RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 RBM42Q9BTD8 480 aaKnown RBP22.22■■□□□ 1.15
UBXN1-213ENST00000532904 NCAPD2Q15021 1401 aa22.22■■□□□ 1.15
UBXN1-213ENST00000532904 GSPT1P15170 499 aaKnown RBP22.21■■□□□ 1.15
UBXN1-213ENST00000532904 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
UBXN1-213ENST00000532904 MAP3K5Q99683 1374 aa22.21■■□□□ 1.15
UBXN1-213ENST00000532904 CADPS2Q86UW7 1296 aa22.21■■□□□ 1.15
UBXN1-213ENST00000532904 PLEKHM2Q8IWE5 1019 aa22.21■■□□□ 1.15
UBXN1-213ENST00000532904 DCTPP1Q9H773 170 aa22.21■■□□□ 1.15
UBXN1-213ENST00000532904 LTV1Q96GA3 475 aaPredicted RBP22.2■■□□□ 1.14
UBXN1-213ENST00000532904 MSH6P52701 1360 aa22.2■■□□□ 1.14
UBXN1-213ENST00000532904 CAMTA1Q9Y6Y1 1673 aa22.2■■□□□ 1.14
UBXN1-213ENST00000532904 GAS2L3Q86XJ1 694 aa22.19■■□□□ 1.14
UBXN1-213ENST00000532904 RGPD2P0DJD1 1756 aa22.19■■□□□ 1.14
UBXN1-213ENST00000532904 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
UBXN1-213ENST00000532904 STRCQ7RTU9 1775 aa22.19■■□□□ 1.14
UBXN1-213ENST00000532904 LMTK3Q96Q04 1460 aa22.19■■□□□ 1.14
UBXN1-213ENST00000532904 XIRP1Q702N8 1843 aaKnown RBP22.19■■□□□ 1.14
UBXN1-213ENST00000532904 XPCQ01831 940 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-213ENST00000532904 INTS3Q68E01 1043 aaKnown RBP22.18■■□□□ 1.14
UBXN1-213ENST00000532904 SSFA2P28290 1259 aa22.17■■□□□ 1.14
UBXN1-213ENST00000532904 HSPA2P54652 639 aa22.17■■□□□ 1.14
UBXN1-213ENST00000532904 RABEP1Q15276 862 aa22.17■■□□□ 1.14
UBXN1-213ENST00000532904 TTC22Q5TAA0 569 aa22.17■■□□□ 1.14
UBXN1-213ENST00000532904 NBPF6Q5VWK0 638 aa22.17■■□□□ 1.14
UBXN1-213ENST00000532904 NBPF4Q96M43 638 aa22.17■■□□□ 1.14
UBXN1-213ENST00000532904 SOS1Q07889 1333 aaPredicted RBP22.17■■□□□ 1.14
UBXN1-213ENST00000532904 TSPYL4Q9UJ04 414 aa22.16■■□□□ 1.14
UBXN1-213ENST00000532904 CACNA1FO60840 1977 aa22.15■■□□□ 1.14
UBXN1-213ENST00000532904 LMO7Q8WWI1 1683 aa22.15■■□□□ 1.14
UBXN1-213ENST00000532904 GOLGA6L22H0YM25 854 aa22.15■■□□□ 1.14
UBXN1-213ENST00000532904 MED1Q15648 1581 aaPredicted RBP22.15■■□□□ 1.14
UBXN1-213ENST00000532904 ANKRD44Q8N8A2 993 aa22.15■■□□□ 1.14
UBXN1-213ENST00000532904 ATP10DQ9P241 1426 aa22.14■■□□□ 1.13
UBXN1-213ENST00000532904 ESPNB1AK53 854 aa22.14■■□□□ 1.13
UBXN1-213ENST00000532904 PTPRCP08575 1304 aa22.14■■□□□ 1.13
UBXN1-213ENST00000532904 NPHP3Q7Z494 1330 aa22.14■■□□□ 1.13
UBXN1-213ENST00000532904 KDM4FA0A1W2PPD8 638 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 RGS12O14924 1447 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 KRT24Q2M2I5 525 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 LMOD2Q6P5Q4 547 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 IL17REQ8NFR9 667 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 USP26Q9BXU7 913 aa22.13■■□□□ 1.13
UBXN1-213ENST00000532904 IBTKQ9P2D0 1353 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-213ENST00000532904 ABCC6O95255 1503 aa22.12■■□□□ 1.13
UBXN1-213ENST00000532904 BAG4O95429 457 aaKnown RBP22.12■■□□□ 1.13
UBXN1-213ENST00000532904 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-213ENST00000532904 USHBP1Q8N6Y0 703 aa22.12■■□□□ 1.13
UBXN1-213ENST00000532904 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
UBXN1-213ENST00000532904 KLHL40Q2TBA0 621 aa22.11■■□□□ 1.13
UBXN1-213ENST00000532904 UBE2Q2Q8WVN8 375 aa22.11■■□□□ 1.13
UBXN1-213ENST00000532904 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 NAP1L5Q96NT1 182 aaPredicted RBP22.1■■□□□ 1.13
UBXN1-213ENST00000532904 ERBB4Q15303 1308 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 PXDNQ92626 1479 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 RGPD5Q99666 1765 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 C16orf71Q8IYS4 520 aaPredicted RBP22.1■■□□□ 1.13
UBXN1-213ENST00000532904 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 TRIM44Q96DX7 344 aaPredicted RBP22.1■■□□□ 1.13
UBXN1-213ENST00000532904 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 TNS3Q68CZ2 1445 aa22.1■■□□□ 1.13
UBXN1-213ENST00000532904 PLEKHO1Q53GL0 409 aaPredicted RBP22.09■■□□□ 1.13
UBXN1-213ENST00000532904 CEP85Q6P2H3 762 aa22.09■■□□□ 1.13
UBXN1-213ENST00000532904 CRYBG1Q9Y4K1 1723 aa22.09■■□□□ 1.13
UBXN1-213ENST00000532904 ZBTB7CA1YPR0 619 aa22.08■■□□□ 1.13
UBXN1-213ENST00000532904 NUCB2P80303 420 aa22.08■■□□□ 1.13
UBXN1-213ENST00000532904 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.13
UBXN1-213ENST00000532904 COL18A1P39060 1754 aa22.08■■□□□ 1.12
UBXN1-213ENST00000532904 FAM208AQ9UK61 1670 aaKnown RBP22.08■■□□□ 1.12
UBXN1-213ENST00000532904 CYP2E1P05181 493 aaPredicted RBP22.07■■□□□ 1.12
UBXN1-213ENST00000532904 LRRC59Q96AG4 307 aaKnown RBP22.07■■□□□ 1.12
UBXN1-213ENST00000532904 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
UBXN1-213ENST00000532904 DDX49Q9Y6V7 483 aaKnown RBP22.07■■□□□ 1.12
UBXN1-213ENST00000532904 KDM3BQ7LBC6 1761 aa22.06■■□□□ 1.12
UBXN1-213ENST00000532904 SDSP20132 328 aa22.06■■□□□ 1.12
UBXN1-213ENST00000532904 OTUD7AQ8TE49 926 aaPredicted RBP22.06■■□□□ 1.12
UBXN1-213ENST00000532904 CCDC173Q0VFZ6 552 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 PPP1R9BQ96SB3 815 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 ERBB3P21860 1342 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 SLC4A2P04920 1241 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 CASC1Q6TDU7 716 aa22.05■■□□□ 1.12
UBXN1-213ENST00000532904 CWC22Q9HCG8 908 aaKnown RBP22.05■■□□□ 1.12
UBXN1-213ENST00000532904 SPATA31A3Q5VYP0 1347 aa22.04■■□□□ 1.12
UBXN1-213ENST00000532904 CCDC30Q5VVM6 783 aa22.03■■□□□ 1.12
UBXN1-213ENST00000532904 NASPP49321 788 aaPredicted RBP22.03■■□□□ 1.12
UBXN1-213ENST00000532904 ZNF445P59923 1031 aa22.02■■□□□ 1.12
UBXN1-213ENST00000532904 ZNF530Q6P9A1 599 aaPredicted RBP22.02■■□□□ 1.12
UBXN1-213ENST00000532904 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
UBXN1-213ENST00000532904 ADAMTS7Q9UKP4 1686 aa22.02■■□□□ 1.12
UBXN1-213ENST00000532904 SMARCA5O60264 1052 aaPredicted RBP22.01■■□□□ 1.11
UBXN1-213ENST00000532904 MCTP1Q6DN14 999 aa22.01■■□□□ 1.11
UBXN1-213ENST00000532904 CHMP4AQ9BY43 222 aa22.01■■□□□ 1.11
UBXN1-213ENST00000532904 CPDO75976 1380 aa22■■□□□ 1.11
UBXN1-213ENST00000532904 ST18O60284 1047 aa22■■□□□ 1.11
UBXN1-213ENST00000532904 HOXB7P09629 217 aa22■■□□□ 1.11
UBXN1-213ENST00000532904 DDX17Q92841 729 aaKnown RBP22■■□□□ 1.11
UBXN1-213ENST00000532904 MEIS3Q99687 375 aa22■■□□□ 1.11
UBXN1-213ENST00000532904 LMBRD1Q9NUN5 540 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms