RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 SYTL4Q96C24 671 aaPredicted RBP11.44□□□□□ -0.58
CTSF-208ENST00000530565 GRIN3BO60391 1043 aa11.43□□□□□ -0.58
CTSF-208ENST00000530565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTSF-208ENST00000530565 CCNL1Q9UK58 526 aaPredicted RBP11.43□□□□□ -0.58
CTSF-208ENST00000530565 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
CTSF-208ENST00000530565 PCDH11XQ9BZA7 1347 aa11.42□□□□□ -0.58
CTSF-208ENST00000530565 PCDH11YQ9BZA8 1340 aa11.42□□□□□ -0.58
CTSF-208ENST00000530565 CCDC184Q52MB2 194 aa11.42□□□□□ -0.58
CTSF-208ENST00000530565 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
CTSF-208ENST00000530565 C4BP0C0L5 1744 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 UBR3Q6ZT12 1888 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 FCHSD2O94868 740 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 PRKAR2BP31323 418 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
CTSF-208ENST00000530565 MSL1Q68DK7 614 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 MIER1Q8N108 512 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 ITGB4P16144 1822 aa11.41□□□□□ -0.58
CTSF-208ENST00000530565 CYP27B1O15528 508 aa11.4□□□□□ -0.58
CTSF-208ENST00000530565 WDR43Q15061 677 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTSF-208ENST00000530565 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
CTSF-208ENST00000530565 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
CTSF-208ENST00000530565 CD2APQ9Y5K6 639 aa11.4□□□□□ -0.58
CTSF-208ENST00000530565 PHKG2P15735 406 aa11.39□□□□□ -0.59
CTSF-208ENST00000530565 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
CTSF-208ENST00000530565 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
CTSF-208ENST00000530565 KIAA1551Q9HCM1 1747 aa11.38□□□□□ -0.59
CTSF-208ENST00000530565 MSH5O43196 834 aa11.38□□□□□ -0.59
CTSF-208ENST00000530565 MTHFSDQ2M296 383 aaKnown RBP11.38□□□□□ -0.59
CTSF-208ENST00000530565 ZNF530Q6P9A1 599 aaPredicted RBP11.38□□□□□ -0.59
CTSF-208ENST00000530565 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
CTSF-208ENST00000530565 CCER2I3L3R5 266 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 HSPA6P17066 643 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
CTSF-208ENST00000530565 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 PNISRQ8TF01 805 aaKnown RBP11.37□□□□□ -0.59
CTSF-208ENST00000530565 PHACTR3Q96KR7 559 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 PLEKHF1Q96S99 279 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
CTSF-208ENST00000530565 ADAMTS8Q9UP79 889 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 PALLDQ8WX93 1383 aa11.37□□□□□ -0.59
CTSF-208ENST00000530565 NEFMP07197 916 aa11.36□□□□□ -0.59
CTSF-208ENST00000530565 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
CTSF-208ENST00000530565 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
CTSF-208ENST00000530565 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
CTSF-208ENST00000530565 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
CTSF-208ENST00000530565 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
CTSF-208ENST00000530565 SMIM5Q71RC9 77 aa11.35□□□□□ -0.59
CTSF-208ENST00000530565 FLAD1Q8NFF5 587 aa11.35□□□□□ -0.59
CTSF-208ENST00000530565 ZNF526Q8TF50 670 aaPredicted RBP11.35□□□□□ -0.59
CTSF-208ENST00000530565 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
CTSF-208ENST00000530565 KIF3CO14782 793 aa11.34□□□□□ -0.59
CTSF-208ENST00000530565 CCDC146Q8IYE0 955 aa11.34□□□□□ -0.59
CTSF-208ENST00000530565 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
CTSF-208ENST00000530565 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
CTSF-208ENST00000530565 SCN11AQ9UI33 1791 aa11.33□□□□□ -0.59
CTSF-208ENST00000530565 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.6
CTSF-208ENST00000530565 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
CTSF-208ENST00000530565 MPRIPQ6WCQ1 1025 aa11.33□□□□□ -0.6
CTSF-208ENST00000530565 RUNDC1Q96C34 613 aa11.33□□□□□ -0.6
CTSF-208ENST00000530565 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
CTSF-208ENST00000530565 NFE2L2Q16236 605 aa11.32□□□□□ -0.6
CTSF-208ENST00000530565 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
CTSF-208ENST00000530565 N4BP2Q86UW6 1770 aaPredicted RBP11.31□□□□□ -0.6
CTSF-208ENST00000530565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
CTSF-208ENST00000530565 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
CTSF-208ENST00000530565 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
CTSF-208ENST00000530565 FAM9BQ8IZU0 186 aa11.31□□□□□ -0.6
CTSF-208ENST00000530565 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
CTSF-208ENST00000530565 AK7Q96M32 723 aa11.31□□□□□ -0.6
CTSF-208ENST00000530565 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
CTSF-208ENST00000530565 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
CTSF-208ENST00000530565 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
CTSF-208ENST00000530565 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
CTSF-208ENST00000530565 PHF14O94880 888 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 SSFA2P28290 1259 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
CTSF-208ENST00000530565 CABP4P57796 275 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 PIGBQ92521 554 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 SMARCC1Q92922 1105 aaPredicted RBP11.3□□□□□ -0.6
CTSF-208ENST00000530565 TMOD3Q9NYL9 352 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 MRC1P22897 1456 aa11.3□□□□□ -0.6
CTSF-208ENST00000530565 RIPK4P57078 832 aa11.29□□□□□ -0.6
CTSF-208ENST00000530565 RTF1Q92541 710 aaKnown RBP11.29□□□□□ -0.6
CTSF-208ENST00000530565 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 ZNF831Q5JPB2 1677 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 APAF1O14727 1248 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
CTSF-208ENST00000530565 SIK1P57059 783 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 ITPK1Q13572 414 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 MCM10Q7L590 875 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 SLC52A2Q9HAB3 445 aa11.28□□□□□ -0.6
CTSF-208ENST00000530565 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
CTSF-208ENST00000530565 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
CTSF-208ENST00000530565 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms