RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
RPUSD4-205ENST00000530903 MEGF6O75095 1541 aa13.14□□□□□ -0.31
RPUSD4-205ENST00000530903 PARP4Q9UKK3 1724 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-205ENST00000530903 PLCG2P16885 1265 aa13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 RIPK4P57078 832 aa13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
RPUSD4-205ENST00000530903 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-205ENST00000530903 BCL9LQ86UU0 1499 aa13.12□□□□□ -0.31
RPUSD4-205ENST00000530903 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-205ENST00000530903 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
RPUSD4-205ENST00000530903 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-205ENST00000530903 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
RPUSD4-205ENST00000530903 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
RPUSD4-205ENST00000530903 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
RPUSD4-205ENST00000530903 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
RPUSD4-205ENST00000530903 AFF2P51816 1311 aa13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 ZNF521Q96K83 1311 aa13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 USP21Q9UK80 565 aa13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
RPUSD4-205ENST00000530903 IL2RBP14784 551 aa13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 SPATA31A5Q5VU36 1347 aa13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 SPATA31A7Q8IWB4 1347 aa13.09□□□□□ -0.31
RPUSD4-205ENST00000530903 DCTN1Q14203 1278 aa13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 OCEL1Q9H607 264 aa13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 MAP3K5Q99683 1374 aa13.08□□□□□ -0.32
RPUSD4-205ENST00000530903 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
RPUSD4-205ENST00000530903 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
RPUSD4-205ENST00000530903 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
RPUSD4-205ENST00000530903 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
RPUSD4-205ENST00000530903 VPS72Q15906 364 aa13.07□□□□□ -0.32
RPUSD4-205ENST00000530903 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
RPUSD4-205ENST00000530903 MCM10Q7L590 875 aa13.06□□□□□ -0.32
RPUSD4-205ENST00000530903 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
RPUSD4-205ENST00000530903 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
RPUSD4-205ENST00000530903 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
RPUSD4-205ENST00000530903 PYGBP11216 843 aa13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
RPUSD4-205ENST00000530903 ATRNO75882 1429 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 GLI3P10071 1580 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 PHKG2P15735 406 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
RPUSD4-205ENST00000530903 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 E9PSI1 815 aa13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 CYP27B1O15528 508 aa13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 DDX54Q8TDD1 881 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-205ENST00000530903 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
RPUSD4-205ENST00000530903 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
RPUSD4-205ENST00000530903 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
RPUSD4-205ENST00000530903 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
RPUSD4-205ENST00000530903 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
RPUSD4-205ENST00000530903 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
RPUSD4-205ENST00000530903 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
RPUSD4-205ENST00000530903 A0A0G2JS52 829 aa13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 GJD4Q96KN9 370 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 IL16Q14005 1332 aa13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 KDM6AO15550 1401 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
RPUSD4-205ENST00000530903 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
RPUSD4-205ENST00000530903 EXOC5O00471 708 aa13□□□□□ -0.33
RPUSD4-205ENST00000530903 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
RPUSD4-205ENST00000530903 TSR2Q969E8 191 aaKnown RBP13□□□□□ -0.33
RPUSD4-205ENST00000530903 SIPA1L3O60292 1781 aaPredicted RBP13□□□□□ -0.33
RPUSD4-205ENST00000530903 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
RPUSD4-205ENST00000530903 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
RPUSD4-205ENST00000530903 DDB1Q16531 1140 aa12.99□□□□□ -0.33
RPUSD4-205ENST00000530903 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
RPUSD4-205ENST00000530903 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms