RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 PALLDQ8WX93 1383 aa28.28■■■□□ 2.12
AP004608.1-201ENST00000531319 MAPK8IP3Q9UPT6 1336 aa28.28■■■□□ 2.12
AP004608.1-201ENST00000531319 ATG3Q9NT62 314 aa28.28■■■□□ 2.12
AP004608.1-201ENST00000531319 RUNDC1Q96C34 613 aa28.27■■■□□ 2.12
AP004608.1-201ENST00000531319 DCTN1Q14203 1278 aa28.26■■■□□ 2.12
AP004608.1-201ENST00000531319 MCM10Q7L590 875 aa28.26■■■□□ 2.12
AP004608.1-201ENST00000531319 KCNQ4P56696 695 aa28.26■■■□□ 2.11
AP004608.1-201ENST00000531319 NEFMP07197 916 aa28.24■■■□□ 2.11
AP004608.1-201ENST00000531319 TMPOP42166 694 aaKnown RBP28.24■■■□□ 2.11
AP004608.1-201ENST00000531319 HTATSF1O43719 755 aaKnown RBP28.23■■■□□ 2.11
AP004608.1-201ENST00000531319 ANO8Q9HCE9 1232 aaPredicted RBP28.23■■■□□ 2.11
AP004608.1-201ENST00000531319 RRP7AQ9Y3A4 280 aaKnown RBP28.23■■■□□ 2.11
AP004608.1-201ENST00000531319 SMARCC1Q92922 1105 aaPredicted RBP28.21■■■□□ 2.11
AP004608.1-201ENST00000531319 SLC4A9Q96Q91 983 aa28.21■■■□□ 2.11
AP004608.1-201ENST00000531319 KCPQ6ZWJ8 1503 aa28.19■■■□□ 2.1
AP004608.1-201ENST00000531319 RIPK4P57078 832 aa28.19■■■□□ 2.1
AP004608.1-201ENST00000531319 SLC27A3Q5K4L6 730 aa28.19■■■□□ 2.1
AP004608.1-201ENST00000531319 MIER1Q8N108 512 aa28.19■■■□□ 2.1
AP004608.1-201ENST00000531319 THUMPD2Q9BTF0 503 aaKnown RBP28.19■■■□□ 2.1
AP004608.1-201ENST00000531319 SLC39A6Q13433 755 aa28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 RTF1Q92541 710 aaKnown RBP28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 CCNL1Q9UK58 526 aaPredicted RBP28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 UBR2Q8IWV8 1755 aa28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 C5P01031 1676 aa28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 APAF1O14727 1248 aa28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 TRIM35Q9UPQ4 493 aa28.18■■■□□ 2.1
AP004608.1-201ENST00000531319 ZNF831Q5JPB2 1677 aa28.17■■■□□ 2.1
AP004608.1-201ENST00000531319 TAF1LQ8IZX4 1826 aa28.17■■■□□ 2.1
AP004608.1-201ENST00000531319 LOC102724428A0A0B4J2F2 783 aa28.17■■■□□ 2.1
AP004608.1-201ENST00000531319 CCER2I3L3R5 266 aa28.17■■■□□ 2.1
AP004608.1-201ENST00000531319 SIK1P57059 783 aa28.17■■■□□ 2.1
AP004608.1-201ENST00000531319 TEFQ10587 303 aa28.17■■■□□ 2.1
AP004608.1-201ENST00000531319 ITPK1Q13572 414 aa28.15■■■□□ 2.1
AP004608.1-201ENST00000531319 NEUROD2Q15784 382 aa28.15■■■□□ 2.1
AP004608.1-201ENST00000531319 ZNF827Q17R98 1081 aa28.15■■■□□ 2.1
AP004608.1-201ENST00000531319 CICQ96RK0 1608 aaPredicted RBP28.14■■■□□ 2.1
AP004608.1-201ENST00000531319 TJP1Q07157 1748 aa28.14■■■□□ 2.1
AP004608.1-201ENST00000531319 FAM9BQ8IZU0 186 aa28.13■■■□□ 2.09
AP004608.1-201ENST00000531319 PTCD1O75127 700 aaKnown RBP28.12■■■□□ 2.09
AP004608.1-201ENST00000531319 SENP3-EIF4A1A0A087X0R7 540 aa28.11■■■□□ 2.09
AP004608.1-201ENST00000531319 KCNQ3O43525 872 aa28.11■■■□□ 2.09
AP004608.1-201ENST00000531319 R3HDM1Q15032 1099 aaKnown RBP28.11■■■□□ 2.09
AP004608.1-201ENST00000531319 AKT1S1Q96B36 256 aa28.11■■■□□ 2.09
AP004608.1-201ENST00000531319 COL5A3P25940 1745 aaPredicted RBP28.11■■■□□ 2.09
AP004608.1-201ENST00000531319 PSDA5PKW4 1024 aaPredicted RBP28.1■■■□□ 2.09
AP004608.1-201ENST00000531319 LINC00116Q8NCU8 138 aa28.1■■■□□ 2.09
AP004608.1-201ENST00000531319 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
AP004608.1-201ENST00000531319 C4BP0C0L5 1744 aa28.1■■■□□ 2.09
AP004608.1-201ENST00000531319 ZNF790Q6PG37 636 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 KDM3BQ7LBC6 1761 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 TUBGCP6Q96RT7 1819 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 BTBD11A6QL63 1104 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 ATP6V1AP38606 617 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 SLC15A2Q16348 729 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 MIS18AQ9NYP9 233 aa28.09■■■□□ 2.09
AP004608.1-201ENST00000531319 TAF7Q15545 349 aaPredicted RBP28.08■■■□□ 2.09
AP004608.1-201ENST00000531319 NBPF14Q5TI25 921 aa28.08■■■□□ 2.09
AP004608.1-201ENST00000531319 LMOD3Q0VAK6 560 aa28.07■■■□□ 2.08
AP004608.1-201ENST00000531319 ZNF496Q96IT1 587 aaPredicted RBP28.07■■■□□ 2.08
AP004608.1-201ENST00000531319 AMIGO3Q86WK7 504 aa28.05■■■□□ 2.08
AP004608.1-201ENST00000531319 STK32BQ9NY57 414 aa28.05■■■□□ 2.08
AP004608.1-201ENST00000531319 PDGFDQ9GZP0 370 aaPredicted RBP28.04■■■□□ 2.08
AP004608.1-201ENST00000531319 CASZ1Q86V15 1759 aa28.04■■■□□ 2.08
AP004608.1-201ENST00000531319 SRCAPQ6ZRS2 3230 aa28.03■■■□□ 2.08
AP004608.1-201ENST00000531319 QSER1Q2KHR3 1735 aa28.03■■■□□ 2.08
AP004608.1-201ENST00000531319 TTC5Q8N0Z6 440 aa28.02■■■□□ 2.08
AP004608.1-201ENST00000531319 HEG1Q9ULI3 1381 aa28.02■■■□□ 2.08
AP004608.1-201ENST00000531319 DNAJC10Q8IXB1 793 aa28.01■■■□□ 2.08
AP004608.1-201ENST00000531319 UBR3Q6ZT12 1888 aa28.01■■■□□ 2.07
AP004608.1-201ENST00000531319 MYH14Q7Z406 1995 aaKnown RBP28■■■□□ 2.07
AP004608.1-201ENST00000531319 VSIG10Q8N0Z9 540 aa28■■■□□ 2.07
AP004608.1-201ENST00000531319 PNPLA7Q6ZV29 1317 aa27.99■■■□□ 2.07
AP004608.1-201ENST00000531319 SMIM5Q71RC9 77 aa27.99■■■□□ 2.07
AP004608.1-201ENST00000531319 CCDC27Q2M243 656 aa27.98■■■□□ 2.07
AP004608.1-201ENST00000531319 FMNL2Q96PY5 1086 aa27.98■■■□□ 2.07
AP004608.1-201ENST00000531319 PRAMEF22A3QJZ6 481 aa27.97■■■□□ 2.07
AP004608.1-201ENST00000531319 NCBP3Q53F19 620 aaKnown RBP27.97■■■□□ 2.07
AP004608.1-201ENST00000531319 CNTNAP4Q9C0A0 1308 aa27.96■■■□□ 2.07
AP004608.1-201ENST00000531319 CHL1O00533 1208 aa27.96■■■□□ 2.07
AP004608.1-201ENST00000531319 CYP19A1P11511 503 aaPredicted RBP27.96■■■□□ 2.07
AP004608.1-201ENST00000531319 WWC1Q8IX03 1113 aa27.96■■■□□ 2.07
AP004608.1-201ENST00000531319 TFCP2L1Q9NZI6 479 aa27.96■■■□□ 2.07
AP004608.1-201ENST00000531319 ZNF853P0CG23 659 aa27.95■■■□□ 2.07
AP004608.1-201ENST00000531319 CRKLP46109 303 aaKnown RBP27.95■■■□□ 2.07
AP004608.1-201ENST00000531319 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.07
AP004608.1-201ENST00000531319 RC3H1Q5TC82 1133 aaKnown RBP27.94■■■□□ 2.06
AP004608.1-201ENST00000531319 INTS5Q6P9B9 1019 aaKnown RBP27.94■■■□□ 2.06
AP004608.1-201ENST00000531319 TSPYL4Q9UJ04 414 aa27.94■■■□□ 2.06
AP004608.1-201ENST00000531319 AK7Q96M32 723 aa27.93■■■□□ 2.06
AP004608.1-201ENST00000531319 BABAM1Q9NWV8 329 aa27.93■■■□□ 2.06
AP004608.1-201ENST00000531319 GNPATO15228 680 aa27.92■■■□□ 2.06
AP004608.1-201ENST00000531319 SALL2Q9Y467 1007 aaPredicted RBP27.92■■■□□ 2.06
AP004608.1-201ENST00000531319 COL23A1Q86Y22 540 aaPredicted RBP27.92■■■□□ 2.06
AP004608.1-201ENST00000531319 CFAP44Q96MT7 982 aa27.92■■■□□ 2.06
AP004608.1-201ENST00000531319 LAS1LQ9Y4W2 734 aaKnown RBP27.9■■■□□ 2.06
AP004608.1-201ENST00000531319 USP16Q9Y5T5 823 aa27.9■■■□□ 2.06
AP004608.1-201ENST00000531319 LAMB4A4D0S4 1761 aa27.89■■■□□ 2.06
AP004608.1-201ENST00000531319 SNRPA1P09661 255 aaKnown RBP27.89■■■□□ 2.06
AP004608.1-201ENST00000531319 HMGB2P26583 209 aaKnown RBP27.89■■■□□ 2.06
AP004608.1-201ENST00000531319 MBIPQ9NS73 344 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms