RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SDSP20132 328 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 WDR62O43379 1518 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 TCEANC2Q96MN5 208 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 MAGI3Q5TCQ9 1506 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 TNNT1P13805 278 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 NUCB1Q02818 461 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
BDNF-218ENST00000533246 TTC21BQ7Z4L5 1316 aa14.52□□□□□ -0.08
BDNF-218ENST00000533246 LETM1O95202 739 aaPredicted RBP14.52□□□□□ -0.08
BDNF-218ENST00000533246 KINO60870 393 aaKnown RBP14.52□□□□□ -0.09
BDNF-218ENST00000533246 ME1P48163 572 aa14.52□□□□□ -0.09
BDNF-218ENST00000533246 RBM25P49756 843 aaKnown RBP14.52□□□□□ -0.09
BDNF-218ENST00000533246 SLC39A6Q13433 755 aa14.52□□□□□ -0.09
BDNF-218ENST00000533246 CAMK4Q16566 473 aa14.52□□□□□ -0.09
BDNF-218ENST00000533246 GLRX3O76003 335 aaKnown RBP14.51□□□□□ -0.09
BDNF-218ENST00000533246 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
BDNF-218ENST00000533246 SAFBQ15424 915 aaKnown RBP eCLIP14.51□□□□□ -0.09
BDNF-218ENST00000533246 CCDC158Q5M9N0 1113 aa14.51□□□□□ -0.09
BDNF-218ENST00000533246 TTC39AQ5SRH9 613 aa14.51□□□□□ -0.09
BDNF-218ENST00000533246 GPATCH11Q8N954 259 aa14.51□□□□□ -0.09
BDNF-218ENST00000533246 TEX14Q8IWB6 1497 aa14.51□□□□□ -0.09
BDNF-218ENST00000533246 DTNBO60941 627 aa14.51□□□□□ -0.09
BDNF-218ENST00000533246 XRCC6P12956 609 aaKnown RBP eCLIP14.51□□□□□ -0.09
BDNF-218ENST00000533246 TBC1D2BQ9UPU7 963 aa14.51□□□□□ -0.09
BDNF-218ENST00000533246 ERICH4A6NGS2 130 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 MRPL50Q8N5N7 158 aaKnown RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 ZBTB3Q9H5J0 574 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 A2MP01023 1474 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 IDH1O75874 414 aaKnown RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 TPM3P06753 285 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 KRT85P78386 507 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 GUCY1B3Q02153 619 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 KIF6Q6ZMV9 814 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 HIP1O00291 1037 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 STK38Q15208 465 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 MTHFSDQ2M296 383 aaKnown RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 KCNH5Q8NCM2 988 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 A0A1W2PP64 1363 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 POLR3AO14802 1390 aaPredicted RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 SNRKQ9NRH2 765 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 ZBTB40Q9NUA8 1239 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 RBM27Q9P2N5 1060 aaKnown RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 TFIP11Q9UBB9 837 aaKnown RBP14.5□□□□□ -0.09
BDNF-218ENST00000533246 MAP3K2Q9Y2U5 619 aa14.5□□□□□ -0.09
BDNF-218ENST00000533246 KIF20AO95235 890 aa14.49□□□□□ -0.09
BDNF-218ENST00000533246 CTTNBP2Q8WZ74 1663 aa14.49□□□□□ -0.09
BDNF-218ENST00000533246 A0A087WZG4 1122 aa14.49□□□□□ -0.09
BDNF-218ENST00000533246 OTUD7AQ8TE49 926 aaPredicted RBP14.49□□□□□ -0.09
BDNF-218ENST00000533246 DBF4Q9UBU7 674 aaPredicted RBP14.49□□□□□ -0.09
BDNF-218ENST00000533246 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
BDNF-218ENST00000533246 CCDC39Q9UFE4 941 aa14.49□□□□□ -0.09
BDNF-218ENST00000533246 KIAA0556O60303 1618 aa14.49□□□□□ -0.09
BDNF-218ENST00000533246 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 TTC22Q5TAA0 569 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 UBE3BQ7Z3V4 1068 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 CCDC82Q8N4S0 544 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 PDILTQ8N807 584 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 BICDL1Q6ZP65 573 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
BDNF-218ENST00000533246 TNMDQ9H2S6 317 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 CHPF2Q9P2E5 772 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 PIBF1Q8WXW3 757 aa14.48□□□□□ -0.09
BDNF-218ENST00000533246 CFAP65Q6ZU64 1925 aaKnown RBP14.47□□□□□ -0.09
BDNF-218ENST00000533246 G2E3Q7L622 706 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 IL16Q14005 1332 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 CFAP43Q8NDM7 1665 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 LARP1Q6PKG0 1096 aaKnown RBP14.47□□□□□ -0.09
BDNF-218ENST00000533246 FILIP1Q7Z7B0 1213 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 MPHOSPH8Q99549 860 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
BDNF-218ENST00000533246 SMC2O95347 1197 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 BAG4O95429 457 aaKnown RBP14.47□□□□□ -0.09
BDNF-218ENST00000533246 GPTP24298 496 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 TTLL5Q6EMB2 1281 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 ZSCAN30Q86W11 494 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 SPATA32Q96LK8 384 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
BDNF-218ENST00000533246 CABLES1Q8TDN4 633 aa14.46□□□□□ -0.09
BDNF-218ENST00000533246 NUP133Q8WUM0 1156 aa14.46□□□□□ -0.09
BDNF-218ENST00000533246 GTPBP4Q9BZE4 634 aaKnown RBP14.46□□□□□ -0.09
BDNF-218ENST00000533246 BCCIPQ9P287 314 aaKnown RBP eCLIP14.46□□□□□ -0.09
BDNF-218ENST00000533246 PDE1AP54750 535 aa14.46□□□□□ -0.09
BDNF-218ENST00000533246 PA2G4Q9UQ80 394 aaKnown RBP14.46□□□□□ -0.09
BDNF-218ENST00000533246 NSD2O96028 1365 aa14.46□□□□□ -0.09
BDNF-218ENST00000533246 DUOX2Q9NRD8 1548 aa14.46□□□□□ -0.09
BDNF-218ENST00000533246 TSR1Q2NL82 804 aaKnown RBP14.46□□□□□ -0.1
BDNF-218ENST00000533246 ANKRD44Q8N8A2 993 aa14.46□□□□□ -0.1
BDNF-218ENST00000533246 ABCF2Q9UG63 623 aa14.46□□□□□ -0.1
BDNF-218ENST00000533246 TRIM35Q9UPQ4 493 aa14.46□□□□□ -0.1
BDNF-218ENST00000533246 SPATA31E1Q6ZUB1 1445 aa14.45□□□□□ -0.1
BDNF-218ENST00000533246 BRPF1P55201 1214 aaPredicted RBP14.45□□□□□ -0.1
BDNF-218ENST00000533246 EYA1Q99502 592 aa14.45□□□□□ -0.1
BDNF-218ENST00000533246 PTPRCP08575 1304 aa14.45□□□□□ -0.1
BDNF-218ENST00000533246 KRT28Q7Z3Y7 464 aa14.45□□□□□ -0.1
BDNF-218ENST00000533246 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms