RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 DDX11L8A8MPP1 907 aa21.24■□□□□ 0.99
BRCA2-204ENST00000530893 LMO7Q8WWI1 1683 aa21.24■□□□□ 0.99
BRCA2-204ENST00000530893 OTUD7AQ8TE49 926 aaPredicted RBP21.24■□□□□ 0.99
BRCA2-204ENST00000530893 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
BRCA2-204ENST00000530893 SMARCA5O60264 1052 aaPredicted RBP21.23■□□□□ 0.99
BRCA2-204ENST00000530893 ATP8B2P98198 1209 aa21.23■□□□□ 0.99
BRCA2-204ENST00000530893 USP26Q9BXU7 913 aa21.23■□□□□ 0.99
BRCA2-204ENST00000530893 KDM3BQ7LBC6 1761 aa21.23■□□□□ 0.99
BRCA2-204ENST00000530893 HDGFL1Q5TGJ6 251 aa21.22■□□□□ 0.99
BRCA2-204ENST00000530893 NBPF6Q5VWK0 638 aa21.22■□□□□ 0.99
BRCA2-204ENST00000530893 NBPF4Q96M43 638 aa21.22■□□□□ 0.99
BRCA2-204ENST00000530893 SLIT3O75094 1523 aa21.22■□□□□ 0.99
BRCA2-204ENST00000530893 REC8O95072 547 aa21.22■□□□□ 0.99
BRCA2-204ENST00000530893 NCAPD2Q15021 1401 aa21.22■□□□□ 0.99
BRCA2-204ENST00000530893 PDE1AP54750 535 aa21.21■□□□□ 0.99
BRCA2-204ENST00000530893 USHBP1Q8N6Y0 703 aa21.21■□□□□ 0.99
BRCA2-204ENST00000530893 LRRCC1Q9C099 1032 aa21.21■□□□□ 0.99
BRCA2-204ENST00000530893 HSP90AA1P07900 732 aaKnown RBP21.21■□□□□ 0.99
BRCA2-204ENST00000530893 OVOS2A0A0G2JMS6 1433 aa21.2■□□□□ 0.99
BRCA2-204ENST00000530893 APBB1O00213 710 aa21.2■□□□□ 0.98
BRCA2-204ENST00000530893 PTMSP20962 102 aa21.2■□□□□ 0.98
BRCA2-204ENST00000530893 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.98
BRCA2-204ENST00000530893 AKAP4Q5JQC9 854 aa21.2■□□□□ 0.98
BRCA2-204ENST00000530893 L1TD1Q5T7N2 865 aaKnown RBP21.2■□□□□ 0.98
BRCA2-204ENST00000530893 RAB3GAP1Q15042 981 aa21.19■□□□□ 0.98
BRCA2-204ENST00000530893 SALL3Q9BXA9 1300 aa21.19■□□□□ 0.98
BRCA2-204ENST00000530893 IBTKQ9P2D0 1353 aaPredicted RBP21.19■□□□□ 0.98
BRCA2-204ENST00000530893 EIF4A1P60842 406 aaKnown RBP21.19■□□□□ 0.98
BRCA2-204ENST00000530893 PLEKHO1Q53GL0 409 aaPredicted RBP21.19■□□□□ 0.98
BRCA2-204ENST00000530893 GBP4Q96PP9 640 aa21.19■□□□□ 0.98
BRCA2-204ENST00000530893 CD2BP2O95400 341 aaKnown RBP21.18■□□□□ 0.98
BRCA2-204ENST00000530893 SRCIN1Q9C0H9 1055 aa21.18■□□□□ 0.98
BRCA2-204ENST00000530893 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
BRCA2-204ENST00000530893 ERC2O15083 957 aa21.17■□□□□ 0.98
BRCA2-204ENST00000530893 NECTIN2Q92692 538 aa21.17■□□□□ 0.98
BRCA2-204ENST00000530893 USP44Q9H0E7 712 aa21.17■□□□□ 0.98
BRCA2-204ENST00000530893 UBTFL1P0CB47 393 aaPredicted RBP21.17■□□□□ 0.98
BRCA2-204ENST00000530893 ARHGEF25Q86VW2 580 aa21.17■□□□□ 0.98
BRCA2-204ENST00000530893 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
BRCA2-204ENST00000530893 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
BRCA2-204ENST00000530893 RGPD2P0DJD1 1756 aa21.17■□□□□ 0.98
BRCA2-204ENST00000530893 TRAK2O60296 914 aa21.16■□□□□ 0.98
BRCA2-204ENST00000530893 GCP02774 474 aa21.16■□□□□ 0.98
BRCA2-204ENST00000530893 LMTK3Q96Q04 1460 aa21.16■□□□□ 0.98
BRCA2-204ENST00000530893 CAMTA1Q9Y6Y1 1673 aa21.16■□□□□ 0.98
BRCA2-204ENST00000530893 PNMA6EA0A0J9YXQ4 647 aa21.16■□□□□ 0.98
BRCA2-204ENST00000530893 TNPO1Q92973 898 aaKnown RBP21.16■□□□□ 0.98
BRCA2-204ENST00000530893 KIF1AQ12756 1690 aa21.16■□□□□ 0.98
BRCA2-204ENST00000530893 AOX1Q06278 1338 aa21.15■□□□□ 0.98
BRCA2-204ENST00000530893 TEFQ10587 303 aa21.15■□□□□ 0.98
BRCA2-204ENST00000530893 RBM33Q96EV2 1170 aaKnown RBP21.15■□□□□ 0.98
BRCA2-204ENST00000530893 STAP2Q9UGK3 403 aa21.15■□□□□ 0.98
BRCA2-204ENST00000530893 LRRFIP2Q9Y608 721 aaKnown RBP21.15■□□□□ 0.98
BRCA2-204ENST00000530893 MX1P20591 662 aa21.14■□□□□ 0.98
BRCA2-204ENST00000530893 SSH3Q8TE77 659 aa21.14■□□□□ 0.98
BRCA2-204ENST00000530893 MST1RQ04912 1400 aa21.14■□□□□ 0.98
BRCA2-204ENST00000530893 TRPM3Q9HCF6 1732 aaPredicted RBP21.14■□□□□ 0.98
BRCA2-204ENST00000530893 ZNF530Q6P9A1 599 aaPredicted RBP21.14■□□□□ 0.97
BRCA2-204ENST00000530893 IL27Q8NEV9 243 aa21.14■□□□□ 0.97
BRCA2-204ENST00000530893 LGR6Q9HBX8 967 aa21.14■□□□□ 0.97
BRCA2-204ENST00000530893 ST18O60284 1047 aa21.13■□□□□ 0.97
BRCA2-204ENST00000530893 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
BRCA2-204ENST00000530893 BRPF3Q9ULD4 1205 aa21.13■□□□□ 0.97
BRCA2-204ENST00000530893 CLEC17AQ6ZS10 378 aa21.12■□□□□ 0.97
BRCA2-204ENST00000530893 PHAXQ9H814 394 aaKnown RBP21.12■□□□□ 0.97
BRCA2-204ENST00000530893 BTBD11A6QL63 1104 aa21.12■□□□□ 0.97
BRCA2-204ENST00000530893 SKOR2Q2VWA4 1001 aaPredicted RBP21.12■□□□□ 0.97
BRCA2-204ENST00000530893 C1orf141Q5JVX7 400 aa21.12■□□□□ 0.97
BRCA2-204ENST00000530893 ORAI2Q96SN7 254 aa21.11■□□□□ 0.97
BRCA2-204ENST00000530893 ISY1Q9ULR0 285 aaKnown RBP21.11■□□□□ 0.97
BRCA2-204ENST00000530893 POLA2Q14181 598 aa21.1■□□□□ 0.97
BRCA2-204ENST00000530893 LRRC59Q96AG4 307 aaKnown RBP21.1■□□□□ 0.97
BRCA2-204ENST00000530893 FSD2A1L4K1 749 aa21.09■□□□□ 0.97
BRCA2-204ENST00000530893 RNMTO43148 476 aaKnown RBP21.09■□□□□ 0.97
BRCA2-204ENST00000530893 EPB41L2O43491 1005 aaKnown RBP21.09■□□□□ 0.97
BRCA2-204ENST00000530893 EIF2S2P20042 333 aaKnown RBP21.09■□□□□ 0.97
BRCA2-204ENST00000530893 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
BRCA2-204ENST00000530893 CHPF2Q9P2E5 772 aa21.09■□□□□ 0.97
BRCA2-204ENST00000530893 ZBTB7CA1YPR0 619 aa21.09■□□□□ 0.97
BRCA2-204ENST00000530893 GOLGA6L3A6NEY3 463 aa21.09■□□□□ 0.97
BRCA2-204ENST00000530893 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
BRCA2-204ENST00000530893 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
BRCA2-204ENST00000530893 DBF4Q9UBU7 674 aaPredicted RBP21.09■□□□□ 0.97
BRCA2-204ENST00000530893 BEND3Q5T5X7 828 aa21.08■□□□□ 0.97
BRCA2-204ENST00000530893 NUCB2P80303 420 aa21.07■□□□□ 0.96
BRCA2-204ENST00000530893 ESYT1Q9BSJ8 1104 aa21.07■□□□□ 0.96
BRCA2-204ENST00000530893 ADAMTS7Q9UKP4 1686 aa21.07■□□□□ 0.96
BRCA2-204ENST00000530893 HEG1Q9ULI3 1381 aa21.07■□□□□ 0.96
BRCA2-204ENST00000530893 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
BRCA2-204ENST00000530893 C1orf167Q5SNV9 1468 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 SIPA1L3O60292 1781 aaPredicted RBP21.06■□□□□ 0.96
BRCA2-204ENST00000530893 MCCP23508 829 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 HSP90AB4PQ58FF6 505 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 KRT28Q7Z3Y7 464 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 PPP1R42Q7Z4L9 355 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 HDAC5Q9UQL6 1122 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 PXDNQ92626 1479 aa21.06■□□□□ 0.96
BRCA2-204ENST00000530893 PI4KAP2A4QPH2 592 aa21.05■□□□□ 0.96
BRCA2-204ENST00000530893 GOLGA6L22H0YM25 854 aa21.05■□□□□ 0.96
BRCA2-204ENST00000530893 ANAPC15P60006 121 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms