RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 BTBD11A6QL63 1104 aa22.82■■□□□ 1.24
NXF1-216ENST00000533499 TAF7Q15545 349 aaPredicted RBP22.82■■□□□ 1.24
NXF1-216ENST00000533499 ADAMTS7Q9UKP4 1686 aa22.81■■□□□ 1.24
NXF1-216ENST00000533499 SLC39A6Q13433 755 aa22.81■■□□□ 1.24
NXF1-216ENST00000533499 WWC1Q8IX03 1113 aa22.81■■□□□ 1.24
NXF1-216ENST00000533499 UPF1Q92900 1129 aaKnown RBP eCLIP22.81■■□□□ 1.24
NXF1-216ENST00000533499 YTHDC1Q96MU7 727 aaKnown RBP22.81■■□□□ 1.24
NXF1-216ENST00000533499 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
NXF1-216ENST00000533499 BAG6P46379 1132 aa22.8■■□□□ 1.24
NXF1-216ENST00000533499 CALD1Q05682 793 aaKnown RBP22.8■■□□□ 1.24
NXF1-216ENST00000533499 TTC5Q8N0Z6 440 aa22.8■■□□□ 1.24
NXF1-216ENST00000533499 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
NXF1-216ENST00000533499 TNS1Q9HBL0 1735 aaKnown RBP22.79■■□□□ 1.24
NXF1-216ENST00000533499 MRC1P22897 1456 aa22.79■■□□□ 1.24
NXF1-216ENST00000533499 PTCD1O75127 700 aaKnown RBP22.78■■□□□ 1.24
NXF1-216ENST00000533499 EN1Q05925 392 aaPredicted RBP22.78■■□□□ 1.24
NXF1-216ENST00000533499 CCDC27Q2M243 656 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 DEFB132Q7Z7B7 95 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 CCDC125Q86Z20 511 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 NGEFQ8N5V2 710 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 SMARCC1Q92922 1105 aaPredicted RBP22.78■■□□□ 1.24
NXF1-216ENST00000533499 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 EP400Q96L91 3159 aa22.78■■□□□ 1.24
NXF1-216ENST00000533499 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
NXF1-216ENST00000533499 SIPA1L3O60292 1781 aaPredicted RBP22.76■■□□□ 1.23
NXF1-216ENST00000533499 KCNQ3O43525 872 aa22.75■■□□□ 1.23
NXF1-216ENST00000533499 GNAI1P63096 354 aa22.74■■□□□ 1.23
NXF1-216ENST00000533499 KCNQ4P56696 695 aa22.73■■□□□ 1.23
NXF1-216ENST00000533499 NCBP3Q53F19 620 aaKnown RBP22.73■■□□□ 1.23
NXF1-216ENST00000533499 ZNF790Q6PG37 636 aa22.73■■□□□ 1.23
NXF1-216ENST00000533499 WDR63Q8IWG1 891 aa22.73■■□□□ 1.23
NXF1-216ENST00000533499 EZH2Q15910 746 aaKnown RBP22.72■■□□□ 1.23
NXF1-216ENST00000533499 CCNL1Q9UK58 526 aaPredicted RBP22.72■■□□□ 1.23
NXF1-216ENST00000533499 CFAP44Q96MT7 982 aa22.71■■□□□ 1.23
NXF1-216ENST00000533499 IFT57Q9NWB7 429 aa22.71■■□□□ 1.23
NXF1-216ENST00000533499 LOC102724428A0A0B4J2F2 783 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 PLSCR1O15162 318 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 SIK1P57059 783 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 TXNRD1Q16881 649 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 TSR2Q969E8 191 aaKnown RBP22.7■■□□□ 1.22
NXF1-216ENST00000533499 FMNL2Q96PY5 1086 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 MBIPQ9NS73 344 aa22.7■■□□□ 1.22
NXF1-216ENST00000533499 CHL1O00533 1208 aa22.69■■□□□ 1.22
NXF1-216ENST00000533499 GOLGA2Q08379 1002 aa22.69■■□□□ 1.22
NXF1-216ENST00000533499 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
NXF1-216ENST00000533499 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
NXF1-216ENST00000533499 IL16Q14005 1332 aa22.67■■□□□ 1.22
NXF1-216ENST00000533499 CAMKK2Q96RR4 588 aa22.67■■□□□ 1.22
NXF1-216ENST00000533499 BABAM1Q9NWV8 329 aa22.67■■□□□ 1.22
NXF1-216ENST00000533499 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
NXF1-216ENST00000533499 CDCA7LQ96GN5 454 aa22.66■■□□□ 1.22
NXF1-216ENST00000533499 MYH16Q9H6N6 1097 aa22.66■■□□□ 1.22
NXF1-216ENST00000533499 ZNF521Q96K83 1311 aa22.65■■□□□ 1.22
NXF1-216ENST00000533499 SOCS7O14512 581 aa22.65■■□□□ 1.22
NXF1-216ENST00000533499 ZNF853P0CG23 659 aa22.65■■□□□ 1.22
NXF1-216ENST00000533499 EIF4A1P60842 406 aaKnown RBP22.65■■□□□ 1.22
NXF1-216ENST00000533499 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
NXF1-216ENST00000533499 LY75O60449 1722 aa22.65■■□□□ 1.22
NXF1-216ENST00000533499 KCPQ6ZWJ8 1503 aa22.64■■□□□ 1.21
NXF1-216ENST00000533499 SLC27A3Q5K4L6 730 aa22.64■■□□□ 1.21
NXF1-216ENST00000533499 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
NXF1-216ENST00000533499 PROM2Q8N271 834 aa22.64■■□□□ 1.21
NXF1-216ENST00000533499 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
NXF1-216ENST00000533499 HEG1Q9ULI3 1381 aa22.63■■□□□ 1.21
NXF1-216ENST00000533499 ZBED9Q6R2W3 1325 aa22.63■■□□□ 1.21
NXF1-216ENST00000533499 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
NXF1-216ENST00000533499 ITPK1Q13572 414 aa22.63■■□□□ 1.21
NXF1-216ENST00000533499 KRT24Q2M2I5 525 aa22.63■■□□□ 1.21
NXF1-216ENST00000533499 LRRC4BQ9NT99 713 aa22.63■■□□□ 1.21
NXF1-216ENST00000533499 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
NXF1-216ENST00000533499 FANCIQ9NVI1 1328 aa22.62■■□□□ 1.21
NXF1-216ENST00000533499 E9PSI1 815 aa22.62■■□□□ 1.21
NXF1-216ENST00000533499 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
NXF1-216ENST00000533499 PRAMEF22A3QJZ6 481 aa22.61■■□□□ 1.21
NXF1-216ENST00000533499 RGPD3A6NKT7 1758 aaPredicted RBP22.61■■□□□ 1.21
NXF1-216ENST00000533499 RGPD4Q7Z3J3 1758 aa22.61■■□□□ 1.21
NXF1-216ENST00000533499 SLFN5Q08AF3 891 aa22.6■■□□□ 1.21
NXF1-216ENST00000533499 EIF2S2P20042 333 aaKnown RBP22.59■■□□□ 1.21
NXF1-216ENST00000533499 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
NXF1-216ENST00000533499 LINC00116Q8NCU8 138 aa22.59■■□□□ 1.21
NXF1-216ENST00000533499 NECTIN2Q92692 538 aa22.59■■□□□ 1.21
NXF1-216ENST00000533499 GIGYF1O75420 1035 aaPredicted RBP22.58■■□□□ 1.21
NXF1-216ENST00000533499 STARD3NLO95772 234 aa22.58■■□□□ 1.21
NXF1-216ENST00000533499 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
NXF1-216ENST00000533499 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
NXF1-216ENST00000533499 TEX13AQ9BXU3 409 aaPredicted RBP22.58■■□□□ 1.21
NXF1-216ENST00000533499 C8orf58Q8NAV2 365 aa22.57■■□□□ 1.2
NXF1-216ENST00000533499 AK7Q96M32 723 aa22.57■■□□□ 1.2
NXF1-216ENST00000533499 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
NXF1-216ENST00000533499 TJP1Q07157 1748 aa22.57■■□□□ 1.2
NXF1-216ENST00000533499 C5P01031 1676 aa22.56■■□□□ 1.2
NXF1-216ENST00000533499 NBPF14Q5TI25 921 aa22.56■■□□□ 1.2
NXF1-216ENST00000533499 STK32BQ9NY57 414 aa22.56■■□□□ 1.2
NXF1-216ENST00000533499 ZNF330Q9Y3S2 320 aaPredicted RBP22.56■■□□□ 1.2
NXF1-216ENST00000533499 RREB1Q92766 1687 aa22.55■■□□□ 1.2
NXF1-216ENST00000533499 TAF1LQ8IZX4 1826 aa22.55■■□□□ 1.2
NXF1-216ENST00000533499 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
NXF1-216ENST00000533499 CYP19A1P11511 503 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms