RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 ACSBG1Q96GR2 724 aa10.99□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 RGS17Q9UGC6 210 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 RCAN3Q9UKA8 241 aa10.99□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 KCNQ3O43525 872 aa10.98□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 SLC39A6Q13433 755 aa10.98□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 POTEAQ6S8J7 498 aa10.98□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 TWISTNBQ3B726 338 aaPredicted RBP10.97□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 FAM182BQ5T319 152 aa10.97□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 PIGBQ92521 554 aa10.97□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 GLI3P10071 1580 aa10.97□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 PKD1L3Q7Z443 1732 aa10.97□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 CT47B1P0C2W7 299 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 EIF4A1P60842 406 aaKnown RBP10.96□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 ZNF790Q6PG37 636 aa10.96□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 KRT27Q7Z3Y8 459 aa10.96□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 TSPYL6Q8N831 410 aa10.96□□□□□ -0.65
NEDD8-MDP1-201ENST00000530579 VAMP4O75379 141 aa10.95□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 DLG5Q8TDM6 1919 aa10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 TCERG1O14776 1098 aaKnown RBP10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 KCNQ2O43526 872 aa10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 FMNL2Q96PY5 1086 aa10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 ASAP1Q9ULH1 1129 aa10.94□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 BCAR3O75815 825 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 FAM196AQ6ZSG2 479 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SSH1Q8WYL5 1049 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 BCL2L13Q9BXK5 485 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 ATG3Q9NT62 314 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SMC4Q9NTJ3 1288 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 LRRC37A3O60309 1634 aa10.93□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 ZNF428Q96B54 188 aa10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 CHMP4AQ9BY43 222 aa10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 MRC1P22897 1456 aa10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SOS1Q07889 1333 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 ALDH1L2Q3SY69 923 aa10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 HDGFL1Q5TGJ6 251 aa10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 CCDC30Q5VVM6 783 aa10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 FRAT1Q92837 279 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 STK31Q9BXU1 1019 aa10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 BCL9O00512 1426 aa10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 WNK3Q9BYP7 1800 aa10.91□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 ADAMTS7Q9UKP4 1686 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 PLIN1O60240 522 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 NEFLP07196 543 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 HOXB7P09629 217 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 PTF1AQ7RTS3 328 aa10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-MDP1-201ENST00000530579 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 RRP1P56182 461 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 TEX13AQ9BXU3 409 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 HEG1Q9ULI3 1381 aa10.89□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 SCN11AQ9UI33 1791 aa10.88□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 RGS12O14924 1447 aa10.88□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 IPO8O15397 1037 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 TRIM37O94972 964 aa10.88□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 NOB1Q9ULX3 412 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 USP16Q9Y5T5 823 aa10.88□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 STARD3NLO95772 234 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 ZKSCAN2Q63HK3 967 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 DNAJC10Q8IXB1 793 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 VSIG10Q8N0Z9 540 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 CHPF2Q9P2E5 772 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 KIF16BQ96L93 1317 aa10.86□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 LOC102724428A0A0B4J2F2 783 aa10.86□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 SIK1P57059 783 aa10.86□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 DBF4Q9UBU7 674 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 TOGARAM1Q9Y4F4 1720 aa10.86□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 RNF123Q5XPI4 1314 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 ANXA1P04083 346 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 A1BGP04217 495 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 MS4A1P11836 297 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 MYL6BP14649 208 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 FKBP8Q14318 412 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 G2E3Q7L622 706 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 SLC4A9Q96Q91 983 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 HYPKQ9NX55 129 aa10.85□□□□□ -0.67
NEDD8-MDP1-201ENST00000530579 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms