RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 C5P01031 1676 aa17.32■□□□□ 0.36
LINC01016-204ENST00000531046 TUBGCP6Q96RT7 1819 aa17.31■□□□□ 0.36
LINC01016-204ENST00000531046 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
LINC01016-204ENST00000531046 GAS2L2Q8NHY3 880 aa17.31■□□□□ 0.36
LINC01016-204ENST00000531046 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
LINC01016-204ENST00000531046 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
LINC01016-204ENST00000531046 PNPLA7Q6ZV29 1317 aa17.3■□□□□ 0.36
LINC01016-204ENST00000531046 FCHSD2O94868 740 aa17.3■□□□□ 0.36
LINC01016-204ENST00000531046 ATP6V1AP38606 617 aa17.3■□□□□ 0.36
LINC01016-204ENST00000531046 ITPK1Q13572 414 aa17.3■□□□□ 0.36
LINC01016-204ENST00000531046 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
LINC01016-204ENST00000531046 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
LINC01016-204ENST00000531046 MYBBP1AQ9BQG0 1328 aaKnown RBP17.29■□□□□ 0.36
LINC01016-204ENST00000531046 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
LINC01016-204ENST00000531046 PTCD1O75127 700 aaKnown RBP17.29■□□□□ 0.36
LINC01016-204ENST00000531046 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
LINC01016-204ENST00000531046 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
LINC01016-204ENST00000531046 MSH5O43196 834 aa17.28■□□□□ 0.36
LINC01016-204ENST00000531046 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
LINC01016-204ENST00000531046 AK7Q96M32 723 aa17.28■□□□□ 0.36
LINC01016-204ENST00000531046 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
LINC01016-204ENST00000531046 C4BP0C0L5 1744 aa17.27■□□□□ 0.36
LINC01016-204ENST00000531046 SLC39A6Q13433 755 aa17.27■□□□□ 0.36
LINC01016-204ENST00000531046 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
LINC01016-204ENST00000531046 MTFR1LQ9H019 292 aa17.27■□□□□ 0.36
LINC01016-204ENST00000531046 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
LINC01016-204ENST00000531046 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
LINC01016-204ENST00000531046 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
LINC01016-204ENST00000531046 QSER1Q2KHR3 1735 aa17.26■□□□□ 0.35
LINC01016-204ENST00000531046 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
LINC01016-204ENST00000531046 MRC1P22897 1456 aa17.25■□□□□ 0.35
LINC01016-204ENST00000531046 PHF14O94880 888 aa17.25■□□□□ 0.35
LINC01016-204ENST00000531046 HMGB2P26583 209 aaKnown RBP17.24■□□□□ 0.35
LINC01016-204ENST00000531046 PTGER2P43116 358 aa17.24■□□□□ 0.35
LINC01016-204ENST00000531046 TEFQ10587 303 aa17.24■□□□□ 0.35
LINC01016-204ENST00000531046 GNPATO15228 680 aa17.23■□□□□ 0.35
LINC01016-204ENST00000531046 NEFMP07197 916 aa17.22■□□□□ 0.35
LINC01016-204ENST00000531046 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
LINC01016-204ENST00000531046 MCM10Q7L590 875 aa17.22■□□□□ 0.35
LINC01016-204ENST00000531046 SLC16A10Q8TF71 515 aa17.22■□□□□ 0.35
LINC01016-204ENST00000531046 PLEKHF1Q96S99 279 aa17.22■□□□□ 0.35
LINC01016-204ENST00000531046 UBR3Q6ZT12 1888 aa17.21■□□□□ 0.35
LINC01016-204ENST00000531046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
LINC01016-204ENST00000531046 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
LINC01016-204ENST00000531046 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
LINC01016-204ENST00000531046 SGIP1Q9BQI5 828 aa17.21■□□□□ 0.35
LINC01016-204ENST00000531046 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
LINC01016-204ENST00000531046 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
LINC01016-204ENST00000531046 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
LINC01016-204ENST00000531046 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
LINC01016-204ENST00000531046 COL5A3P25940 1745 aaPredicted RBP17.19■□□□□ 0.34
LINC01016-204ENST00000531046 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
LINC01016-204ENST00000531046 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
LINC01016-204ENST00000531046 GOLGB1Q14789 3259 aaKnown RBP17.19■□□□□ 0.34
LINC01016-204ENST00000531046 TJP1Q07157 1748 aa17.18■□□□□ 0.34
LINC01016-204ENST00000531046 SSFA2P28290 1259 aa17.18■□□□□ 0.34
LINC01016-204ENST00000531046 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
LINC01016-204ENST00000531046 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC01016-204ENST00000531046 RC3H1Q5TC82 1133 aaKnown RBP17.18■□□□□ 0.34
LINC01016-204ENST00000531046 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
LINC01016-204ENST00000531046 ARXQ96QS3 562 aa17.18■□□□□ 0.34
LINC01016-204ENST00000531046 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
LINC01016-204ENST00000531046 RTCBQ9Y3I0 505 aaKnown RBP17.18■□□□□ 0.34
LINC01016-204ENST00000531046 MYH14Q7Z406 1995 aaKnown RBP17.18■□□□□ 0.34
LINC01016-204ENST00000531046 CNTNAP4Q9C0A0 1308 aa17.18■□□□□ 0.34
LINC01016-204ENST00000531046 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
LINC01016-204ENST00000531046 KCNQ3O43525 872 aa17.17■□□□□ 0.34
LINC01016-204ENST00000531046 POLD1P28340 1107 aa17.17■□□□□ 0.34
LINC01016-204ENST00000531046 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
LINC01016-204ENST00000531046 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
LINC01016-204ENST00000531046 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
LINC01016-204ENST00000531046 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
LINC01016-204ENST00000531046 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
LINC01016-204ENST00000531046 HTATSF1O43719 755 aaKnown RBP17.16■□□□□ 0.34
LINC01016-204ENST00000531046 RPS6KA4O75676 772 aa17.15■□□□□ 0.34
LINC01016-204ENST00000531046 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
LINC01016-204ENST00000531046 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
LINC01016-204ENST00000531046 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
LINC01016-204ENST00000531046 FHDC1Q9C0D6 1143 aaPredicted RBP17.15■□□□□ 0.34
LINC01016-204ENST00000531046 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
LINC01016-204ENST00000531046 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
LINC01016-204ENST00000531046 CYP19A1P11511 503 aaPredicted RBP17.14■□□□□ 0.33
LINC01016-204ENST00000531046 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
LINC01016-204ENST00000531046 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
LINC01016-204ENST00000531046 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
LINC01016-204ENST00000531046 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
LINC01016-204ENST00000531046 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
LINC01016-204ENST00000531046 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
LINC01016-204ENST00000531046 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
LINC01016-204ENST00000531046 RRP7AQ9Y3A4 280 aaKnown RBP17.13■□□□□ 0.33
LINC01016-204ENST00000531046 CICQ96RK0 1608 aaPredicted RBP17.13■□□□□ 0.33
LINC01016-204ENST00000531046 UTRNP46939 3433 aa17.12■□□□□ 0.33
LINC01016-204ENST00000531046 ANP32CO43423 234 aa17.12■□□□□ 0.33
LINC01016-204ENST00000531046 RIPK4P57078 832 aa17.12■□□□□ 0.33
LINC01016-204ENST00000531046 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
LINC01016-204ENST00000531046 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
LINC01016-204ENST00000531046 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
LINC01016-204ENST00000531046 RFC4P35249 363 aa17.11■□□□□ 0.33
LINC01016-204ENST00000531046 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
LINC01016-204ENST00000531046 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms