RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 FMNL2Q96PY5 1086 aa17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 CCDC8Q9H0W5 538 aaPredicted RBP17.47■□□□□ 0.39
PCDHA9-202ENST00000532602 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 DUOX2Q9NRD8 1548 aa17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 MSH6P52701 1360 aa17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 UGGT2Q9NYU1 1516 aa17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.39
PCDHA9-202ENST00000532602 UBAP1LF5GYI3 381 aa17.46■□□□□ 0.38
PCDHA9-202ENST00000532602 KIAA0556O60303 1618 aa17.46■□□□□ 0.38
PCDHA9-202ENST00000532602 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 ANXA1P04083 346 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 RARSP54136 660 aaKnown RBP17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 DACH1Q9UI36 760 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 AKAP2Q9Y2D5 859 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 BLOC1S2Q6QNY1 142 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 PTPRKQ15262 1439 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 TTLL5Q6EMB2 1281 aa17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 BMP2KQ9NSY1 1161 aaPredicted RBP17.45■□□□□ 0.38
PCDHA9-202ENST00000532602 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 LUC7LQ9NQ29 371 aaKnown RBP17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 RIMS2Q9UQ26 1411 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 C8orf37Q96NL8 207 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 HSP90B2PQ58FF3 399 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 ZHX3Q9H4I2 956 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 CCP110O43303 1012 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 HSP90AB3PQ58FF7 597 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 ZNHIT6Q9NWK9 470 aaKnown RBP17.44■□□□□ 0.38
PCDHA9-202ENST00000532602 MINDY4BA8MYZ0 360 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 FAM13BQ9NYF5 915 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 USP5P45974 858 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 SLC4A8Q2Y0W8 1093 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 IFIT1P09914 478 aaKnown RBP17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 CAVIN4Q5BKX8 364 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 WASF1Q92558 559 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 FBXO3Q9UK99 471 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 IFIT5Q13325 482 aaKnown RBP17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 DNAAF4Q8WXU2 420 aa17.43■□□□□ 0.38
PCDHA9-202ENST00000532602 IFNL2Q8IZJ0 200 aa17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 CCDC39Q9UFE4 941 aa17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 UHRF1BP1LA0JNW5 1464 aa17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 A0A087WZG4 1122 aa17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 SMC2O95347 1197 aa17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
PCDHA9-202ENST00000532602 MRE11P49959 708 aa17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 TXLNBQ8N3L3 684 aa17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 NKTRP30414 1462 aaKnown RBP17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 KRT85P78386 507 aa17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
PCDHA9-202ENST00000532602 MX1P20591 662 aa17.4■□□□□ 0.38
PCDHA9-202ENST00000532602 LRRC59Q96AG4 307 aaKnown RBP17.4■□□□□ 0.38
PCDHA9-202ENST00000532602 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
PCDHA9-202ENST00000532602 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
PCDHA9-202ENST00000532602 TTC21BQ7Z4L5 1316 aa17.4■□□□□ 0.38
PCDHA9-202ENST00000532602 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.38
PCDHA9-202ENST00000532602 ME1P48163 572 aa17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 IMMTQ16891 758 aaKnown RBP17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 LARP1BQ659C4 914 aaKnown RBP17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 TRAK2O60296 914 aa17.39■□□□□ 0.37
PCDHA9-202ENST00000532602 ZNF76P36508 570 aa17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 FLIIQ13045 1269 aa17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 DZIP1Q86YF9 867 aaKnown RBP17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 DBF4Q9UBU7 674 aaPredicted RBP17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 ANKRD18BA2A2Z9 1011 aa17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 IBSPP21815 317 aaPredicted RBP17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
PCDHA9-202ENST00000532602 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
PCDHA9-202ENST00000532602 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms