■■■□□ 2.15
VPS51-212ENST00000533656 BTBD11A6QL63 1104 aa28.48■■■□□ 2.15
VPS51-212ENST00000533656 ZBTB7AO95365 584 aa28.48■■■□□ 2.15
VPS51-212ENST00000533656 SLC15A2Q16348 729 aa28.48■■■□□ 2.15
VPS51-212ENST00000533656 LY75O60449 1722 aa28.47■■■□□ 2.15
VPS51-212ENST00000533656 WDR63Q8IWG1 891 aa28.47■■■□□ 2.15
VPS51-212ENST00000533656 ATG3Q9NT62 314 aa28.47■■■□□ 2.15
VPS51-212ENST00000533656 PALLDQ8WX93 1383 aa28.47■■■□□ 2.15
VPS51-212ENST00000533656 IL16Q14005 1332 aa28.46■■■□□ 2.15
VPS51-212ENST00000533656 HMGB2P26583 209 aaKnown RBP28.46■■■□□ 2.15
VPS51-212ENST00000533656 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
VPS51-212ENST00000533656 PPP1R1BQ9UD71 204 aaPredicted RBP28.46■■■□□ 2.15
VPS51-212ENST00000533656 ASAP1Q9ULH1 1129 aa28.46■■■□□ 2.15
VPS51-212ENST00000533656 ZNF790Q6PG37 636 aa28.44■■■□□ 2.14
VPS51-212ENST00000533656 CFAP44Q96MT7 982 aa28.44■■■□□ 2.14
VPS51-212ENST00000533656 LRRC4BQ9NT99 713 aa28.44■■■□□ 2.14
VPS51-212ENST00000533656 IFT57Q9NWB7 429 aa28.44■■■□□ 2.14
VPS51-212ENST00000533656 SALL2Q9Y467 1007 aaPredicted RBP28.44■■■□□ 2.14
VPS51-212ENST00000533656 QSER1Q2KHR3 1735 aa28.43■■■□□ 2.14
VPS51-212ENST00000533656 GNAI1P63096 354 aa28.43■■■□□ 2.14
VPS51-212ENST00000533656 ZNF521Q96K83 1311 aa28.43■■■□□ 2.14
VPS51-212ENST00000533656 ZNF827Q17R98 1081 aa28.42■■■□□ 2.14
VPS51-212ENST00000533656 SLC27A3Q5K4L6 730 aa28.42■■■□□ 2.14
VPS51-212ENST00000533656 PTGER2P43116 358 aa28.41■■■□□ 2.14
VPS51-212ENST00000533656 HNRNPUQ00839 825 aaKnown RBP eCLIP28.41■■■□□ 2.14
VPS51-212ENST00000533656 TSPYL4Q9UJ04 414 aa28.41■■■□□ 2.14
VPS51-212ENST00000533656 ATF5Q9Y2D1 282 aaPredicted RBP28.41■■■□□ 2.14
VPS51-212ENST00000533656 SENP3-EIF4A1A0A087X0R7 540 aa28.4■■■□□ 2.14
VPS51-212ENST00000533656 CHL1O00533 1208 aa28.4■■■□□ 2.14
VPS51-212ENST00000533656 ZNF853P0CG23 659 aa28.39■■■□□ 2.14
VPS51-212ENST00000533656 SLC39A6Q13433 755 aa28.39■■■□□ 2.14
VPS51-212ENST00000533656 LOC102724428A0A0B4J2F2 783 aa28.38■■■□□ 2.13
VPS51-212ENST00000533656 SIK1P57059 783 aa28.38■■■□□ 2.13
VPS51-212ENST00000533656 FMNL2Q96PY5 1086 aa28.38■■■□□ 2.13
VPS51-212ENST00000533656 KCPQ6ZWJ8 1503 aa28.38■■■□□ 2.13
VPS51-212ENST00000533656 KCNQ4P56696 695 aa28.37■■■□□ 2.13
VPS51-212ENST00000533656 VSIG10Q8N0Z9 540 aa28.37■■■□□ 2.13
VPS51-212ENST00000533656 KDM3BQ7LBC6 1761 aa28.37■■■□□ 2.13
VPS51-212ENST00000533656 ZNF831Q5JPB2 1677 aa28.36■■■□□ 2.13
VPS51-212ENST00000533656 CCNL1Q9UK58 526 aaPredicted RBP28.36■■■□□ 2.13
VPS51-212ENST00000533656 LAS1LQ9Y4W2 734 aaKnown RBP28.36■■■□□ 2.13
VPS51-212ENST00000533656 UBR2Q8IWV8 1755 aa28.36■■■□□ 2.13
VPS51-212ENST00000533656 RBM42Q9BTD8 480 aaKnown RBP28.35■■■□□ 2.13
VPS51-212ENST00000533656 MIS18AQ9NYP9 233 aa28.35■■■□□ 2.13
VPS51-212ENST00000533656 PTCD1O75127 700 aaKnown RBP28.34■■■□□ 2.13
VPS51-212ENST00000533656 GOLGA2Q08379 1002 aa28.34■■■□□ 2.13
VPS51-212ENST00000533656 HEG1Q9ULI3 1381 aa28.34■■■□□ 2.13
VPS51-212ENST00000533656 AKT1S1Q96B36 256 aa28.33■■■□□ 2.13
VPS51-212ENST00000533656 ZNF496Q96IT1 587 aaPredicted RBP28.33■■■□□ 2.13
VPS51-212ENST00000533656 ZBED9Q6R2W3 1325 aa28.33■■■□□ 2.13
VPS51-212ENST00000533656 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
VPS51-212ENST00000533656 COL24A1Q17RW2 1714 aa28.32■■■□□ 2.12
VPS51-212ENST00000533656 KCNQ3O43525 872 aa28.32■■■□□ 2.12
VPS51-212ENST00000533656 EIF4A1P60842 406 aaKnown RBP28.32■■■□□ 2.12
VPS51-212ENST00000533656 SGIP1Q9BQI5 828 aa28.32■■■□□ 2.12
VPS51-212ENST00000533656 MTFR1LQ9H019 292 aa28.32■■■□□ 2.12
VPS51-212ENST00000533656 MYH16Q9H6N6 1097 aa28.32■■■□□ 2.12
VPS51-212ENST00000533656 MBIPQ9NS73 344 aa28.32■■■□□ 2.12
VPS51-212ENST00000533656 E9PSI1 815 aa28.31■■■□□ 2.12
VPS51-212ENST00000533656 ATP6V1AP38606 617 aa28.31■■■□□ 2.12
VPS51-212ENST00000533656 TEX13AQ9BXU3 409 aaPredicted RBP28.31■■■□□ 2.12
VPS51-212ENST00000533656 TAF1LQ8IZX4 1826 aa28.29■■■□□ 2.12
VPS51-212ENST00000533656 C5P01031 1676 aa28.29■■■□□ 2.12
VPS51-212ENST00000533656 SNRPA1P09661 255 aaKnown RBP28.29■■■□□ 2.12
VPS51-212ENST00000533656 SLC4A9Q96Q91 983 aa28.29■■■□□ 2.12
VPS51-212ENST00000533656 UTRNP46939 3433 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms