RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
SNRNP35-206ENST00000529904 PNNQ9H307 717 aaKnown RBP16.77■□□□□ 0.28
SNRNP35-206ENST00000529904 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
SNRNP35-206ENST00000529904 C5P01031 1676 aa16.76■□□□□ 0.27
SNRNP35-206ENST00000529904 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
SNRNP35-206ENST00000529904 LRP5O75197 1615 aa16.75■□□□□ 0.27
SNRNP35-206ENST00000529904 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
SNRNP35-206ENST00000529904 MRC1P22897 1456 aa16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 TEFQ10587 303 aa16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
SNRNP35-206ENST00000529904 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 AK7Q96M32 723 aa16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
SNRNP35-206ENST00000529904 PNPLA7Q6ZV29 1317 aa16.71■□□□□ 0.27
SNRNP35-206ENST00000529904 C4BP0C0L5 1744 aa16.71■□□□□ 0.27
SNRNP35-206ENST00000529904 MSH5O43196 834 aa16.71■□□□□ 0.27
SNRNP35-206ENST00000529904 ITPK1Q13572 414 aa16.71■□□□□ 0.27
SNRNP35-206ENST00000529904 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
SNRNP35-206ENST00000529904 PLEKHF1Q96S99 279 aa16.71■□□□□ 0.27
SNRNP35-206ENST00000529904 QSER1Q2KHR3 1735 aa16.7■□□□□ 0.26
SNRNP35-206ENST00000529904 ANP32CO43423 234 aa16.7■□□□□ 0.26
SNRNP35-206ENST00000529904 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
SNRNP35-206ENST00000529904 MTFR1LQ9H019 292 aa16.7■□□□□ 0.26
SNRNP35-206ENST00000529904 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
SNRNP35-206ENST00000529904 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 MCM10Q7L590 875 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 TTC5Q8N0Z6 440 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
SNRNP35-206ENST00000529904 NFE2L2Q16236 605 aa16.68■□□□□ 0.26
SNRNP35-206ENST00000529904 SLC16A10Q8TF71 515 aa16.68■□□□□ 0.26
SNRNP35-206ENST00000529904 GNPATO15228 680 aa16.67■□□□□ 0.26
SNRNP35-206ENST00000529904 PHF14O94880 888 aa16.67■□□□□ 0.26
SNRNP35-206ENST00000529904 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
SNRNP35-206ENST00000529904 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
SNRNP35-206ENST00000529904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 SSFA2P28290 1259 aa16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
SNRNP35-206ENST00000529904 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
SNRNP35-206ENST00000529904 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
SNRNP35-206ENST00000529904 RTCBQ9Y3I0 505 aaKnown RBP16.64■□□□□ 0.25
SNRNP35-206ENST00000529904 KCPQ6ZWJ8 1503 aa16.64■□□□□ 0.25
SNRNP35-206ENST00000529904 CNTNAP4Q9C0A0 1308 aa16.64■□□□□ 0.25
SNRNP35-206ENST00000529904 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 DLG5Q8TDM6 1919 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 TJP1Q07157 1748 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 PTGER2P43116 358 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 RIPK4P57078 832 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 SMIM5Q71RC9 77 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
SNRNP35-206ENST00000529904 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 POLD1P28340 1107 aa16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 VSIG10Q8N0Z9 540 aa16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
SNRNP35-206ENST00000529904 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
SNRNP35-206ENST00000529904 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
SNRNP35-206ENST00000529904 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
SNRNP35-206ENST00000529904 TRAPPC3LQ5T215 181 aa16.61■□□□□ 0.25
SNRNP35-206ENST00000529904 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
SNRNP35-206ENST00000529904 NEUROD2Q15784 382 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 SGIP1Q9BQI5 828 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 CCDC87Q9NVE4 849 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 RRP7AQ9Y3A4 280 aaKnown RBP16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 HEG1Q9ULI3 1381 aa16.6■□□□□ 0.25
SNRNP35-206ENST00000529904 KCNQ3O43525 872 aa16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 STARD3NLO95772 234 aa16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 ADRA2BP18089 450 aa16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 ARXQ96QS3 562 aa16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
SNRNP35-206ENST00000529904 RFC4P35249 363 aa16.58■□□□□ 0.24
SNRNP35-206ENST00000529904 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
SNRNP35-206ENST00000529904 ARHGEF1Q92888 912 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms