RNA–Protein interactions for RNA: ENST00000530167.1

H2AFX-202, Transcript of H2A histone family member X, humanhuman

APPRIS P1 BASIC

Gene H2AFX, Length 1,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-202ENST00000530167 EP400Q96L91 3159 aa27.54■■■□□ 2
H2AFX-202ENST00000530167 BCL11BQ9C0K0 894 aaPredicted RBP27.53■■■□□ 2
H2AFX-202ENST00000530167 SIPA1L3O60292 1781 aaPredicted RBP27.52■■■□□ 2
H2AFX-202ENST00000530167 CALD1Q05682 793 aaKnown RBP27.51■■□□□ 1.99
H2AFX-202ENST00000530167 TAF7Q15545 349 aaPredicted RBP27.51■■□□□ 1.99
H2AFX-202ENST00000530167 LAS1LQ9Y4W2 734 aaKnown RBP27.49■■□□□ 1.99
H2AFX-202ENST00000530167 BTAF1O14981 1849 aa27.49■■□□□ 1.99
H2AFX-202ENST00000530167 ZNF521Q96K83 1311 aa27.49■■□□□ 1.99
H2AFX-202ENST00000530167 BTBD11A6QL63 1104 aa27.49■■□□□ 1.99
H2AFX-202ENST00000530167 WDR63Q8IWG1 891 aa27.49■■□□□ 1.99
H2AFX-202ENST00000530167 YTHDC1Q96MU7 727 aaKnown RBP27.49■■□□□ 1.99
H2AFX-202ENST00000530167 MIS18AQ9NYP9 233 aa27.47■■□□□ 1.99
H2AFX-202ENST00000530167 SLC39A6Q13433 755 aa27.46■■□□□ 1.99
H2AFX-202ENST00000530167 ASAP1Q9ULH1 1129 aa27.46■■□□□ 1.99
H2AFX-202ENST00000530167 CFAP44Q96MT7 982 aa27.45■■□□□ 1.98
H2AFX-202ENST00000530167 ATG3Q9NT62 314 aa27.45■■□□□ 1.98
H2AFX-202ENST00000530167 TNS1Q9HBL0 1735 aaKnown RBP27.44■■□□□ 1.98
H2AFX-202ENST00000530167 IFT57Q9NWB7 429 aa27.44■■□□□ 1.98
H2AFX-202ENST00000530167 TSPYL4Q9UJ04 414 aa27.44■■□□□ 1.98
H2AFX-202ENST00000530167 IL16Q14005 1332 aa27.44■■□□□ 1.98
H2AFX-202ENST00000530167 APBA3O96018 575 aa27.43■■□□□ 1.98
H2AFX-202ENST00000530167 GNAI1P63096 354 aa27.43■■□□□ 1.98
H2AFX-202ENST00000530167 ZBED9Q6R2W3 1325 aa27.43■■□□□ 1.98
H2AFX-202ENST00000530167 GOLGA2Q08379 1002 aa27.42■■□□□ 1.98
H2AFX-202ENST00000530167 ZNF790Q6PG37 636 aa27.42■■□□□ 1.98
H2AFX-202ENST00000530167 CHL1O00533 1208 aa27.41■■□□□ 1.98
H2AFX-202ENST00000530167 ZNF853P0CG23 659 aa27.41■■□□□ 1.98
H2AFX-202ENST00000530167 SF3B2Q13435 895 aaKnown RBP27.41■■□□□ 1.98
H2AFX-202ENST00000530167 TTC5Q8N0Z6 440 aa27.41■■□□□ 1.98
H2AFX-202ENST00000530167 BABAM1Q9NWV8 329 aa27.41■■□□□ 1.98
H2AFX-202ENST00000530167 PAPPAQ13219 1627 aa27.41■■□□□ 1.98
H2AFX-202ENST00000530167 KCNQ3O43525 872 aa27.41■■□□□ 1.98
H2AFX-202ENST00000530167 SMARCC1Q92922 1105 aaPredicted RBP27.41■■□□□ 1.98
H2AFX-202ENST00000530167 KDM3BQ7LBC6 1761 aa27.4■■□□□ 1.98
H2AFX-202ENST00000530167 PALLDQ8WX93 1383 aa27.4■■□□□ 1.98
H2AFX-202ENST00000530167 SPINK5Q9NQ38 1064 aaPredicted RBP27.4■■□□□ 1.98
H2AFX-202ENST00000530167 MBIPQ9NS73 344 aa27.39■■□□□ 1.98
H2AFX-202ENST00000530167 CCDC125Q86Z20 511 aa27.38■■□□□ 1.97
H2AFX-202ENST00000530167 PTCD1O75127 700 aaKnown RBP27.38■■□□□ 1.97
H2AFX-202ENST00000530167 UPF1Q92900 1129 aaKnown RBP eCLIP27.38■■□□□ 1.971e-12■■■■■ 49.9
H2AFX-202ENST00000530167 CDCA7LQ96GN5 454 aa27.37■■□□□ 1.97
H2AFX-202ENST00000530167 TSR2Q969E8 191 aaKnown RBP27.36■■□□□ 1.97
H2AFX-202ENST00000530167 RBM42Q9BTD8 480 aaKnown RBP27.36■■□□□ 1.97
H2AFX-202ENST00000530167 UBR2Q8IWV8 1755 aa27.36■■□□□ 1.97
H2AFX-202ENST00000530167 PLSCR1O15162 318 aa27.35■■□□□ 1.97
H2AFX-202ENST00000530167 ZNF496Q96IT1 587 aaPredicted RBP27.35■■□□□ 1.97
H2AFX-202ENST00000530167 MYH16Q9H6N6 1097 aa27.35■■□□□ 1.97
H2AFX-202ENST00000530167 KCPQ6ZWJ8 1503 aa27.35■■□□□ 1.97
H2AFX-202ENST00000530167 E9PSI1 815 aa27.34■■□□□ 1.97
H2AFX-202ENST00000530167 BAG6P46379 1132 aa27.34■■□□□ 1.97
H2AFX-202ENST00000530167 SLFN5Q08AF3 891 aa27.34■■□□□ 1.97
H2AFX-202ENST00000530167 LY75O60449 1722 aa27.33■■□□□ 1.97
H2AFX-202ENST00000530167 FANCIQ9NVI1 1328 aa27.33■■□□□ 1.97
H2AFX-202ENST00000530167 EIF4A1P60842 406 aaKnown RBP27.33■■□□□ 1.97
H2AFX-202ENST00000530167 FMNL2Q96PY5 1086 aa27.33■■□□□ 1.97
H2AFX-202ENST00000530167 LOC102724428A0A0B4J2F2 783 aa27.32■■□□□ 1.96
H2AFX-202ENST00000530167 SIK1P57059 783 aa27.32■■□□□ 1.96
H2AFX-202ENST00000530167 EN1Q05925 392 aaPredicted RBP27.32■■□□□ 1.96
H2AFX-202ENST00000530167 DEFB132Q7Z7B7 95 aa27.31■■□□□ 1.96
H2AFX-202ENST00000530167 HEG1Q9ULI3 1381 aa27.3■■□□□ 1.96
H2AFX-202ENST00000530167 SLC4A9Q96Q91 983 aa27.3■■□□□ 1.96
H2AFX-202ENST00000530167 RGPD3A6NKT7 1758 aaPredicted RBP27.29■■□□□ 1.96
H2AFX-202ENST00000530167 RGPD4Q7Z3J3 1758 aa27.29■■□□□ 1.96
H2AFX-202ENST00000530167 ATP6V1AP38606 617 aa27.29■■□□□ 1.96
H2AFX-202ENST00000530167 CCNL1Q9UK58 526 aaPredicted RBP27.29■■□□□ 1.96
H2AFX-202ENST00000530167 KCNQ4P56696 695 aa27.28■■□□□ 1.96
H2AFX-202ENST00000530167 TXNRD1Q16881 649 aa27.28■■□□□ 1.96
H2AFX-202ENST00000530167 KRT24Q2M2I5 525 aa27.28■■□□□ 1.96
H2AFX-202ENST00000530167 EZH2Q15910 746 aaKnown RBP27.27■■□□□ 1.96
H2AFX-202ENST00000530167 CAMKK2Q96RR4 588 aa27.27■■□□□ 1.96
H2AFX-202ENST00000530167 TRMT2AQ8IZ69 625 aaKnown RBP27.27■■□□□ 1.96
H2AFX-202ENST00000530167 VSIG10Q8N0Z9 540 aa27.27■■□□□ 1.96
H2AFX-202ENST00000530167 PROM2Q8N271 834 aa27.27■■□□□ 1.96
H2AFX-202ENST00000530167 SNRPA1P09661 255 aaKnown RBP27.26■■□□□ 1.95
H2AFX-202ENST00000530167 SLC27A3Q5K4L6 730 aa27.26■■□□□ 1.95
H2AFX-202ENST00000530167 GIGYF1O75420 1035 aaPredicted RBP27.25■■□□□ 1.95
H2AFX-202ENST00000530167 DUSP27Q5VZP5 1158 aa27.25■■□□□ 1.95
H2AFX-202ENST00000530167 PRAMEF22A3QJZ6 481 aa27.24■■□□□ 1.95
H2AFX-202ENST00000530167 EXOSC9Q06265 439 aaKnown RBP27.24■■□□□ 1.95
H2AFX-202ENST00000530167 ITPK1Q13572 414 aa27.24■■□□□ 1.95
H2AFX-202ENST00000530167 C8orf58Q8NAV2 365 aa27.24■■□□□ 1.95
H2AFX-202ENST00000530167 LRRC4BQ9NT99 713 aa27.24■■□□□ 1.95
H2AFX-202ENST00000530167 ZNF831Q5JPB2 1677 aa27.24■■□□□ 1.95
H2AFX-202ENST00000530167 ELL2O00472 640 aaPredicted RBP27.23■■□□□ 1.95
H2AFX-202ENST00000530167 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
H2AFX-202ENST00000530167 TJP1Q07157 1748 aa27.23■■□□□ 1.95
H2AFX-202ENST00000530167 C5P01031 1676 aa27.22■■□□□ 1.95
H2AFX-202ENST00000530167 TSPYL6Q8N831 410 aa27.21■■□□□ 1.95
H2AFX-202ENST00000530167 TEX13AQ9BXU3 409 aaPredicted RBP27.21■■□□□ 1.95
H2AFX-202ENST00000530167 CICQ96RK0 1608 aaPredicted RBP27.2■■□□□ 1.95
H2AFX-202ENST00000530167 USP16Q9Y5T5 823 aa27.2■■□□□ 1.95
H2AFX-202ENST00000530167 TWISTNBQ3B726 338 aaPredicted RBP27.19■■□□□ 1.94
H2AFX-202ENST00000530167 TAF1LQ8IZX4 1826 aa27.19■■□□□ 1.94
H2AFX-202ENST00000530167 LINC00116Q8NCU8 138 aa27.19■■□□□ 1.94
H2AFX-202ENST00000530167 RREB1Q92766 1687 aa27.18■■□□□ 1.94
H2AFX-202ENST00000530167 HOXB7P09629 217 aa27.18■■□□□ 1.94
H2AFX-202ENST00000530167 STARD3NLO95772 234 aa27.17■■□□□ 1.94
H2AFX-202ENST00000530167 EIF2S2P20042 333 aaKnown RBP27.17■■□□□ 1.94
H2AFX-202ENST00000530167 LAMB4A4D0S4 1761 aa27.17■■□□□ 1.94
H2AFX-202ENST00000530167 COL5A3P25940 1745 aaPredicted RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms