RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 NRKQ7Z2Y5 1582 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 HSP90AA1P07900 732 aaKnown RBP6.77□□□□□ -1.33
CKAP5-212ENST00000533413 ESCO1Q5FWF5 840 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 TNS3Q68CZ2 1445 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 MINK1Q8N4C8 1332 aaPredicted RBP6.77□□□□□ -1.33
CKAP5-212ENST00000533413 SPOCK2Q92563 424 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 MTA3Q9BTC8 594 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.77□□□□□ -1.33
CKAP5-212ENST00000533413 PDCL3Q9H2J4 239 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 PHF8Q9UPP1 1060 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 MRRFQ96E11 262 aaKnown RBP6.76□□□□□ -1.33
CKAP5-212ENST00000533413 HDAC5Q9UQL6 1122 aa6.76□□□□□ -1.33
CKAP5-212ENST00000533413 PNPLA6Q8IY17 1366 aa6.76□□□□□ -1.33
CKAP5-212ENST00000533413 KDM2BQ8NHM5 1336 aa6.76□□□□□ -1.33
CKAP5-212ENST00000533413 TSHZ1Q6ZSZ6 1077 aa6.76□□□□□ -1.33
CKAP5-212ENST00000533413 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
CKAP5-212ENST00000533413 PHRF1Q9P1Y6 1649 aaKnown RBP6.76□□□□□ -1.33
CKAP5-212ENST00000533413 BLMP54132 1417 aaPredicted RBP6.76□□□□□ -1.33
CKAP5-212ENST00000533413 NWD2Q9ULI1 1742 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 PLEKHG3A1L390 1219 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 CDCA7Q9BWT1 371 aaPredicted RBP6.75□□□□□ -1.33
CKAP5-212ENST00000533413 PPIP5K1Q6PFW1 1433 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 MYBPC2Q14324 1141 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 BECN1Q14457 450 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 NUDT16Q96DE0 195 aaKnown RBP6.75□□□□□ -1.33
CKAP5-212ENST00000533413 ORAI2Q96SN7 254 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 GABBR1Q9UBS5 961 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 CCDC61Q9Y6R9 512 aa6.75□□□□□ -1.33
CKAP5-212ENST00000533413 A6NJR5 290 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 FRAT2O75474 233 aaPredicted RBP6.74□□□□□ -1.33
CKAP5-212ENST00000533413 SAFB2Q14151 953 aaKnown RBP eCLIP6.74□□□□□ -1.33
CKAP5-212ENST00000533413 C8orf34Q49A92 452 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 DUSP27Q5VZP5 1158 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 PRR36Q9H6K5 1346 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 VIRMAQ69YN4 1812 aaKnown RBP6.74□□□□□ -1.33
CKAP5-212ENST00000533413 PARNO95453 639 aaKnown RBP6.74□□□□□ -1.33
CKAP5-212ENST00000533413 KRBA2Q6ZNG9 492 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 TESK2Q96S53 571 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.74□□□□□ -1.333e-7■■■■□ 23.4
CKAP5-212ENST00000533413 MYOM1P52179 1685 aa6.74□□□□□ -1.33
CKAP5-212ENST00000533413 SPATA31A3Q5VYP0 1347 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 COL14A1Q05707 1796 aaKnown RBP6.73□□□□□ -1.33
CKAP5-212ENST00000533413 APPP05067 770 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 SSFA2P28290 1259 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 PPP2R1AP30153 589 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 SRPK2P78362 688 aaKnown RBP6.73□□□□□ -1.33
CKAP5-212ENST00000533413 DISP3Q9P2K9 1392 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 ABCC6O95255 1503 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 FLIIQ13045 1269 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 KRT28Q7Z3Y7 464 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 PLCH1Q4KWH8 1693 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 PMM1Q92871 262 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 ZNF830Q96NB3 372 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-212ENST00000533413 IVNS1ABPQ9Y6Y0 642 aa6.73□□□□□ -1.33
CKAP5-212ENST00000533413 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 USP6P35125 1406 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 CPSF1Q10570 1443 aaKnown RBP6.72□□□□□ -1.33
CKAP5-212ENST00000533413 LRP6O75581 1613 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 SLFN5Q08AF3 891 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 SKIV2LQ15477 1246 aaKnown RBP6.72□□□□□ -1.33
CKAP5-212ENST00000533413 LONRF3Q496Y0 759 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 CREBRFQ8IUR6 639 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.72□□□□□ -1.33
CKAP5-212ENST00000533413 CREB3O43889 395 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 SH3BP5O60239 455 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 TPM2P07951 284 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 RHBDL3P58872 404 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 CCDC96Q2M329 555 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 NGDNQ8NEJ9 315 aaKnown RBP6.72□□□□□ -1.33
CKAP5-212ENST00000533413 UPF2Q9HAU5 1272 aaKnown RBP6.72□□□□□ -1.33
CKAP5-212ENST00000533413 PIK3C2AO00443 1686 aa6.72□□□□□ -1.33
CKAP5-212ENST00000533413 TTC21AQ8NDW8 1320 aa6.71□□□□□ -1.33
CKAP5-212ENST00000533413 SLIT3O75094 1523 aa6.71□□□□□ -1.33
CKAP5-212ENST00000533413 SEMA3FQ13275 785 aa6.71□□□□□ -1.33
CKAP5-212ENST00000533413 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.33
CKAP5-212ENST00000533413 SERPINA10Q9UK55 444 aa6.71□□□□□ -1.33
CKAP5-212ENST00000533413 SMAP1Q8IYB5 467 aaPredicted RBP6.71□□□□□ -1.34
CKAP5-212ENST00000533413 SREK1Q8WXA9 508 aaKnown RBP6.71□□□□□ -1.34
CKAP5-212ENST00000533413 RNF25Q96BH1 459 aaPredicted RBP6.71□□□□□ -1.34
CKAP5-212ENST00000533413 TMX4Q9H1E5 349 aaPredicted RBP6.71□□□□□ -1.34
CKAP5-212ENST00000533413 CIZ1Q9ULV3 898 aaPredicted RBP6.71□□□□□ -1.34
CKAP5-212ENST00000533413 SSH2Q76I76 1423 aa6.71□□□□□ -1.34
CKAP5-212ENST00000533413 ANKRD26Q9UPS8 1709 aa6.71□□□□□ -1.34
CKAP5-212ENST00000533413 FOXO3O43524 673 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 PDE6BP35913 854 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 L1TD1Q5T7N2 865 aaKnown RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 UTP14CQ5TAP6 766 aaKnown RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 CCDC146Q8IYE0 955 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 EDC4Q6P2E9 1401 aaKnown RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 ACEP12821 1306 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 ERBB3P21860 1342 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 MAPK8IP3Q9UPT6 1336 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 NRAPQ86VF7 1730 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 DHX16O60231 1041 aaKnown RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 PROM2Q8N271 834 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 MORC4Q8TE76 937 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 SPOCK3Q9BQ16 436 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 CGNL1Q0VF96 1302 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms