RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 HSP90AB3PQ58FF7 597 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 MNS1Q8NEH6 495 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 CYP46A1Q9Y6A2 500 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 TDO2P48775 406 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 SEPT7Q16181 437 aaKnown RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 DNAAF4Q8WXU2 420 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
CTNND1-232ENST00000532649 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 RALGAPBQ86X10 1494 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 MCM2P49736 904 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 ERCC4Q92889 916 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-232ENST00000532649 NKTRP30414 1462 aaKnown RBP10.33□□□□□ -0.76
CTNND1-232ENST00000532649 TRIM21P19474 475 aaKnown RBP10.33□□□□□ -0.76
CTNND1-232ENST00000532649 MAGEC2Q9UBF1 373 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-232ENST00000532649 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 GPTP24298 496 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 STK3Q13188 491 aa10.33□□□□□ -0.76
CTNND1-232ENST00000532649 KIF1BPQ96EK5 621 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 PDCL3Q9H2J4 239 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 AKAP2Q9Y2D5 859 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 SHANK2Q9UPX8 1470 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 CCDC69A6NI79 296 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 ERLIN2O94905 339 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 IFIT5Q13325 482 aaKnown RBP10.32□□□□□ -0.76
CTNND1-232ENST00000532649 SKIDA1Q1XH10 827 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 ANKIB1Q9P2G1 1089 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 PDILTQ8N807 584 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 NUP133Q8WUM0 1156 aa10.32□□□□□ -0.76
CTNND1-232ENST00000532649 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 IFIT1P09914 478 aaKnown RBP10.31□□□□□ -0.76
CTNND1-232ENST00000532649 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-232ENST00000532649 PDCP20941 246 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 A0A087WZG4 1122 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 FLIIQ13045 1269 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 NAT10Q9H0A0 1025 aaKnown RBP10.31□□□□□ -0.76
CTNND1-232ENST00000532649 RPGRQ92834 1020 aaKnown RBP10.31□□□□□ -0.76
CTNND1-232ENST00000532649 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
CTNND1-232ENST00000532649 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
CTNND1-232ENST00000532649 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-232ENST00000532649 KCNA6P17658 529 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 DNAI2Q9GZS0 605 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 CTNNA3Q9UI47 895 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 LRRFIP2Q9Y608 721 aaKnown RBP10.3□□□□□ -0.76
CTNND1-232ENST00000532649 ATP10AO60312 1499 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 RAB11FIP3O75154 756 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 SDF4Q9BRK5 362 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 MBIPQ9NS73 344 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 GSE1Q14687 1217 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 EIF2AK4Q9P2K8 1649 aaKnown RBP10.3□□□□□ -0.76
CTNND1-232ENST00000532649 TXLNAP40222 546 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 TMOD2Q9NZR1 351 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 ATP7AQ04656 1500 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 EZRP15311 586 aaKnown RBP10.3□□□□□ -0.76
CTNND1-232ENST00000532649 SMARCE1Q969G3 411 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 ACSBG1Q96GR2 724 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 UBAC1Q9BSL1 405 aa10.3□□□□□ -0.76
CTNND1-232ENST00000532649 MATR3P43243 847 aaKnown RBP eCLIP10.29□□□□□ -0.766e-7■■■■□ 22.1
CTNND1-232ENST00000532649 BLOC1S2Q6QNY1 142 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 ABCC1P33527 1531 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 ASXL1Q8IXJ9 1541 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 PTPRCP08575 1304 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 ANKRD18BA2A2Z9 1011 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 H0YHG0 523 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-232ENST00000532649 SNRPA1P09661 255 aaKnown RBP10.29□□□□□ -0.76
CTNND1-232ENST00000532649 MX1P20591 662 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 PLCD4Q9BRC7 762 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-232ENST00000532649 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 BOLA2Q9H3K6 86 aa10.29□□□□□ -0.76
CTNND1-232ENST00000532649 MAPKBP1O60336 1514 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 CEBPZQ03701 1054 aaKnown RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 JAKMIP1Q96N16 626 aaKnown RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 WDHD1O75717 1129 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 DNMT1P26358 1616 aaKnown RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 UHRF1BP1Q6BDS2 1440 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 RFC4P35249 363 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 SLC5A1P13866 664 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 ENOX2Q16206 610 aaKnown RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 TTLL5Q6EMB2 1281 aa10.28□□□□□ -0.76
CTNND1-232ENST00000532649 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 ZNF396Q96N95 335 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-232ENST00000532649 STK38Q15208 465 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms