RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 ST18O60284 1047 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 REC8O95072 547 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 PPP4R3CPQ6ZMV5 832 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 NAP1L5Q96NT1 182 aaPredicted RBP11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 PRPF40AO75400 957 aaKnown RBP11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
TRIM49D1-202ENST00000530311 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 FLT4P35916 1363 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 NEK4P51957 841 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 NLRP6P59044 892 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 UNC5CLQ8IV45 518 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 RILPL2Q969X0 211 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 LRRFIP2Q9Y608 721 aaKnown RBP11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 SALL3Q9BXA9 1300 aa11.32□□□□□ -0.6
TRIM49D1-202ENST00000530311 NASPP49321 788 aaPredicted RBP11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 TRIM44Q96DX7 344 aaPredicted RBP11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 LRRCC1Q9C099 1032 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 KDRP35968 1356 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 ZSCAN23Q3MJ62 389 aa11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 NSFL1CQ9UNZ2 370 aaKnown RBP11.31□□□□□ -0.6
TRIM49D1-202ENST00000530311 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 MX1P20591 662 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 CCDC30Q5VVM6 783 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 IL1RAPL2Q9NP60 686 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 CHMLP26374 656 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 IL25Q9H293 177 aa11.3□□□□□ -0.6
TRIM49D1-202ENST00000530311 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
TRIM49D1-202ENST00000530311 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
TRIM49D1-202ENST00000530311 HOXC9P31274 260 aa11.29□□□□□ -0.6
TRIM49D1-202ENST00000530311 RBSNQ9H1K0 784 aa11.29□□□□□ -0.6
TRIM49D1-202ENST00000530311 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
TRIM49D1-202ENST00000530311 EID1Q9Y6B2 187 aa11.29□□□□□ -0.6
TRIM49D1-202ENST00000530311 GNAI3P08754 354 aa11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 ZNF445P59923 1031 aa11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 PPP1R9BQ96SB3 815 aa11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
TRIM49D1-202ENST00000530311 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.6
TRIM49D1-202ENST00000530311 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.6
TRIM49D1-202ENST00000530311 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.6
TRIM49D1-202ENST00000530311 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.6
TRIM49D1-202ENST00000530311 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
TRIM49D1-202ENST00000530311 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
TRIM49D1-202ENST00000530311 CCDC173Q0VFZ6 552 aa11.27□□□□□ -0.61
TRIM49D1-202ENST00000530311 TMEM63CQ9P1W3 806 aa11.27□□□□□ -0.61
TRIM49D1-202ENST00000530311 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 TBX22Q9Y458 520 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 FMN2Q9NZ56 1722 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 HDGFL1Q5TGJ6 251 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 RBM33Q96EV2 1170 aaKnown RBP11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 LGR6Q9HBX8 967 aa11.26□□□□□ -0.61
TRIM49D1-202ENST00000530311 KCNQ3O43525 872 aa11.25□□□□□ -0.61
TRIM49D1-202ENST00000530311 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
TRIM49D1-202ENST00000530311 ANXA1P04083 346 aa11.25□□□□□ -0.61
TRIM49D1-202ENST00000530311 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
TRIM49D1-202ENST00000530311 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
TRIM49D1-202ENST00000530311 MAP3K5Q99683 1374 aa11.25□□□□□ -0.61
TRIM49D1-202ENST00000530311 SYCE3A1L190 88 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 NBPF7P0C2Y1 421 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 KCNA6P17658 529 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 CUL4AQ13619 759 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 BRD1O95696 1058 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 MCCP23508 829 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 XRN1Q8IZH2 1706 aaKnown RBP11.24□□□□□ -0.61
TRIM49D1-202ENST00000530311 NWD1Q149M9 1564 aa11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 ZBTB7CA1YPR0 619 aa11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 DTNBO60941 627 aa11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms