RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PRIM1P49642 420 aaKnown RBP20.3■□□□□ 0.84
CTSB-228ENST00000533455 CUL4AQ13619 759 aa20.3■□□□□ 0.84
CTSB-228ENST00000533455 ESYT1Q9BSJ8 1104 aa20.3■□□□□ 0.84
CTSB-228ENST00000533455 ANAPC15P60006 121 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 LRSAM1Q6UWE0 723 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 MBD3O95983 291 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 TERF1P54274 439 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 GLIPR1L2Q4G1C9 344 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
CTSB-228ENST00000533455 TSPYL4Q9UJ04 414 aa20.29■□□□□ 0.84
CTSB-228ENST00000533455 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
CTSB-228ENST00000533455 ADAMTS13Q76LX8 1427 aa20.28■□□□□ 0.84
CTSB-228ENST00000533455 BRD1O95696 1058 aa20.28■□□□□ 0.84
CTSB-228ENST00000533455 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
CTSB-228ENST00000533455 NOL7Q9UMY1 257 aaKnown RBP20.28■□□□□ 0.84
CTSB-228ENST00000533455 F6X3S4 739 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 MCCP23508 829 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 NEK4P51957 841 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 SLC4A10Q6U841 1118 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 INTS4Q96HW7 963 aaKnown RBP20.27■□□□□ 0.84
CTSB-228ENST00000533455 TMEM63CQ9P1W3 806 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 MTHFSDQ2M296 383 aaKnown RBP20.27■□□□□ 0.84
CTSB-228ENST00000533455 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 LRRCC1Q9C099 1032 aa20.27■□□□□ 0.84
CTSB-228ENST00000533455 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 RTF1Q92541 710 aaKnown RBP20.26■□□□□ 0.83
CTSB-228ENST00000533455 TMEM2Q9UHN6 1383 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 ZNF500O60304 480 aaPredicted RBP20.26■□□□□ 0.83
CTSB-228ENST00000533455 GNAI3P08754 354 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 MX1P20591 662 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 STAP2Q9UGK3 403 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
CTSB-228ENST00000533455 SBNO1A3KN83 1393 aa20.25■□□□□ 0.83
CTSB-228ENST00000533455 FLT4P35916 1363 aa20.25■□□□□ 0.83
CTSB-228ENST00000533455 EPB41L2O43491 1005 aaKnown RBP20.24■□□□□ 0.83
CTSB-228ENST00000533455 FOXO3O43524 673 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 CHMLP26374 656 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 ATP8B2P98198 1209 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 AOX1Q06278 1338 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 CEP170BQ9Y4F5 1589 aaPredicted RBP20.24■□□□□ 0.83
CTSB-228ENST00000533455 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
CTSB-228ENST00000533455 STK31Q9BXU1 1019 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 SRCIN1Q9C0H9 1055 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 IGSF1Q8N6C5 1336 aa20.24■□□□□ 0.83
CTSB-228ENST00000533455 SOS1Q07889 1333 aaPredicted RBP20.23■□□□□ 0.83
CTSB-228ENST00000533455 MLECQ14165 292 aa20.23■□□□□ 0.83
CTSB-228ENST00000533455 TNRQ92752 1358 aa20.23■□□□□ 0.83
CTSB-228ENST00000533455 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.23■□□□□ 0.83
CTSB-228ENST00000533455 PALD1Q9ULE6 856 aa20.23■□□□□ 0.83
CTSB-228ENST00000533455 NSFL1CQ9UNZ2 370 aaKnown RBP20.23■□□□□ 0.83
CTSB-228ENST00000533455 MCM5P33992 734 aa20.22■□□□□ 0.83
CTSB-228ENST00000533455 SYCE3A1L190 88 aa20.22■□□□□ 0.83
CTSB-228ENST00000533455 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
CTSB-228ENST00000533455 FLIIQ13045 1269 aa20.21■□□□□ 0.83
CTSB-228ENST00000533455 CCDC30Q5VVM6 783 aa20.2■□□□□ 0.83
CTSB-228ENST00000533455 TSHZ3Q63HK5 1081 aa20.2■□□□□ 0.83
CTSB-228ENST00000533455 CHAMP1Q96JM3 812 aa20.2■□□□□ 0.83
CTSB-228ENST00000533455 ZKSCAN5Q9Y2L8 839 aa20.2■□□□□ 0.83
CTSB-228ENST00000533455 PLEKHG1Q9ULL1 1385 aa20.2■□□□□ 0.82
CTSB-228ENST00000533455 PNMA6EA0A0J9YXQ4 647 aa20.2■□□□□ 0.82
CTSB-228ENST00000533455 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
CTSB-228ENST00000533455 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
CTSB-228ENST00000533455 CCDC39Q9UFE4 941 aa20.19■□□□□ 0.82
CTSB-228ENST00000533455 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
CTSB-228ENST00000533455 SYAP1Q96A49 352 aaPredicted RBP20.17■□□□□ 0.82
CTSB-228ENST00000533455 EYA1Q99502 592 aa20.17■□□□□ 0.82
CTSB-228ENST00000533455 USP54Q70EL1 1684 aa20.17■□□□□ 0.82
CTSB-228ENST00000533455 TRIM6-TRIM34B2RNG4 842 aa20.17■□□□□ 0.82
CTSB-228ENST00000533455 FOXD4L5Q5VV16 416 aaPredicted RBP20.17■□□□□ 0.82
CTSB-228ENST00000533455 FOXD4L4Q8WXT5 416 aaPredicted RBP20.17■□□□□ 0.82
CTSB-228ENST00000533455 RILPL2Q969X0 211 aa20.17■□□□□ 0.82
CTSB-228ENST00000533455 PLEKHG5O94827 1062 aa20.16■□□□□ 0.82
CTSB-228ENST00000533455 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
CTSB-228ENST00000533455 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
CTSB-228ENST00000533455 NWD1Q149M9 1564 aa20.16■□□□□ 0.82
CTSB-228ENST00000533455 PDCL3Q9H2J4 239 aa20.15■□□□□ 0.82
CTSB-228ENST00000533455 TSPY26PQ9H489 355 aa20.15■□□□□ 0.82
CTSB-228ENST00000533455 ESF1Q9H501 851 aaKnown RBP20.15■□□□□ 0.82
CTSB-228ENST00000533455 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
CTSB-228ENST00000533455 MARF1Q9Y4F3 1742 aaKnown RBP20.15■□□□□ 0.82
CTSB-228ENST00000533455 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
CTSB-228ENST00000533455 CSPP1Q1MSJ5 1256 aa20.15■□□□□ 0.82
CTSB-228ENST00000533455 RGPD8O14715 1765 aaPredicted RBP20.14■□□□□ 0.82
CTSB-228ENST00000533455 HSPA4P34932 840 aa20.14■□□□□ 0.81
CTSB-228ENST00000533455 UNC5CLQ8IV45 518 aa20.14■□□□□ 0.81
CTSB-228ENST00000533455 SSH3Q8TE77 659 aa20.14■□□□□ 0.81
CTSB-228ENST00000533455 WDR33Q9C0J8 1336 aaKnown RBP20.14■□□□□ 0.81
CTSB-228ENST00000533455 SOX12O15370 315 aa20.14■□□□□ 0.81
CTSB-228ENST00000533455 TCHHQ07283 1943 aa20.13■□□□□ 0.81
CTSB-228ENST00000533455 GNAT3A8MTJ3 354 aa20.13■□□□□ 0.81
CTSB-228ENST00000533455 TMEM87AQ8NBN3 555 aa20.13■□□□□ 0.81
CTSB-228ENST00000533455 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
CTSB-228ENST00000533455 NUTM2FA1L443 756 aa20.12■□□□□ 0.81
CTSB-228ENST00000533455 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
CTSB-228ENST00000533455 PHF14O94880 888 aa20.12■□□□□ 0.81
CTSB-228ENST00000533455 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
CTSB-228ENST00000533455 MAP3K5Q99683 1374 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms