RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
CAPN1-224ENST00000533129 RBM33Q96EV2 1170 aaKnown RBP18.11■□□□□ 0.49
CAPN1-224ENST00000533129 PRPF40AO75400 957 aaKnown RBP18.1■□□□□ 0.49
CAPN1-224ENST00000533129 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
CAPN1-224ENST00000533129 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-224ENST00000533129 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
CAPN1-224ENST00000533129 MTERF4Q7Z6M4 381 aaKnown RBP18.09■□□□□ 0.49
CAPN1-224ENST00000533129 PROSER2Q86WR7 435 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-224ENST00000533129 CCDC39Q9UFE4 941 aa18.09■□□□□ 0.49
CAPN1-224ENST00000533129 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.49
CAPN1-224ENST00000533129 RBM10P98175 930 aaKnown RBP18.08■□□□□ 0.49
CAPN1-224ENST00000533129 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-224ENST00000533129 ZDHHC9Q9Y397 364 aa18.08■□□□□ 0.49
CAPN1-224ENST00000533129 UQCRHLA0A096LP55 91 aa18.08■□□□□ 0.48
CAPN1-224ENST00000533129 UQCRHP07919 91 aa18.08■□□□□ 0.48
CAPN1-224ENST00000533129 PHACTR3Q96KR7 559 aa18.08■□□□□ 0.48
CAPN1-224ENST00000533129 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.48
CAPN1-224ENST00000533129 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.48
CAPN1-224ENST00000533129 ATP10DQ9P241 1426 aa18.08■□□□□ 0.48
CAPN1-224ENST00000533129 DYNC1I1O14576 645 aa18.07■□□□□ 0.48
CAPN1-224ENST00000533129 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
CAPN1-224ENST00000533129 RBM27Q9P2N5 1060 aaKnown RBP18.07■□□□□ 0.48
CAPN1-224ENST00000533129 MBD3O95983 291 aa18.07■□□□□ 0.48
CAPN1-224ENST00000533129 ANKRD44Q8N8A2 993 aa18.07■□□□□ 0.48
CAPN1-224ENST00000533129 FAM13BQ9NYF5 915 aa18.07■□□□□ 0.48
CAPN1-224ENST00000533129 REC8O95072 547 aa18.06■□□□□ 0.48
CAPN1-224ENST00000533129 TMEM63CQ9P1W3 806 aa18.06■□□□□ 0.48
CAPN1-224ENST00000533129 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
CAPN1-224ENST00000533129 LMTK3Q96Q04 1460 aa18.05■□□□□ 0.48
CAPN1-224ENST00000533129 PEAK1Q9H792 1746 aa18.05■□□□□ 0.48
CAPN1-224ENST00000533129 SDSP20132 328 aa18.05■□□□□ 0.48
CAPN1-224ENST00000533129 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-224ENST00000533129 ESCO1Q5FWF5 840 aa18.05■□□□□ 0.48
CAPN1-224ENST00000533129 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-224ENST00000533129 HSPA2P54652 639 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 NLRP6P59044 892 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-224ENST00000533129 MARF1Q9Y4F3 1742 aaKnown RBP18.04■□□□□ 0.48
CAPN1-224ENST00000533129 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 SYCE3A1L190 88 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 SASS6Q6UVJ0 657 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
CAPN1-224ENST00000533129 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-224ENST00000533129 HMOX1P09601 288 aa18.03■□□□□ 0.48
CAPN1-224ENST00000533129 DCCP43146 1447 aa18.03■□□□□ 0.48
CAPN1-224ENST00000533129 FLT4P35916 1363 aa18.03■□□□□ 0.48
CAPN1-224ENST00000533129 MAP3K19Q56UN5 1328 aa18.03■□□□□ 0.48
CAPN1-224ENST00000533129 ABTB2Q8N961 1025 aa18.02■□□□□ 0.48
CAPN1-224ENST00000533129 KIF1AQ12756 1690 aa18.02■□□□□ 0.48
CAPN1-224ENST00000533129 EIF4A2Q14240 407 aaKnown RBP18.02■□□□□ 0.48
CAPN1-224ENST00000533129 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
CAPN1-224ENST00000533129 ERC2O15083 957 aa18.02■□□□□ 0.47
CAPN1-224ENST00000533129 OTUD7AQ8TE49 926 aaPredicted RBP18.02■□□□□ 0.47
CAPN1-224ENST00000533129 TMEM94Q12767 1356 aa18.01■□□□□ 0.47
CAPN1-224ENST00000533129 PSME1Q06323 249 aa18.01■□□□□ 0.47
CAPN1-224ENST00000533129 CEP85Q6P2H3 762 aa18.01■□□□□ 0.47
CAPN1-224ENST00000533129 RGS12O14924 1447 aa18.01■□□□□ 0.47
CAPN1-224ENST00000533129 C1orf167Q5SNV9 1468 aa18■□□□□ 0.47
CAPN1-224ENST00000533129 SOX12O15370 315 aa18■□□□□ 0.47
CAPN1-224ENST00000533129 RGPD1P0DJD0 1748 aa18■□□□□ 0.47
CAPN1-224ENST00000533129 MCM2P49736 904 aa18■□□□□ 0.47
CAPN1-224ENST00000533129 NSFL1CQ9UNZ2 370 aaKnown RBP18■□□□□ 0.47
CAPN1-224ENST00000533129 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
CAPN1-224ENST00000533129 RTL1A6NKG5 1358 aa17.98■□□□□ 0.47
CAPN1-224ENST00000533129 BRD1O95696 1058 aa17.98■□□□□ 0.47
CAPN1-224ENST00000533129 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-224ENST00000533129 ORAI2Q96SN7 254 aa17.98■□□□□ 0.47
CAPN1-224ENST00000533129 PRDM4Q9UKN5 801 aa17.98■□□□□ 0.47
CAPN1-224ENST00000533129 SYAP1Q96A49 352 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-224ENST00000533129 AMPHP49418 695 aa17.97■□□□□ 0.47
CAPN1-224ENST00000533129 TSPY26PQ9H489 355 aa17.97■□□□□ 0.47
CAPN1-224ENST00000533129 STRCQ7RTU9 1775 aa17.97■□□□□ 0.47
CAPN1-224ENST00000533129 ARHGEF10O15013 1369 aa17.97■□□□□ 0.47
CAPN1-224ENST00000533129 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
CAPN1-224ENST00000533129 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
CAPN1-224ENST00000533129 ATF3P18847 181 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 MST1RQ04912 1400 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 KIAA2012Q0VF49 1180 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 CUL4AQ13619 759 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 SMAP1Q8IYB5 467 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-224ENST00000533129 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 MSH6P52701 1360 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
CAPN1-224ENST00000533129 SMARCA5O60264 1052 aaPredicted RBP17.96■□□□□ 0.46
CAPN1-224ENST00000533129 CHAMP1Q96JM3 812 aa17.96■□□□□ 0.46
CAPN1-224ENST00000533129 INTS4Q96HW7 963 aaKnown RBP17.95■□□□□ 0.46
CAPN1-224ENST00000533129 PHF14O94880 888 aa17.95■□□□□ 0.46
CAPN1-224ENST00000533129 NEK4P51957 841 aa17.95■□□□□ 0.46
CAPN1-224ENST00000533129 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
CAPN1-224ENST00000533129 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
CAPN1-224ENST00000533129 PTPRCP08575 1304 aa17.95■□□□□ 0.46
CAPN1-224ENST00000533129 TRPM3Q9HCF6 1732 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-224ENST00000533129 NFAT5O94916 1531 aa17.94■□□□□ 0.46
CAPN1-224ENST00000533129 FOXO3O43524 673 aa17.94■□□□□ 0.46
CAPN1-224ENST00000533129 PTMAP06454 111 aaKnown RBP17.94■□□□□ 0.46
CAPN1-224ENST00000533129 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
CAPN1-224ENST00000533129 TAOK2Q9UL54 1235 aa17.93■□□□□ 0.46
CAPN1-224ENST00000533129 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.93■□□□□ 0.462e-6■□□□□ 9.3
CAPN1-224ENST00000533129 HOXC9P31274 260 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms