RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 ZNF831Q5JPB2 1677 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 CICQ96RK0 1608 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-218ENST00000530442 C5P01031 1676 aa14.5□□□□□ -0.09
CAPN1-218ENST00000530442 EN1Q05925 392 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-218ENST00000530442 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
CAPN1-218ENST00000530442 MCM10Q7L590 875 aa14.5□□□□□ -0.09
CAPN1-218ENST00000530442 SLC52A2Q9HAB3 445 aa14.5□□□□□ -0.09
CAPN1-218ENST00000530442 KCPQ6ZWJ8 1503 aa14.5□□□□□ -0.09
CAPN1-218ENST00000530442 TJP1Q07157 1748 aa14.49□□□□□ -0.09
CAPN1-218ENST00000530442 PALLDQ8WX93 1383 aa14.49□□□□□ -0.09
CAPN1-218ENST00000530442 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
CAPN1-218ENST00000530442 COL5A3P25940 1745 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-218ENST00000530442 APAF1O14727 1248 aa14.48□□□□□ -0.09
CAPN1-218ENST00000530442 PLSCR1O15162 318 aa14.48□□□□□ -0.09
CAPN1-218ENST00000530442 RIPK4P57078 832 aa14.48□□□□□ -0.09
CAPN1-218ENST00000530442 CABP4P57796 275 aa14.48□□□□□ -0.09
CAPN1-218ENST00000530442 EZH2Q15910 746 aaKnown RBP14.48□□□□□ -0.09
CAPN1-218ENST00000530442 NFATC2IPQ8NCF5 419 aa14.48□□□□□ -0.09
CAPN1-218ENST00000530442 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
CAPN1-218ENST00000530442 CAMKK2Q96RR4 588 aa14.48□□□□□ -0.09
CAPN1-218ENST00000530442 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
CAPN1-218ENST00000530442 THUMPD2Q9BTF0 503 aaKnown RBP14.47□□□□□ -0.09
CAPN1-218ENST00000530442 ASAP1Q9ULH1 1129 aa14.47□□□□□ -0.09
CAPN1-218ENST00000530442 TRIM35Q9UPQ4 493 aa14.47□□□□□ -0.09
CAPN1-218ENST00000530442 TUBGCP6Q96RT7 1819 aa14.47□□□□□ -0.09
CAPN1-218ENST00000530442 SENP3-EIF4A1A0A087X0R7 540 aa14.46□□□□□ -0.09
CAPN1-218ENST00000530442 TEFQ10587 303 aa14.46□□□□□ -0.09
CAPN1-218ENST00000530442 ATG3Q9NT62 314 aa14.46□□□□□ -0.09
CAPN1-218ENST00000530442 LMOD3Q0VAK6 560 aa14.45□□□□□ -0.1
CAPN1-218ENST00000530442 PROM2Q8N271 834 aa14.45□□□□□ -0.1
CAPN1-218ENST00000530442 LAMB4A4D0S4 1761 aa14.45□□□□□ -0.1
CAPN1-218ENST00000530442 C4BP0C0L5 1744 aa14.44□□□□□ -0.1
CAPN1-218ENST00000530442 TXNRD1Q16881 649 aa14.44□□□□□ -0.1
CAPN1-218ENST00000530442 SLC39A6Q13433 755 aa14.43□□□□□ -0.1
CAPN1-218ENST00000530442 SMARCC1Q92922 1105 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-218ENST00000530442 QSER1Q2KHR3 1735 aa14.43□□□□□ -0.1
CAPN1-218ENST00000530442 LRRC4BQ9NT99 713 aa14.42□□□□□ -0.1
CAPN1-218ENST00000530442 LOC102724428A0A0B4J2F2 783 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 KCNQ4P56696 695 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 SIK1P57059 783 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 CCDC27Q2M243 656 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 SLC27A3Q5K4L6 730 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 SLC4A9Q96Q91 983 aa14.41□□□□□ -0.1
CAPN1-218ENST00000530442 CCNL1Q9UK58 526 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-218ENST00000530442 UBR3Q6ZT12 1888 aa14.4□□□□□ -0.1
CAPN1-218ENST00000530442 KCNQ3O43525 872 aa14.4□□□□□ -0.1
CAPN1-218ENST00000530442 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
CAPN1-218ENST00000530442 ZNF790Q6PG37 636 aa14.4□□□□□ -0.1
CAPN1-218ENST00000530442 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-218ENST00000530442 MYH14Q7Z406 1995 aaKnown RBP14.4□□□□□ -0.1
CAPN1-218ENST00000530442 ITPK1Q13572 414 aa14.39□□□□□ -0.11
CAPN1-218ENST00000530442 TAF7Q15545 349 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-218ENST00000530442 CASZ1Q86V15 1759 aa14.38□□□□□ -0.11
CAPN1-218ENST00000530442 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
CAPN1-218ENST00000530442 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
CAPN1-218ENST00000530442 TTC5Q8N0Z6 440 aa14.38□□□□□ -0.11
CAPN1-218ENST00000530442 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
CAPN1-218ENST00000530442 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
CAPN1-218ENST00000530442 SALL2Q9Y467 1007 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-218ENST00000530442 HEG1Q9ULI3 1381 aa14.37□□□□□ -0.11
CAPN1-218ENST00000530442 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
CAPN1-218ENST00000530442 ZNF496Q96IT1 587 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-218ENST00000530442 ZNF521Q96K83 1311 aa14.37□□□□□ -0.11
CAPN1-218ENST00000530442 C4AP0C0L4 1744 aa14.36□□□□□ -0.11
CAPN1-218ENST00000530442 ZNF827Q17R98 1081 aa14.36□□□□□ -0.11
CAPN1-218ENST00000530442 LINC00116Q8NCU8 138 aa14.36□□□□□ -0.11
CAPN1-218ENST00000530442 TSPYL4Q9UJ04 414 aa14.36□□□□□ -0.11
CAPN1-218ENST00000530442 ZNF853P0CG23 659 aa14.35□□□□□ -0.11
CAPN1-218ENST00000530442 FMNL2Q96PY5 1086 aa14.35□□□□□ -0.11
CAPN1-218ENST00000530442 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
CAPN1-218ENST00000530442 BABAM1Q9NWV8 329 aa14.35□□□□□ -0.11
CAPN1-218ENST00000530442 CHL1O00533 1208 aa14.34□□□□□ -0.11
CAPN1-218ENST00000530442 CALD1Q05682 793 aaKnown RBP14.34□□□□□ -0.11
CAPN1-218ENST00000530442 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
CAPN1-218ENST00000530442 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
CAPN1-218ENST00000530442 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
CAPN1-218ENST00000530442 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
CAPN1-218ENST00000530442 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
CAPN1-218ENST00000530442 LAS1LQ9Y4W2 734 aaKnown RBP14.34□□□□□ -0.11
CAPN1-218ENST00000530442 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
CAPN1-218ENST00000530442 EIF4A1P60842 406 aaKnown RBP14.33□□□□□ -0.12
CAPN1-218ENST00000530442 MBIPQ9NS73 344 aa14.33□□□□□ -0.12
CAPN1-218ENST00000530442 IL16Q14005 1332 aa14.33□□□□□ -0.12
CAPN1-218ENST00000530442 CNTNAP4Q9C0A0 1308 aa14.33□□□□□ -0.12
CAPN1-218ENST00000530442 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
CAPN1-218ENST00000530442 STK32BQ9NY57 414 aa14.32□□□□□ -0.12
CAPN1-218ENST00000530442 GNAI1P63096 354 aa14.31□□□□□ -0.12
CAPN1-218ENST00000530442 NBPF14Q5TI25 921 aa14.31□□□□□ -0.12
CAPN1-218ENST00000530442 AMIGO3Q86WK7 504 aa14.31□□□□□ -0.12
CAPN1-218ENST00000530442 WDR63Q8IWG1 891 aa14.31□□□□□ -0.12
CAPN1-218ENST00000530442 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-218ENST00000530442 PSDA5PKW4 1024 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-218ENST00000530442 CYP19A1P11511 503 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-218ENST00000530442 CRKLP46109 303 aaKnown RBP14.3□□□□□ -0.12
CAPN1-218ENST00000530442 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
CAPN1-218ENST00000530442 KRT24Q2M2I5 525 aa14.3□□□□□ -0.12
CAPN1-218ENST00000530442 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
CAPN1-218ENST00000530442 AK7Q96M32 723 aa14.3□□□□□ -0.12
CAPN1-218ENST00000530442 FANCIQ9NVI1 1328 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms