RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 KDM3BQ7LBC6 1761 aa12.26□□□□□ -0.45
TRIM53AP-201ENST00000532014 UBR2Q8IWV8 1755 aa12.26□□□□□ -0.45
TRIM53AP-201ENST00000532014 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
TRIM53AP-201ENST00000532014 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
TRIM53AP-201ENST00000532014 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
TRIM53AP-201ENST00000532014 LY75O60449 1722 aa12.25□□□□□ -0.45
TRIM53AP-201ENST00000532014 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
TRIM53AP-201ENST00000532014 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
TRIM53AP-201ENST00000532014 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 TRIM37O94972 964 aa12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 NEFMP07197 916 aa12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 PIGBQ92521 554 aa12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
TRIM53AP-201ENST00000532014 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
TRIM53AP-201ENST00000532014 CCDC27Q2M243 656 aa12.22□□□□□ -0.45
TRIM53AP-201ENST00000532014 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
TRIM53AP-201ENST00000532014 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
TRIM53AP-201ENST00000532014 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
TRIM53AP-201ENST00000532014 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
TRIM53AP-201ENST00000532014 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
TRIM53AP-201ENST00000532014 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
TRIM53AP-201ENST00000532014 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.46
TRIM53AP-201ENST00000532014 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.46
TRIM53AP-201ENST00000532014 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
TRIM53AP-201ENST00000532014 ASAP1Q9ULH1 1129 aa12.2□□□□□ -0.46
TRIM53AP-201ENST00000532014 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
TRIM53AP-201ENST00000532014 C5P01031 1676 aa12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 RREB1Q92766 1687 aa12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 TJP1Q07157 1748 aa12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
TRIM53AP-201ENST00000532014 KCNQ3O43525 872 aa12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 ZNF853P0CG23 659 aa12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 CABP4P57796 275 aa12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 LMOD3Q0VAK6 560 aa12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
TRIM53AP-201ENST00000532014 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRIM53AP-201ENST00000532014 TEFQ10587 303 aa12.17□□□□□ -0.46
TRIM53AP-201ENST00000532014 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
TRIM53AP-201ENST00000532014 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
TRIM53AP-201ENST00000532014 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
TRIM53AP-201ENST00000532014 PROM2Q8N271 834 aa12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 CHL1O00533 1208 aa12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 ZNF790Q6PG37 636 aa12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 PALLDQ8WX93 1383 aa12.16□□□□□ -0.46
TRIM53AP-201ENST00000532014 MYH14Q7Z406 1995 aaKnown RBP12.15□□□□□ -0.46
TRIM53AP-201ENST00000532014 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
TRIM53AP-201ENST00000532014 DEFB132Q7Z7B7 95 aa12.15□□□□□ -0.46
TRIM53AP-201ENST00000532014 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
TRIM53AP-201ENST00000532014 CFAP44Q96MT7 982 aa12.15□□□□□ -0.46
TRIM53AP-201ENST00000532014 LAMB4A4D0S4 1761 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 ZBED9Q6R2W3 1325 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 PLSCR1O15162 318 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 APBA3O96018 575 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 KCNQ4P56696 695 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 LRRC4BQ9NT99 713 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
TRIM53AP-201ENST00000532014 IL16Q14005 1332 aa12.13□□□□□ -0.47
TRIM53AP-201ENST00000532014 TUBGCP6Q96RT7 1819 aa12.13□□□□□ -0.47
TRIM53AP-201ENST00000532014 EN1Q05925 392 aaPredicted RBP12.13□□□□□ -0.47
TRIM53AP-201ENST00000532014 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
TRIM53AP-201ENST00000532014 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
TRIM53AP-201ENST00000532014 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
TRIM53AP-201ENST00000532014 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 LAS1LQ9Y4W2 734 aaKnown RBP12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 FANCIQ9NVI1 1328 aa12.12□□□□□ -0.47
TRIM53AP-201ENST00000532014 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 SIK1P57059 783 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 ITPK1Q13572 414 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 GNAI1P63096 354 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
TRIM53AP-201ENST00000532014 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
TRIM53AP-201ENST00000532014 CALD1Q05682 793 aaKnown RBP12.1□□□□□ -0.47
TRIM53AP-201ENST00000532014 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
TRIM53AP-201ENST00000532014 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
TRIM53AP-201ENST00000532014 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms