RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 PAPPAQ13219 1627 aa27.71■■■□□ 2.03
VPS51-211ENST00000533487 SIPA1L3O60292 1781 aaPredicted RBP27.71■■■□□ 2.03
VPS51-211ENST00000533487 LGR6Q9HBX8 967 aa27.71■■■□□ 2.03
VPS51-211ENST00000533487 TEFQ10587 303 aa27.7■■■□□ 2.02
VPS51-211ENST00000533487 MRS2Q9HD23 443 aa27.7■■■□□ 2.02
VPS51-211ENST00000533487 IL17REQ8NFR9 667 aa27.69■■■□□ 2.02
VPS51-211ENST00000533487 ATG3Q9NT62 314 aa27.69■■■□□ 2.02
VPS51-211ENST00000533487 CCNL1Q9UK58 526 aaPredicted RBP27.69■■■□□ 2.02
VPS51-211ENST00000533487 LMOD3Q0VAK6 560 aa27.68■■■□□ 2.02
VPS51-211ENST00000533487 TAF1LQ8IZX4 1826 aa27.68■■■□□ 2.02
VPS51-211ENST00000533487 ASAP1Q9ULH1 1129 aa27.67■■■□□ 2.02
VPS51-211ENST00000533487 C5P01031 1676 aa27.67■■■□□ 2.02
VPS51-211ENST00000533487 CICQ96RK0 1608 aaPredicted RBP27.67■■■□□ 2.02
VPS51-211ENST00000533487 QSER1Q2KHR3 1735 aa27.66■■■□□ 2.02
VPS51-211ENST00000533487 LOC102724428A0A0B4J2F2 783 aa27.65■■■□□ 2.02
VPS51-211ENST00000533487 SIK1P57059 783 aa27.65■■■□□ 2.02
VPS51-211ENST00000533487 PNISRQ8TF01 805 aaKnown RBP27.65■■■□□ 2.02
VPS51-211ENST00000533487 LRRC4BQ9NT99 713 aa27.65■■■□□ 2.02
VPS51-211ENST00000533487 STK32BQ9NY57 414 aa27.65■■■□□ 2.02
VPS51-211ENST00000533487 UBR2Q8IWV8 1755 aa27.63■■■□□ 2.01
VPS51-211ENST00000533487 TMPOP42166 694 aaKnown RBP27.62■■■□□ 2.01
VPS51-211ENST00000533487 SLC15A2Q16348 729 aa27.62■■■□□ 2.01
VPS51-211ENST00000533487 CCDC184Q52MB2 194 aa27.62■■■□□ 2.01
VPS51-211ENST00000533487 RIPK4P57078 832 aa27.6■■■□□ 2.01
VPS51-211ENST00000533487 TTC5Q8N0Z6 440 aa27.59■■■□□ 2.01
VPS51-211ENST00000533487 CCER2I3L3R5 266 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 ATP6V1AP38606 617 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 R3HDM1Q15032 1099 aaKnown RBP27.58■■■□□ 2.01
VPS51-211ENST00000533487 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2.01
VPS51-211ENST00000533487 MCM10Q7L590 875 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 CCDC146Q8IYE0 955 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 VSIG10Q8N0Z9 540 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 AKT1S1Q96B36 256 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 ANO8Q9HCE9 1232 aaPredicted RBP27.58■■■□□ 2.01
VPS51-211ENST00000533487 C4BP0C0L5 1744 aa27.58■■■□□ 2.01
VPS51-211ENST00000533487 NCBP3Q53F19 620 aaKnown RBP27.57■■■□□ 2
VPS51-211ENST00000533487 COL5A3P25940 1745 aaPredicted RBP27.57■■■□□ 2
VPS51-211ENST00000533487 TAF7Q15545 349 aaPredicted RBP27.56■■■□□ 2
VPS51-211ENST00000533487 ZNF790Q6PG37 636 aa27.56■■■□□ 2
VPS51-211ENST00000533487 RBM42Q9BTD8 480 aaKnown RBP27.56■■■□□ 2
VPS51-211ENST00000533487 BABAM1Q9NWV8 329 aa27.56■■■□□ 2
VPS51-211ENST00000533487 BTBD11A6QL63 1104 aa27.55■■■□□ 2
VPS51-211ENST00000533487 KCPQ6ZWJ8 1503 aa27.55■■■□□ 2
VPS51-211ENST00000533487 FLAD1Q8NFF5 587 aa27.54■■■□□ 2
VPS51-211ENST00000533487 RC3H1Q5TC82 1133 aaKnown RBP27.53■■■□□ 2
VPS51-211ENST00000533487 CASZ1Q86V15 1759 aa27.53■■■□□ 2
VPS51-211ENST00000533487 PTCD1O75127 700 aaKnown RBP27.52■■■□□ 2
VPS51-211ENST00000533487 DCTN1Q14203 1278 aa27.52■■■□□ 2
VPS51-211ENST00000533487 TEX13AQ9BXU3 409 aaPredicted RBP27.52■■■□□ 2
VPS51-211ENST00000533487 TJP1Q07157 1748 aa27.52■■■□□ 2
VPS51-211ENST00000533487 KDM3BQ7LBC6 1761 aa27.51■■□□□ 1.99
VPS51-211ENST00000533487 PSDA5PKW4 1024 aaPredicted RBP27.51■■□□□ 1.99
VPS51-211ENST00000533487 KCNQ4P56696 695 aa27.51■■□□□ 1.99
VPS51-211ENST00000533487 SLC39A6Q13433 755 aa27.51■■□□□ 1.99
VPS51-211ENST00000533487 ZNF827Q17R98 1081 aa27.51■■□□□ 1.99
VPS51-211ENST00000533487 TFCP2L1Q9NZI6 479 aa27.51■■□□□ 1.99
VPS51-211ENST00000533487 TUBGCP6Q96RT7 1819 aa27.51■■□□□ 1.99
VPS51-211ENST00000533487 CNTNAP4Q9C0A0 1308 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 APAF1O14727 1248 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 ITPK1Q13572 414 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 FMNL2Q96PY5 1086 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 SLC4A9Q96Q91 983 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 UBR3Q6ZT12 1888 aa27.5■■□□□ 1.99
VPS51-211ENST00000533487 CALD1Q05682 793 aaKnown RBP27.49■■□□□ 1.99
VPS51-211ENST00000533487 SLC16A10Q8TF71 515 aa27.49■■□□□ 1.99
VPS51-211ENST00000533487 AK7Q96M32 723 aa27.49■■□□□ 1.99
VPS51-211ENST00000533487 HEG1Q9ULI3 1381 aa27.48■■□□□ 1.99
VPS51-211ENST00000533487 LINC00116Q8NCU8 138 aa27.48■■□□□ 1.99
VPS51-211ENST00000533487 NEUROD2Q15784 382 aa27.47■■□□□ 1.99
VPS51-211ENST00000533487 CCDC27Q2M243 656 aa27.47■■□□□ 1.99
VPS51-211ENST00000533487 TRIM35Q9UPQ4 493 aa27.47■■□□□ 1.99
VPS51-211ENST00000533487 SSFA2P28290 1259 aa27.46■■□□□ 1.99
VPS51-211ENST00000533487 ZNF496Q96IT1 587 aaPredicted RBP27.46■■□□□ 1.99
VPS51-211ENST00000533487 RRP7AQ9Y3A4 280 aaKnown RBP27.46■■□□□ 1.99
VPS51-211ENST00000533487 LRP5O75197 1615 aa27.45■■□□□ 1.99
VPS51-211ENST00000533487 STARD3NLO95772 234 aa27.44■■□□□ 1.98
VPS51-211ENST00000533487 ADRA2BP18089 450 aa27.44■■□□□ 1.98
VPS51-211ENST00000533487 MYH14Q7Z406 1995 aaKnown RBP27.43■■□□□ 1.98
VPS51-211ENST00000533487 PNPLA7Q6ZV29 1317 aa27.42■■□□□ 1.98
VPS51-211ENST00000533487 FAM9BQ8IZU0 186 aa27.42■■□□□ 1.98
VPS51-211ENST00000533487 THUMPD2Q9BTF0 503 aaKnown RBP27.42■■□□□ 1.98
VPS51-211ENST00000533487 SNRPA1P09661 255 aaKnown RBP27.41■■□□□ 1.98
VPS51-211ENST00000533487 DNAJC10Q8IXB1 793 aa27.41■■□□□ 1.98
VPS51-211ENST00000533487 RTCBQ9Y3I0 505 aaKnown RBP27.41■■□□□ 1.98
VPS51-211ENST00000533487 GNPATO15228 680 aa27.4■■□□□ 1.98
VPS51-211ENST00000533487 RPS6KA4O75676 772 aa27.4■■□□□ 1.98
VPS51-211ENST00000533487 CYP19A1P11511 503 aaPredicted RBP27.4■■□□□ 1.98
VPS51-211ENST00000533487 CRKLP46109 303 aaKnown RBP27.4■■□□□ 1.98
VPS51-211ENST00000533487 MTFR1LQ9H019 292 aa27.4■■□□□ 1.98
VPS51-211ENST00000533487 SPON1Q9HCB6 807 aa27.39■■□□□ 1.98
VPS51-211ENST00000533487 CCDC87Q9NVE4 849 aa27.39■■□□□ 1.98
VPS51-211ENST00000533487 TSPYL4Q9UJ04 414 aa27.39■■□□□ 1.98
VPS51-211ENST00000533487 COL24A1Q17RW2 1714 aa27.38■■□□□ 1.97
VPS51-211ENST00000533487 LAMB4A4D0S4 1761 aa27.38■■□□□ 1.97
VPS51-211ENST00000533487 CFAP44Q96MT7 982 aa27.38■■□□□ 1.97
VPS51-211ENST00000533487 CHL1O00533 1208 aa27.37■■□□□ 1.97
VPS51-211ENST00000533487 KCNQ3O43525 872 aa27.37■■□□□ 1.97
VPS51-211ENST00000533487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.36■■□□□ 1.97
VPS51-211ENST00000533487 EIF4A1P60842 406 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms